RNA–Protein interactions for RNA: ENST00000534724.1

PHF21A-220, Transcript of PHD finger protein 21A, humanhuman

TSL 5

Gene PHF21A, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF21A-220ENST00000534724 AEBP2Q6ZN18 517 aaPredicted RBP20.56■□□□□ 0.88
PHF21A-220ENST00000534724 CHIC1Q5VXU3 224 aa20.14■□□□□ 0.81
PHF21A-220ENST00000534724 PHF23Q9BUL5 403 aaPredicted RBP17.66■□□□□ 0.42
PHF21A-220ENST00000534724 SENP3Q9H4L4 574 aaPredicted RBP17.56■□□□□ 0.4
PHF21A-220ENST00000534724 PLPPR3Q6T4P5 718 aa16.41■□□□□ 0.22
PHF21A-220ENST00000534724 FOXD1Q16676 465 aa16.23■□□□□ 0.19
PHF21A-220ENST00000534724 ADRA2BP18089 450 aa15.61■□□□□ 0.09
PHF21A-220ENST00000534724 PPP6R1Q9UPN7 881 aa15.58■□□□□ 0.08
PHF21A-220ENST00000534724 PIAS4Q8N2W9 510 aaPredicted RBP15.38■□□□□ 0.05
PHF21A-220ENST00000534724 MSH5O43196 834 aa15.05■□□□□ -0
PHF21A-220ENST00000534724 POTEDQ86YR6 584 aa15.01□□□□□ -0.01
PHF21A-220ENST00000534724 PPP4R3CPQ6ZMV5 832 aa14.44□□□□□ -0.1
PHF21A-220ENST00000534724 SCAF1Q9H7N4 1312 aaKnown RBP14.41□□□□□ -0.1
PHF21A-220ENST00000534724 MAPK8IP2Q13387 824 aaPredicted RBP14.15□□□□□ -0.14
PHF21A-220ENST00000534724 NCBP3Q53F19 620 aaKnown RBP14.14□□□□□ -0.15
PHF21A-220ENST00000534724 KCNA4P22459 653 aa14.06□□□□□ -0.16
PHF21A-220ENST00000534724 CNKSR2Q8WXI2 1034 aa14.05□□□□□ -0.16
PHF21A-220ENST00000534724 DMRT2Q9Y5R5 561 aa13.98□□□□□ -0.17
PHF21A-220ENST00000534724 NPM3O75607 178 aaKnown RBP13.83□□□□□ -0.2
PHF21A-220ENST00000534724 RNF216Q9NWF9 866 aaPredicted RBP13.76□□□□□ -0.21
PHF21A-220ENST00000534724 HOXD11P31277 338 aaPredicted RBP13.68□□□□□ -0.22
PHF21A-220ENST00000534724 DCAF8L1A6NGE4 600 aa13.48□□□□□ -0.25
PHF21A-220ENST00000534724 SLC4A1APQ9BWU0 796 aaKnown RBP13.45□□□□□ -0.26
PHF21A-220ENST00000534724 DNAJC5BQ9UF47 199 aa13.38□□□□□ -0.27
PHF21A-220ENST00000534724 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.13□□□□□ -0.31
PHF21A-220ENST00000534724 EHMT2Q96KQ7 1210 aa13.07□□□□□ -0.32
PHF21A-220ENST00000534724 SLC4A2P04920 1241 aa13.02□□□□□ -0.33
PHF21A-220ENST00000534724 FOXD4L1Q9NU39 408 aa12.99□□□□□ -0.33
PHF21A-220ENST00000534724 NISCHQ9Y2I1 1504 aa12.89□□□□□ -0.35
PHF21A-220ENST00000534724 ZBTB22O15209 634 aa12.88□□□□□ -0.35
PHF21A-220ENST00000534724 CSRNP3Q8WYN3 585 aa12.85□□□□□ -0.35
PHF21A-220ENST00000534724 CACNB1Q02641 598 aaPredicted RBP12.84□□□□□ -0.35
PHF21A-220ENST00000534724 MYCNP04198 464 aaPredicted RBP12.83□□□□□ -0.36
PHF21A-220ENST00000534724 RNF39Q9H2S5 420 aa12.83□□□□□ -0.36
PHF21A-220ENST00000534724 U3KPZ7 1027 aaPredicted RBP12.82□□□□□ -0.36
PHF21A-220ENST00000534724 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.78□□□□□ -0.36
PHF21A-220ENST00000534724 HNRNPUL2Q1KMD3 747 aaKnown RBP12.78□□□□□ -0.36
PHF21A-220ENST00000534724 C1QBPQ07021 282 aaKnown RBP12.74□□□□□ -0.37
PHF21A-220ENST00000534724 SAMD1Q6SPF0 538 aaPredicted RBP12.7□□□□□ -0.38
PHF21A-220ENST00000534724 APLP2Q06481 763 aa12.68□□□□□ -0.38
PHF21A-220ENST00000534724 ATXN8OSP0DMR3 200 aa12.54□□□□□ -0.4
PHF21A-220ENST00000534724 CAPN15O75808 1086 aa12.51□□□□□ -0.41
PHF21A-220ENST00000534724 SPINK5Q9NQ38 1064 aaPredicted RBP12.47□□□□□ -0.41
PHF21A-220ENST00000534724 TRHP20396 242 aaPredicted RBP12.44□□□□□ -0.42
PHF21A-220ENST00000534724 ZNF219Q9P2Y4 722 aaPredicted RBP12.43□□□□□ -0.42
PHF21A-220ENST00000534724 ATF5Q9Y2D1 282 aaPredicted RBP12.39□□□□□ -0.43
PHF21A-220ENST00000534724 ABCB7O75027 752 aa12.22□□□□□ -0.45
PHF21A-220ENST00000534724 DSG3P32926 999 aa12.22□□□□□ -0.45
PHF21A-220ENST00000534724 POLA2Q14181 598 aa12.21□□□□□ -0.45
PHF21A-220ENST00000534724 ZBTB12Q9Y330 459 aaPredicted RBP12.06□□□□□ -0.48
PHF21A-220ENST00000534724 FBLN2P98095 1184 aa12.02□□□□□ -0.49
PHF21A-220ENST00000534724 MKRN4PQ13434 485 aaPredicted RBP11.85□□□□□ -0.51
PHF21A-220ENST00000534724 OSCARQ8IYS5 282 aa11.78□□□□□ -0.52
PHF21A-220ENST00000534724 RBM42Q9BTD8 480 aaKnown RBP11.73□□□□□ -0.53
PHF21A-220ENST00000534724 SPDYE2BA6NHP3 402 aa11.69□□□□□ -0.54
PHF21A-220ENST00000534724 SPDYE6P0CI01 402 aa11.69□□□□□ -0.54
PHF21A-220ENST00000534724 FKBP8Q14318 412 aa11.69□□□□□ -0.54
PHF21A-220ENST00000534724 SPDYE2Q495Y8 402 aa11.69□□□□□ -0.54
PHF21A-220ENST00000534724 POTEHQ6S545 545 aa11.69□□□□□ -0.54
PHF21A-220ENST00000534724 SPDYE4A6NLX3 237 aa11.68□□□□□ -0.54
PHF21A-220ENST00000534724 ZNF692Q9BU19 519 aaPredicted RBP11.67□□□□□ -0.54
PHF21A-220ENST00000534724 AKT1S1Q96B36 256 aa11.55□□□□□ -0.56
PHF21A-220ENST00000534724 SSUH2Q9Y2M2 353 aa11.54□□□□□ -0.56
PHF21A-220ENST00000534724 PABPN1Q86U42 306 aaKnown RBP eCLIP11.49□□□□□ -0.57
PHF21A-220ENST00000534724 REM2Q8IYK8 340 aaPredicted RBP11.41□□□□□ -0.58
PHF21A-220ENST00000534724 PROM2Q8N271 834 aa11.38□□□□□ -0.59
PHF21A-220ENST00000534724 SPDYE1Q8NFV5 336 aaPredicted RBP11.37□□□□□ -0.59
PHF21A-220ENST00000534724 STAG3Q9UJ98 1225 aa11.35□□□□□ -0.59
PHF21A-220ENST00000534724 CLEC11AQ9Y240 323 aa11.34□□□□□ -0.59
PHF21A-220ENST00000534724 FBXO3Q9UK99 471 aa11.33□□□□□ -0.6
PHF21A-220ENST00000534724 CCDC180Q9P1Z9 1646 aa11.33□□□□□ -0.6
PHF21A-220ENST00000534724 PITPNM1O00562 1244 aa11.27□□□□□ -0.61
PHF21A-220ENST00000534724 PRR29P0C7W0 189 aa11.23□□□□□ -0.61
PHF21A-220ENST00000534724 CHRDL2Q6WN34 429 aa11.2□□□□□ -0.62
PHF21A-220ENST00000534724 PLEKHG5O94827 1062 aa11.14□□□□□ -0.63
PHF21A-220ENST00000534724 MIER1Q8N108 512 aa11.12□□□□□ -0.63
PHF21A-220ENST00000534724 PLCD3Q8N3E9 789 aa11.12□□□□□ -0.63
PHF21A-220ENST00000534724 VASPP50552 380 aaPredicted RBP11.11□□□□□ -0.63
PHF21A-220ENST00000534724 FXR2P51116 673 aaKnown RBP eCLIP11.05□□□□□ -0.64
PHF21A-220ENST00000534724 PRKAR2AP13861 404 aaKnown RBP11.03□□□□□ -0.64
PHF21A-220ENST00000534724 PIP4P2Q8N4L2 257 aa11.03□□□□□ -0.64
PHF21A-220ENST00000534724 ZBTB47Q9UFB7 747 aaPredicted RBP11.01□□□□□ -0.65
PHF21A-220ENST00000534724 CHADLQ6NUI6 762 aa11□□□□□ -0.65
PHF21A-220ENST00000534724 KLHL34Q8N239 644 aa11□□□□□ -0.65
PHF21A-220ENST00000534724 CREBZFQ9NS37 354 aa11□□□□□ -0.65
PHF21A-220ENST00000534724 NPM1P06748 294 aaKnown RBP eCLIP10.93□□□□□ -0.66
PHF21A-220ENST00000534724 IFNLR1Q8IU57 520 aaPredicted RBP10.92□□□□□ -0.66
PHF21A-220ENST00000534724 FARP1Q9Y4F1 1045 aaPredicted RBP10.91□□□□□ -0.66
PHF21A-220ENST00000534724 SPOCK2Q92563 424 aa10.86□□□□□ -0.67
PHF21A-220ENST00000534724 MNX1P50219 401 aaPredicted RBP10.84□□□□□ -0.67
PHF21A-220ENST00000534724 ZCCHC6Q5VYS8 1495 aaKnown RBP10.8□□□□□ -0.68
PHF21A-220ENST00000534724 PAK3O75914 559 aaPredicted RBP10.77□□□□□ -0.69
PHF21A-220ENST00000534724 HAX1O00165 279 aa10.75□□□□□ -0.69
PHF21A-220ENST00000534724 FAM212AQ96EL1 285 aa10.75□□□□□ -0.69
PHF21A-220ENST00000534724 NUBP1P53384 320 aa10.74□□□□□ -0.69
PHF21A-220ENST00000534724 SP7Q8TDD2 431 aaPredicted RBP10.74□□□□□ -0.69
PHF21A-220ENST00000534724 DCAF1Q9Y4B6 1507 aa10.74□□□□□ -0.69
PHF21A-220ENST00000534724 DCAF8Q5TAQ9 597 aa10.73□□□□□ -0.69
PHF21A-220ENST00000534724 CD44P16070 742 aaKnown RBP10.72□□□□□ -0.69
PHF21A-220ENST00000534724 GSE1Q14687 1217 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms