RNA–Protein interactions for RNA: ENST00000534579.5

CTNND1-237, Transcript of catenin delta 1, humanhuman

TSL 5 BASIC

Gene CTNND1, Length 6,024 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-237ENST00000534579 TAF7LQ5H9L4 462 aa11.15□□□□□ -0.62
CTNND1-237ENST00000534579 DEKP35659 375 aaKnown RBP11.15□□□□□ -0.62
CTNND1-237ENST00000534579 CHMP3Q9Y3E7 222 aa11.15□□□□□ -0.62
CTNND1-237ENST00000534579 GORABQ5T7V8 394 aa11.15□□□□□ -0.62
CTNND1-237ENST00000534579 CCER2I3L3R5 266 aa11.15□□□□□ -0.63
CTNND1-237ENST00000534579 RGS3P49796 1198 aa11.14□□□□□ -0.63
CTNND1-237ENST00000534579 HMGXB3Q12766 1538 aa11.14□□□□□ -0.63
CTNND1-237ENST00000534579 UACAQ9BZF9 1416 aa11.14□□□□□ -0.63
CTNND1-237ENST00000534579 RALBP1Q15311 655 aa11.14□□□□□ -0.63
CTNND1-237ENST00000534579 RASSF8Q8NHQ8 419 aa11.14□□□□□ -0.63
CTNND1-237ENST00000534579 CEP89Q96ST8 783 aa11.14□□□□□ -0.63
CTNND1-237ENST00000534579 IFT140Q96RY7 1462 aa11.13□□□□□ -0.63
CTNND1-237ENST00000534579 MYOM3Q5VTT5 1437 aa11.13□□□□□ -0.63
CTNND1-237ENST00000534579 HSP90B1P14625 803 aaKnown RBP11.13□□□□□ -0.63
CTNND1-237ENST00000534579 WWC1Q8IX03 1113 aa11.13□□□□□ -0.63
CTNND1-237ENST00000534579 VGFO15240 615 aaPredicted RBP11.12□□□□□ -0.63
CTNND1-237ENST00000534579 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.12□□□□□ -0.632e-8■□□□□ 11.3
CTNND1-237ENST00000534579 CWC22Q9HCG8 908 aaKnown RBP11.12□□□□□ -0.63
CTNND1-237ENST00000534579 MARCH6O60337 910 aa11.12□□□□□ -0.63
CTNND1-237ENST00000534579 PHF23Q9BUL5 403 aaPredicted RBP11.12□□□□□ -0.63
CTNND1-237ENST00000534579 ZNF644Q9H582 1327 aaPredicted RBP11.12□□□□□ -0.63
CTNND1-237ENST00000534579 SYNJ1O43426 1573 aa11.12□□□□□ -0.63
CTNND1-237ENST00000534579 PRG4Q92954 1404 aaPredicted RBP11.12□□□□□ -0.63
CTNND1-237ENST00000534579 KLHL34Q8N239 644 aa11.11□□□□□ -0.63
CTNND1-237ENST00000534579 TOPBP1Q92547 1522 aa11.11□□□□□ -0.63
CTNND1-237ENST00000534579 APBB1O00213 710 aa11.11□□□□□ -0.63
CTNND1-237ENST00000534579 FRAT2O75474 233 aaPredicted RBP11.11□□□□□ -0.63
CTNND1-237ENST00000534579 MEX3CQ5U5Q3 659 aaKnown RBP11.11□□□□□ -0.63
CTNND1-237ENST00000534579 KIAA1211Q6ZU35 1233 aa11.11□□□□□ -0.63
CTNND1-237ENST00000534579 CUX1P39880 1505 aa11.11□□□□□ -0.63
CTNND1-237ENST00000534579 GTF2E1P29083 439 aaPredicted RBP11.1□□□□□ -0.63
CTNND1-237ENST00000534579 B4GALNT3Q6L9W6 998 aa11.1□□□□□ -0.63
CTNND1-237ENST00000534579 CREBRFQ8IUR6 639 aa11.1□□□□□ -0.63
CTNND1-237ENST00000534579 CTDP1Q9Y5B0 961 aaPredicted RBP11.1□□□□□ -0.63
CTNND1-237ENST00000534579 CALD1Q05682 793 aaKnown RBP11.1□□□□□ -0.63
CTNND1-237ENST00000534579 HSCBQ8IWL3 235 aa11.1□□□□□ -0.63
CTNND1-237ENST00000534579 AMPHP49418 695 aa11.1□□□□□ -0.63
CTNND1-237ENST00000534579 KIF21BO75037 1637 aa11.09□□□□□ -0.63
CTNND1-237ENST00000534579 ST20-MTHFSA0A0A6YYL1 179 aa11.09□□□□□ -0.63
CTNND1-237ENST00000534579 FGD6Q6ZV73 1430 aa11.09□□□□□ -0.63
CTNND1-237ENST00000534579 LTV1Q96GA3 475 aaPredicted RBP11.09□□□□□ -0.63
CTNND1-237ENST00000534579 KIF15Q9NS87 1388 aa11.08□□□□□ -0.63
CTNND1-237ENST00000534579 DHX57Q6P158 1386 aaKnown RBP11.08□□□□□ -0.64
CTNND1-237ENST00000534579 TCEAL9Q9UHQ7 104 aa11.08□□□□□ -0.64
CTNND1-237ENST00000534579 SYNJ2O15056 1496 aa11.08□□□□□ -0.64
CTNND1-237ENST00000534579 ARHGAP5Q13017 1502 aa11.08□□□□□ -0.64
CTNND1-237ENST00000534579 POLA1P09884 1462 aaPredicted RBP11.08□□□□□ -0.64
CTNND1-237ENST00000534579 SNAPC4Q5SXM2 1469 aa11.07□□□□□ -0.64
CTNND1-237ENST00000534579 CASKIN1Q8WXD9 1431 aa11.07□□□□□ -0.64
CTNND1-237ENST00000534579 TPM4P67936 248 aa11.07□□□□□ -0.64
CTNND1-237ENST00000534579 SPRYD3Q8NCJ5 442 aa11.06□□□□□ -0.64
CTNND1-237ENST00000534579 TRIM34Q9BYJ4 488 aa11.06□□□□□ -0.64
CTNND1-237ENST00000534579 MINK1Q8N4C8 1332 aaPredicted RBP11.06□□□□□ -0.64
CTNND1-237ENST00000534579 IPO8O15397 1037 aaKnown RBP11.06□□□□□ -0.64
CTNND1-237ENST00000534579 TOMM22Q9NS69 142 aa11.06□□□□□ -0.64
CTNND1-237ENST00000534579 LRRC9Q6ZRR7 1453 aa11.06□□□□□ -0.64
CTNND1-237ENST00000534579 EVC2Q86UK5 1308 aa11.05□□□□□ -0.64
CTNND1-237ENST00000534579 MSNP26038 577 aaKnown RBP11.05□□□□□ -0.64
CTNND1-237ENST00000534579 ERICH3Q5RHP9 1530 aa11.05□□□□□ -0.64
CTNND1-237ENST00000534579 CCDC146Q8IYE0 955 aa11.05□□□□□ -0.64
CTNND1-237ENST00000534579 NCOA2Q15596 1464 aa11.05□□□□□ -0.64
CTNND1-237ENST00000534579 RAD21O60216 631 aa11.05□□□□□ -0.64
CTNND1-237ENST00000534579 TOP2BQ02880 1626 aa11.05□□□□□ -0.64
CTNND1-237ENST00000534579 PHLDB1Q86UU1 1377 aa11.05□□□□□ -0.64
CTNND1-237ENST00000534579 FYCO1Q9BQS8 1478 aa11.04□□□□□ -0.64
CTNND1-237ENST00000534579 HTATSF1O43719 755 aaKnown RBP11.04□□□□□ -0.64
CTNND1-237ENST00000534579 PANK3Q9H999 370 aa11.04□□□□□ -0.64
CTNND1-237ENST00000534579 NLRP13Q86W25 1043 aa11.04□□□□□ -0.64
CTNND1-237ENST00000534579 AFAP1Q8N556 730 aa11.04□□□□□ -0.64
CTNND1-237ENST00000534579 DNMBPQ6XZF7 1577 aa11.04□□□□□ -0.64
CTNND1-237ENST00000534579 CCDC34Q96HJ3 373 aa11.03□□□□□ -0.64
CTNND1-237ENST00000534579 STK31Q9BXU1 1019 aa11.03□□□□□ -0.64
CTNND1-237ENST00000534579 GPATCH3Q96I76 525 aa11.03□□□□□ -0.64
CTNND1-237ENST00000534579 COG3Q96JB2 828 aa11.02□□□□□ -0.65
CTNND1-237ENST00000534579 ITPRIPQ8IWB1 547 aa11.02□□□□□ -0.65
CTNND1-237ENST00000534579 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.02□□□□□ -0.65
CTNND1-237ENST00000534579 USP47Q96K76 1375 aa11.02□□□□□ -0.65
CTNND1-237ENST00000534579 ANKRD50Q9ULJ7 1429 aa11.02□□□□□ -0.65
CTNND1-237ENST00000534579 BICRAQ9NZM4 1560 aa11.02□□□□□ -0.65
CTNND1-237ENST00000534579 FBXW7Q969H0 707 aa11.02□□□□□ -0.65
CTNND1-237ENST00000534579 RCAN3Q9UKA8 241 aa11.01□□□□□ -0.65
CTNND1-237ENST00000534579 CFAP44Q96MT7 982 aa11.01□□□□□ -0.65
CTNND1-237ENST00000534579 GOLGA6L1Q8N7Z2 621 aa11.01□□□□□ -0.65
CTNND1-237ENST00000534579 CHMP4AQ9BY43 222 aa11.01□□□□□ -0.65
CTNND1-237ENST00000534579 CGNL1Q0VF96 1302 aa11□□□□□ -0.65
CTNND1-237ENST00000534579 LMOD3Q0VAK6 560 aa11□□□□□ -0.65
CTNND1-237ENST00000534579 DNAJC5BQ9UF47 199 aa11□□□□□ -0.65
CTNND1-237ENST00000534579 ARAP1Q96P48 1450 aa11□□□□□ -0.65
CTNND1-237ENST00000534579 SMC4Q9NTJ3 1288 aa11□□□□□ -0.65
CTNND1-237ENST00000534579 EFCAB5A4FU69 1503 aa10.99□□□□□ -0.65
CTNND1-237ENST00000534579 PES1O00541 588 aaKnown RBP10.98□□□□□ -0.65
CTNND1-237ENST00000534579 LAMC3Q9Y6N6 1575 aa10.98□□□□□ -0.65
CTNND1-237ENST00000534579 EVA1CP58658 441 aa10.98□□□□□ -0.65
CTNND1-237ENST00000534579 MYBBP1AQ9BQG0 1328 aaKnown RBP10.98□□□□□ -0.65
CTNND1-237ENST00000534579 NOL10Q9BSC4 688 aaKnown RBP10.97□□□□□ -0.65
CTNND1-237ENST00000534579 RRP7AQ9Y3A4 280 aaKnown RBP10.97□□□□□ -0.65
CTNND1-237ENST00000534579 PSME1Q06323 249 aa10.97□□□□□ -0.65
CTNND1-237ENST00000534579 TPM3P06753 285 aa10.96□□□□□ -0.65
CTNND1-237ENST00000534579 SLC4A10Q6U841 1118 aa10.96□□□□□ -0.65
CTNND1-237ENST00000534579 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.96□□□□□ -0.651e-6■■■■■ 38.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms