RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 SHROOM2Q13796 1616 aa12.57□□□□□ -0.4
CASP4-212ENST00000533730 JPH4Q96JJ6 628 aa12.55□□□□□ -0.4
CASP4-212ENST00000533730 G3V3G9 751 aa12.54□□□□□ -0.4
CASP4-212ENST00000533730 IQGAP2Q13576 1575 aa12.53□□□□□ -0.4
CASP4-212ENST00000533730 TMEM92Q6UXU6 159 aa12.52□□□□□ -0.41
CASP4-212ENST00000533730 PRG4Q92954 1404 aaPredicted RBP12.52□□□□□ -0.41
CASP4-212ENST00000533730 ARAP1Q96P48 1450 aa12.52□□□□□ -0.41
CASP4-212ENST00000533730 P3H3Q8IVL6 736 aa12.51□□□□□ -0.41
CASP4-212ENST00000533730 FAM9AQ8IZU1 332 aaPredicted RBP12.51□□□□□ -0.41
CASP4-212ENST00000533730 CRISPLD2Q9H0B8 497 aa12.51□□□□□ -0.41
CASP4-212ENST00000533730 NCKAP5LQ9HCH0 1330 aa12.51□□□□□ -0.41
CASP4-212ENST00000533730 LHX8Q68G74 356 aa12.5□□□□□ -0.41
CASP4-212ENST00000533730 C14orf37Q86TY3 774 aa12.5□□□□□ -0.41
CASP4-212ENST00000533730 KIF21BO75037 1637 aa12.5□□□□□ -0.41
CASP4-212ENST00000533730 CTTNBP2Q8WZ74 1663 aa12.49□□□□□ -0.41
CASP4-212ENST00000533730 KIF3CO14782 793 aa12.49□□□□□ -0.41
CASP4-212ENST00000533730 CARMIL2Q6F5E8 1435 aa12.48□□□□□ -0.41
CASP4-212ENST00000533730 CYB5RLQ6IPT4 315 aa12.48□□□□□ -0.41
CASP4-212ENST00000533730 C3orf67Q6ZVT6 689 aa12.48□□□□□ -0.41
CASP4-212ENST00000533730 DAXXQ9UER7 740 aaPredicted RBP12.48□□□□□ -0.41
CASP4-212ENST00000533730 ERCC6L2Q5T890 1561 aa12.47□□□□□ -0.41
CASP4-212ENST00000533730 UGGT2Q9NYU1 1516 aa12.47□□□□□ -0.41
CASP4-212ENST00000533730 GPHNQ9NQX3 736 aaPredicted RBP12.46□□□□□ -0.41
CASP4-212ENST00000533730 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.46□□□□□ -0.41
CASP4-212ENST00000533730 PDE4AP27815 886 aa12.45□□□□□ -0.42
CASP4-212ENST00000533730 LMOD2Q6P5Q4 547 aa12.45□□□□□ -0.42
CASP4-212ENST00000533730 MAMSTRQ6ZN01 415 aa12.45□□□□□ -0.42
CASP4-212ENST00000533730 OTUD5Q96G74 571 aa12.45□□□□□ -0.42
CASP4-212ENST00000533730 C2orf72A6NCS6 295 aa12.44□□□□□ -0.42
CASP4-212ENST00000533730 KCNV2Q8TDN2 545 aa12.44□□□□□ -0.42
CASP4-212ENST00000533730 GOLGA3Q08378 1498 aa12.44□□□□□ -0.42
CASP4-212ENST00000533730 MFSD10Q14728 455 aa12.43□□□□□ -0.42
CASP4-212ENST00000533730 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.43□□□□□ -0.42
CASP4-212ENST00000533730 SCUBE2Q9NQ36 999 aa12.43□□□□□ -0.42
CASP4-212ENST00000533730 TNIKQ9UKE5 1360 aa12.42□□□□□ -0.42
CASP4-212ENST00000533730 DISP1Q96F81 1524 aa12.41□□□□□ -0.42
CASP4-212ENST00000533730 TMC2Q8TDI7 906 aa12.4□□□□□ -0.42
CASP4-212ENST00000533730 LARP6Q9BRS8 491 aaKnown RBP12.4□□□□□ -0.42
CASP4-212ENST00000533730 KIAA0556O60303 1618 aa12.4□□□□□ -0.42
CASP4-212ENST00000533730 PTPRGP23470 1445 aa12.39□□□□□ -0.43
CASP4-212ENST00000533730 FOXK1P85037 733 aa12.39□□□□□ -0.43
CASP4-212ENST00000533730 UBTFP17480 764 aaKnown RBP12.38□□□□□ -0.43
CASP4-212ENST00000533730 HOMEZQ8IX15 550 aa12.38□□□□□ -0.43
CASP4-212ENST00000533730 WDR70Q9NW82 654 aa12.38□□□□□ -0.43
CASP4-212ENST00000533730 DSG2Q14126 1118 aa12.37□□□□□ -0.43
CASP4-212ENST00000533730 SLAIN1Q8ND83 568 aa12.36□□□□□ -0.43
CASP4-212ENST00000533730 BRPF1P55201 1214 aaPredicted RBP12.35□□□□□ -0.43
CASP4-212ENST00000533730 DDX27Q96GQ7 796 aaKnown RBP12.35□□□□□ -0.43
CASP4-212ENST00000533730 SAMD9Q5K651 1589 aa12.34□□□□□ -0.43
CASP4-212ENST00000533730 EFCAB5A4FU69 1503 aa12.33□□□□□ -0.44
CASP4-212ENST00000533730 PPP1R15BQ5SWA1 713 aa12.33□□□□□ -0.44
CASP4-212ENST00000533730 UACAQ9BZF9 1416 aa12.31□□□□□ -0.44
CASP4-212ENST00000533730 PLPP6Q8IY26 295 aa12.31□□□□□ -0.44
CASP4-212ENST00000533730 UHRF1BP1LA0JNW5 1464 aa12.31□□□□□ -0.44
CASP4-212ENST00000533730 CAMK2BQ13554 666 aa12.3□□□□□ -0.44
CASP4-212ENST00000533730 TTBK1Q5TCY1 1321 aaPredicted RBP12.3□□□□□ -0.44
CASP4-212ENST00000533730 ADCY10Q96PN6 1610 aa12.29□□□□□ -0.44
CASP4-212ENST00000533730 ABCC2Q92887 1545 aa12.29□□□□□ -0.44
CASP4-212ENST00000533730 RANGAP1P46060 587 aaPredicted RBP12.27□□□□□ -0.45
CASP4-212ENST00000533730 ABCA8O94911 1581 aa12.26□□□□□ -0.45
CASP4-212ENST00000533730 E2F4Q16254 413 aa12.25□□□□□ -0.45
CASP4-212ENST00000533730 FHOD3Q2V2M9 1422 aa12.25□□□□□ -0.45
CASP4-212ENST00000533730 PLB1Q6P1J6 1458 aa12.25□□□□□ -0.45
CASP4-212ENST00000533730 MAPKBP1O60336 1514 aa12.25□□□□□ -0.45
CASP4-212ENST00000533730 HOXB3P14651 431 aaPredicted RBP12.24□□□□□ -0.45
CASP4-212ENST00000533730 ZC3H15Q8WU90 426 aaKnown RBP12.24□□□□□ -0.45
CASP4-212ENST00000533730 KDM5BQ9UGL1 1544 aa12.24□□□□□ -0.45
CASP4-212ENST00000533730 ARHGAP35Q9NRY4 1499 aa12.23□□□□□ -0.45
CASP4-212ENST00000533730 SLC34A2O95436 690 aa12.23□□□□□ -0.45
CASP4-212ENST00000533730 FMN1Q68DA7 1419 aa12.22□□□□□ -0.45
CASP4-212ENST00000533730 NEUROD2Q15784 382 aa12.22□□□□□ -0.45
CASP4-212ENST00000533730 EMILIN3Q9NT22 766 aa12.22□□□□□ -0.45
CASP4-212ENST00000533730 RAPGEF6Q8TEU7 1601 aa12.21□□□□□ -0.46
CASP4-212ENST00000533730 CLIP1P30622 1438 aa12.2□□□□□ -0.46
CASP4-212ENST00000533730 ARIH1Q9Y4X5 557 aaPredicted RBP12.2□□□□□ -0.46
CASP4-212ENST00000533730 ZCCHC11Q5TAX3 1644 aaKnown RBP12.19□□□□□ -0.46
CASP4-212ENST00000533730 OXER1Q8TDS5 423 aa12.18□□□□□ -0.46
CASP4-212ENST00000533730 PTCD2Q8WV60 388 aaKnown RBP12.18□□□□□ -0.46
CASP4-212ENST00000533730 ARHGEF1Q92888 912 aaKnown RBP12.18□□□□□ -0.46
CASP4-212ENST00000533730 SLC24A3Q9HC58 644 aa12.18□□□□□ -0.46
CASP4-212ENST00000533730 ABCC10Q5T3U5 1492 aa12.18□□□□□ -0.46
CASP4-212ENST00000533730 ASXL2Q76L83 1435 aa12.18□□□□□ -0.46
CASP4-212ENST00000533730 CEP162Q5TB80 1403 aa12.16□□□□□ -0.46
CASP4-212ENST00000533730 NUP153P49790 1475 aaKnown RBP12.15□□□□□ -0.46
CASP4-212ENST00000533730 SNPHO15079 494 aa12.15□□□□□ -0.46
CASP4-212ENST00000533730 DOK7Q18PE1 504 aa12.15□□□□□ -0.46
CASP4-212ENST00000533730 ATP10BO94823 1461 aa12.14□□□□□ -0.47
CASP4-212ENST00000533730 WDR7Q9Y4E6 1490 aa12.14□□□□□ -0.47
CASP4-212ENST00000533730 DIP2BQ9P265 1576 aa12.14□□□□□ -0.47
CASP4-212ENST00000533730 LOC105371045A0A1W2PR82 267 aa12.14□□□□□ -0.47
CASP4-212ENST00000533730 SEMA3EO15041 775 aa12.14□□□□□ -0.47
CASP4-212ENST00000533730 HECW1Q76N89 1606 aa12.14□□□□□ -0.47
CASP4-212ENST00000533730 FAM69CQ0P6D2 419 aa12.13□□□□□ -0.47
CASP4-212ENST00000533730 TESPA1A2RU30 521 aaPredicted RBP12.12□□□□□ -0.47
CASP4-212ENST00000533730 UPF1Q92900 1129 aaKnown RBP eCLIP12.12□□□□□ -0.47
CASP4-212ENST00000533730 GLI2P10070 1586 aa12.12□□□□□ -0.47
CASP4-212ENST00000533730 KIF13AQ9H1H9 1805 aa12.11□□□□□ -0.47
CASP4-212ENST00000533730 GPR153Q6NV75 609 aa12.11□□□□□ -0.47
CASP4-212ENST00000533730 ZSWIM6Q9HCJ5 1215 aa12.11□□□□□ -0.47
CASP4-212ENST00000533730 PCDHGA4Q9Y5G9 962 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms