RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	MSH5	O43196	834 aa		19.81	■□□□□ 0.76
NCAPD3-213	ENST00000534532	MINK1	Q8N4C8	1332 aa	Predicted RBP	19.81	■□□□□ 0.76
NCAPD3-213	ENST00000534532	ATF3	P18847	181 aa		19.8	■□□□□ 0.76
NCAPD3-213	ENST00000534532	B4GALNT3	Q6L9W6	998 aa		19.8	■□□□□ 0.76
NCAPD3-213	ENST00000534532	RCAN3	Q9UKA8	241 aa		19.8	■□□□□ 0.76
NCAPD3-213	ENST00000534532	CGNL1	Q0VF96	1302 aa		19.8	■□□□□ 0.76
NCAPD3-213	ENST00000534532	TEF	Q10587	303 aa		19.79	■□□□□ 0.76
NCAPD3-213	ENST00000534532	DNTTIP2	Q5QJE6	756 aa	Known RBP	19.78	■□□□□ 0.76
NCAPD3-213	ENST00000534532	TTC5	Q8N0Z6	440 aa		19.76	■□□□□ 0.75
NCAPD3-213	ENST00000534532	PHLDB1	Q86UU1	1377 aa		19.76	■□□□□ 0.75
NCAPD3-213	ENST00000534532	RAD54L2	Q9Y4B4	1467 aa		19.76	■□□□□ 0.75
NCAPD3-213	ENST00000534532	ST20-MTHFS	A0A0A6YYL1	179 aa		19.76	■□□□□ 0.75
NCAPD3-213	ENST00000534532	CCDC146	Q8IYE0	955 aa		19.75	■□□□□ 0.75
NCAPD3-213	ENST00000534532	IGF1R	P08069	1367 aa		19.75	■□□□□ 0.75
NCAPD3-213	ENST00000534532	PMFBP1	Q8TBY8	1022 aa		19.74	■□□□□ 0.75
NCAPD3-213	ENST00000534532	NCAPD3	P42695	1498 aa		19.74	■□□□□ 0.75
NCAPD3-213	ENST00000534532	AQR	O60306	1485 aa	Known RBP eCLIP	19.74	■□□□□ 0.75	7e-7	■■■■□ 22
NCAPD3-213	ENST00000534532	MYOM3	Q5VTT5	1437 aa		19.73	■□□□□ 0.75
NCAPD3-213	ENST00000534532	PANK3	Q9H999	370 aa		19.72	■□□□□ 0.75
NCAPD3-213	ENST00000534532	GLIPR1L2	Q4G1C9	344 aa		19.72	■□□□□ 0.75
NCAPD3-213	ENST00000534532	CENPJ	Q9HC77	1338 aa	Predicted RBP	19.71	■□□□□ 0.75
NCAPD3-213	ENST00000534532	TRIM6-TRIM34	B2RNG4	842 aa		19.71	■□□□□ 0.75
NCAPD3-213	ENST00000534532	STAC3	Q96MF2	364 aa		19.71	■□□□□ 0.75
NCAPD3-213	ENST00000534532	KIF15	Q9NS87	1388 aa		19.7	■□□□□ 0.74
NCAPD3-213	ENST00000534532	HTATSF1	O43719	755 aa	Known RBP	19.69	■□□□□ 0.74
NCAPD3-213	ENST00000534532	PDE3B	Q13370	1112 aa		19.69	■□□□□ 0.74
NCAPD3-213	ENST00000534532	SYTL4	Q96C24	671 aa	Predicted RBP	19.68	■□□□□ 0.74
NCAPD3-213	ENST00000534532	NEXN	Q0ZGT2	675 aa		19.68	■□□□□ 0.74
NCAPD3-213	ENST00000534532	GRIN2B	Q13224	1484 aa		19.68	■□□□□ 0.74
NCAPD3-213	ENST00000534532	DHX57	Q6P158	1386 aa	Known RBP	19.67	■□□□□ 0.74
NCAPD3-213	ENST00000534532	CLUAP1	Q96AJ1	413 aa		19.67	■□□□□ 0.74
NCAPD3-213	ENST00000534532	TOMM22	Q9NS69	142 aa		19.66	■□□□□ 0.74
NCAPD3-213	ENST00000534532	CCDC34	Q96HJ3	373 aa		19.65	■□□□□ 0.74
NCAPD3-213	ENST00000534532	MYBBP1A	Q9BQG0	1328 aa	Known RBP	19.64	■□□□□ 0.73
NCAPD3-213	ENST00000534532	RAPGEF4	Q8WZA2	1011 aa		19.63	■□□□□ 0.73
NCAPD3-213	ENST00000534532	HSP90B1	P14625	803 aa	Known RBP	19.63	■□□□□ 0.73
NCAPD3-213	ENST00000534532	PHF23	Q9BUL5	403 aa	Predicted RBP	19.63	■□□□□ 0.73
NCAPD3-213	ENST00000534532	RRP7A	Q9Y3A4	280 aa	Known RBP	19.63	■□□□□ 0.73
NCAPD3-213	ENST00000534532	ERICH6B	Q5W0A0	696 aa		19.62	■□□□□ 0.73
NCAPD3-213	ENST00000534532	DIAPH1	O60610	1272 aa	Known RBP	19.62	■□□□□ 0.73
NCAPD3-213	ENST00000534532	NCBP3	Q53F19	620 aa	Known RBP	19.62	■□□□□ 0.73
NCAPD3-213	ENST00000534532	RUSC2	Q8N2Y8	1516 aa		19.61	■□□□□ 0.73
NCAPD3-213	ENST00000534532	ELL2	O00472	640 aa	Predicted RBP	19.6	■□□□□ 0.73
NCAPD3-213	ENST00000534532	PRG4	Q92954	1404 aa	Predicted RBP	19.59	■□□□□ 0.73
NCAPD3-213	ENST00000534532	L1TD1	Q5T7N2	865 aa	Known RBP	19.59	■□□□□ 0.73
NCAPD3-213	ENST00000534532	NGEF	Q8N5V2	710 aa		19.59	■□□□□ 0.73
NCAPD3-213	ENST00000534532	SPRYD3	Q8NCJ5	442 aa		19.59	■□□□□ 0.73
NCAPD3-213	ENST00000534532	NOL10	Q9BSC4	688 aa	Known RBP	19.59	■□□□□ 0.73
NCAPD3-213	ENST00000534532	NOP58	Q9Y2X3	529 aa	Known RBP	19.59	■□□□□ 0.73
NCAPD3-213	ENST00000534532	CHAF1A	Q13111	956 aa	Predicted RBP	19.59	■□□□□ 0.73
NCAPD3-213	ENST00000534532	TXNDC2	Q86VQ3	553 aa		19.58	■□□□□ 0.73
NCAPD3-213	ENST00000534532	DDX58	O95786	925 aa	Known RBP	19.58	■□□□□ 0.73
NCAPD3-213	ENST00000534532	EIF2S2	P20042	333 aa	Known RBP	19.58	■□□□□ 0.73
NCAPD3-213	ENST00000534532	PROSER2	Q86WR7	435 aa	Predicted RBP	19.58	■□□□□ 0.73
NCAPD3-213	ENST00000534532	LRRFIP1	Q32MZ4	808 aa	Known RBP	19.57	■□□□□ 0.72
NCAPD3-213	ENST00000534532	SYNJ2	O15056	1496 aa		19.57	■□□□□ 0.72
NCAPD3-213	ENST00000534532	MRC2	Q9UBG0	1479 aa		19.57	■□□□□ 0.72
NCAPD3-213	ENST00000534532	AFAP1	Q8N556	730 aa		19.57	■□□□□ 0.72
NCAPD3-213	ENST00000534532	USP47	Q96K76	1375 aa		19.57	■□□□□ 0.72
NCAPD3-213	ENST00000534532	NLRP2	Q9NX02	1062 aa		19.57	■□□□□ 0.72
NCAPD3-213	ENST00000534532	DRC7	Q8IY82	874 aa		19.56	■□□□□ 0.72
NCAPD3-213	ENST00000534532	THEMIS	Q8N1K5	641 aa	Predicted RBP	19.56	■□□□□ 0.72
NCAPD3-213	ENST00000534532	RASSF8	Q8NHQ8	419 aa		19.56	■□□□□ 0.72
NCAPD3-213	ENST00000534532	C9orf78	Q9NZ63	289 aa	Predicted RBP	19.56	■□□□□ 0.72
NCAPD3-213	ENST00000534532	DCAF8L1	A6NGE4	600 aa		19.56	■□□□□ 0.72
NCAPD3-213	ENST00000534532	ZNF644	Q9H582	1327 aa	Predicted RBP	19.55	■□□□□ 0.72
NCAPD3-213	ENST00000534532	GPRASP1	Q5JY77	1395 aa		19.55	■□□□□ 0.72
NCAPD3-213	ENST00000534532	KIF3A	Q9Y496	699 aa		19.55	■□□□□ 0.72
NCAPD3-213	ENST00000534532	AMOTL1	Q8IY63	956 aa		19.55	■□□□□ 0.72
NCAPD3-213	ENST00000534532	KIAA2012	Q0VF49	1180 aa		19.55	■□□□□ 0.72
NCAPD3-213	ENST00000534532	MARCH6	O60337	910 aa		19.54	■□□□□ 0.72
NCAPD3-213	ENST00000534532	GBP4	Q96PP9	640 aa		19.54	■□□□□ 0.72
NCAPD3-213	ENST00000534532	TRIM34	Q9BYJ4	488 aa		19.54	■□□□□ 0.72
NCAPD3-213	ENST00000534532	MIA2	Q96PC5	1412 aa		19.54	■□□□□ 0.72
NCAPD3-213	ENST00000534532	IFT140	Q96RY7	1462 aa		19.54	■□□□□ 0.72
NCAPD3-213	ENST00000534532	ARHGAP5	Q13017	1502 aa		19.54	■□□□□ 0.72
NCAPD3-213	ENST00000534532	PTMS	P20962	102 aa		19.53	■□□□□ 0.72
NCAPD3-213	ENST00000534532		E9PSI1	815 aa		19.53	■□□□□ 0.72
NCAPD3-213	ENST00000534532	CUX1	P39880	1505 aa		19.52	■□□□□ 0.72
NCAPD3-213	ENST00000534532	TCERG1	O14776	1098 aa	Known RBP	19.52	■□□□□ 0.72
NCAPD3-213	ENST00000534532	NLRP6	P59044	892 aa		19.52	■□□□□ 0.72
NCAPD3-213	ENST00000534532	KLHL34	Q8N239	644 aa		19.52	■□□□□ 0.72
NCAPD3-213	ENST00000534532	VPS53	Q5VIR6	699 aa		19.52	■□□□□ 0.72
NCAPD3-213	ENST00000534532	PRDM2	Q13029	1718 aa		19.52	■□□□□ 0.71
NCAPD3-213	ENST00000534532	MFAP1	P55081	439 aa	Known RBP	19.52	■□□□□ 0.71
NCAPD3-213	ENST00000534532	ANKRD50	Q9ULJ7	1429 aa		19.51	■□□□□ 0.71
NCAPD3-213	ENST00000534532	CHMP4C	Q96CF2	233 aa		19.51	■□□□□ 0.71
NCAPD3-213	ENST00000534532	ZKSCAN2	Q63HK3	967 aa		19.51	■□□□□ 0.71
NCAPD3-213	ENST00000534532	VPS37D	Q86XT2	251 aa		19.5	■□□□□ 0.71
NCAPD3-213	ENST00000534532	FGD6	Q6ZV73	1430 aa		19.49	■□□□□ 0.71
NCAPD3-213	ENST00000534532	CTDP1	Q9Y5B0	961 aa	Predicted RBP	19.49	■□□□□ 0.71
NCAPD3-213	ENST00000534532	ESCO1	Q5FWF5	840 aa		19.48	■□□□□ 0.71
NCAPD3-213	ENST00000534532	WASHC2A	Q641Q2	1341 aa		19.48	■□□□□ 0.71
NCAPD3-213	ENST00000534532	RIPK4	P57078	832 aa		19.48	■□□□□ 0.71
NCAPD3-213	ENST00000534532	SYAP1	Q96A49	352 aa	Predicted RBP	19.47	■□□□□ 0.71
NCAPD3-213	ENST00000534532	TPM4	P67936	248 aa		19.47	■□□□□ 0.71
NCAPD3-213	ENST00000534532	KIF16B	Q96L93	1317 aa		19.47	■□□□□ 0.71
NCAPD3-213	ENST00000534532	CSPP1	Q1MSJ5	1256 aa		19.47	■□□□□ 0.71
NCAPD3-213	ENST00000534532	POGZ	Q7Z3K3	1410 aa		19.46	■□□□□ 0.71
NCAPD3-213	ENST00000534532	NUTM2G	Q5VZR2	741 aa		19.46	■□□□□ 0.71

Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms