RNA–Protein interactions for RNA: ENST00000533299.2

LMO7-223, Transcript of LIM domain 7, humanhuman

TSL 3

Gene LMO7, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-223ENST00000533299 DSG2Q14126 1118 aa8.53□□□□□ -1.04
LMO7-223ENST00000533299 ZFRQ96KR1 1074 aaKnown RBP8.52□□□□□ -1.05
LMO7-223ENST00000533299 ADAM33Q9BZ11 813 aa8.51□□□□□ -1.05
LMO7-223ENST00000533299 ANO8Q9HCE9 1232 aaPredicted RBP8.51□□□□□ -1.05
LMO7-223ENST00000533299 TSR3Q9UJK0 312 aaKnown RBP8.51□□□□□ -1.05
LMO7-223ENST00000533299 ONECUT3O60422 494 aaPredicted RBP8.5□□□□□ -1.05
LMO7-223ENST00000533299 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.5□□□□□ -1.05
LMO7-223ENST00000533299 STK25O00506 426 aa8.47□□□□□ -1.05
LMO7-223ENST00000533299 PPP1R37O75864 691 aa8.47□□□□□ -1.05
LMO7-223ENST00000533299 CHGAP10645 457 aaKnown RBP8.47□□□□□ -1.05
LMO7-223ENST00000533299 BBXQ8WY36 941 aaPredicted RBP8.47□□□□□ -1.05
LMO7-223ENST00000533299 SLC24A1O60721 1099 aa8.45□□□□□ -1.06
LMO7-223ENST00000533299 DGAT1O75907 488 aa8.45□□□□□ -1.06
LMO7-223ENST00000533299 PPP1R18Q6NYC8 613 aa8.45□□□□□ -1.06
LMO7-223ENST00000533299 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.45□□□□□ -1.06
LMO7-223ENST00000533299 PROX2Q3B8N5 592 aa8.45□□□□□ -1.06
LMO7-223ENST00000533299 HPS5Q9UPZ3 1129 aa8.45□□□□□ -1.06
LMO7-223ENST00000533299 TJAP1Q5JTD0 557 aa8.44□□□□□ -1.06
LMO7-223ENST00000533299 UPF1Q92900 1129 aaKnown RBP eCLIP8.44□□□□□ -1.06
LMO7-223ENST00000533299 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.44□□□□□ -1.06
LMO7-223ENST00000533299 MYT1Q01538 1121 aa8.43□□□□□ -1.06
LMO7-223ENST00000533299 HS6ST3Q8IZP7 471 aa8.43□□□□□ -1.06
LMO7-223ENST00000533299 LRCH3Q96II8 777 aa8.42□□□□□ -1.06
LMO7-223ENST00000533299 POTECB2RU33 542 aa8.41□□□□□ -1.06
LMO7-223ENST00000533299 PLCB2Q00722 1185 aa8.41□□□□□ -1.06
LMO7-223ENST00000533299 INSM1Q01101 510 aaPredicted RBP8.41□□□□□ -1.06
LMO7-223ENST00000533299 KIAA1468Q9P260 1216 aa8.41□□□□□ -1.06
LMO7-223ENST00000533299 PKDCCQ504Y2 493 aa8.4□□□□□ -1.06
LMO7-223ENST00000533299 IL21Q9HBE4 155 aa8.4□□□□□ -1.06
LMO7-223ENST00000533299 FAM98CQ17RN3 349 aaKnown RBP8.4□□□□□ -1.07
LMO7-223ENST00000533299 WIPF1O43516 503 aa8.38□□□□□ -1.07
LMO7-223ENST00000533299 COL9A1P20849 921 aa8.38□□□□□ -1.07
LMO7-223ENST00000533299 EVI5O60447 810 aa8.37□□□□□ -1.07
LMO7-223ENST00000533299 DNAJC5Q9H3Z4 198 aa8.36□□□□□ -1.07
LMO7-223ENST00000533299 WFS1O76024 890 aa8.36□□□□□ -1.07
LMO7-223ENST00000533299 SPRYD3Q8NCJ5 442 aa8.36□□□□□ -1.07
LMO7-223ENST00000533299 GGCXP38435 758 aa8.35□□□□□ -1.07
LMO7-223ENST00000533299 PPP4CP60510 307 aa8.35□□□□□ -1.07
LMO7-223ENST00000533299 PAXIP1Q6ZW49 1069 aaPredicted RBP8.35□□□□□ -1.07
LMO7-223ENST00000533299 RYDENQ9NUL5 291 aaKnown RBP8.35□□□□□ -1.07
LMO7-223ENST00000533299 CFAP44Q96MT7 982 aa8.34□□□□□ -1.07
LMO7-223ENST00000533299 FBXW7Q969H0 707 aa8.33□□□□□ -1.08
LMO7-223ENST00000533299 MTRQ99707 1265 aa8.33□□□□□ -1.08
LMO7-223ENST00000533299 SEPT9Q9UHD8 586 aaPredicted RBP8.33□□□□□ -1.08
LMO7-223ENST00000533299 TRIM67Q6ZTA4 783 aa8.33□□□□□ -1.08
LMO7-223ENST00000533299 PRR20EP86478 221 aa8.32□□□□□ -1.08
LMO7-223ENST00000533299 PRR20CP86479 221 aa8.32□□□□□ -1.08
LMO7-223ENST00000533299 PRR20DP86480 221 aa8.32□□□□□ -1.08
LMO7-223ENST00000533299 PRR20BP86481 221 aa8.32□□□□□ -1.08
LMO7-223ENST00000533299 PRR20AP86496 221 aa8.32□□□□□ -1.08
LMO7-223ENST00000533299 TMUB1Q9BVT8 246 aa8.32□□□□□ -1.08
LMO7-223ENST00000533299 HAP1P54257 671 aaPredicted RBP8.31□□□□□ -1.08
LMO7-223ENST00000533299 PCDHGA10Q9Y5H3 936 aa8.3□□□□□ -1.08
LMO7-223ENST00000533299 TRIM6-TRIM34B2RNG4 842 aa8.29□□□□□ -1.08
LMO7-223ENST00000533299 TYW1BQ6NUM6 668 aa8.29□□□□□ -1.08
LMO7-223ENST00000533299 PPP1R15BQ5SWA1 713 aa8.29□□□□□ -1.08
LMO7-223ENST00000533299 CRISPLD2Q9H0B8 497 aa8.26□□□□□ -1.09
LMO7-223ENST00000533299 PHF14O94880 888 aa8.25□□□□□ -1.09
LMO7-223ENST00000533299 SUZ12Q15022 739 aaKnown RBP8.24□□□□□ -1.09
LMO7-223ENST00000533299 ZNF516Q92618 1163 aa8.24□□□□□ -1.09
LMO7-223ENST00000533299 NFX1Q12986 1120 aaKnown RBP8.24□□□□□ -1.09
LMO7-223ENST00000533299 NKX1-1Q15270 411 aaPredicted RBP8.24□□□□□ -1.09
LMO7-223ENST00000533299 FAM181BA6NEQ2 426 aa8.23□□□□□ -1.09
LMO7-223ENST00000533299 SLC19A1P41440 591 aa8.23□□□□□ -1.09
LMO7-223ENST00000533299 AAASQ9NRG9 546 aa8.23□□□□□ -1.09
LMO7-223ENST00000533299 FAM187AA6NFU0 413 aa8.22□□□□□ -1.09
LMO7-223ENST00000533299 ZNF598Q86UK7 904 aaKnown RBP8.22□□□□□ -1.09
LMO7-223ENST00000533299 GTPBP6O43824 516 aaPredicted RBP8.22□□□□□ -1.09
LMO7-223ENST00000533299 MAP3K9P80192 1104 aa8.21□□□□□ -1.1
LMO7-223ENST00000533299 C6orf132Q5T0Z8 1188 aa8.2□□□□□ -1.1
LMO7-223ENST00000533299 VSIG10Q8N0Z9 540 aa8.2□□□□□ -1.1
LMO7-223ENST00000533299 SPRYD7Q5W111 196 aa8.19□□□□□ -1.1
LMO7-223ENST00000533299 PACS2Q86VP3 889 aa8.19□□□□□ -1.1
LMO7-223ENST00000533299 NKX2-3Q8TAU0 364 aa8.19□□□□□ -1.1
LMO7-223ENST00000533299 EPAS1Q99814 870 aa8.18□□□□□ -1.1
LMO7-223ENST00000533299 CRIPAKQ8N1N5 446 aa8.17□□□□□ -1.1
LMO7-223ENST00000533299 ST8SIA5O15466 376 aa8.17□□□□□ -1.1
LMO7-223ENST00000533299 PDE4AP27815 886 aa8.15□□□□□ -1.1
LMO7-223ENST00000533299 SAMD7Q7Z3H4 446 aa8.15□□□□□ -1.1
LMO7-223ENST00000533299 GDF9O60383 454 aa8.15□□□□□ -1.11
LMO7-223ENST00000533299 EMID1Q96A84 441 aaPredicted RBP8.14□□□□□ -1.11
LMO7-223ENST00000533299 TSHZ2Q9NRE2 1034 aa8.14□□□□□ -1.11
LMO7-223ENST00000533299 NECTIN2Q92692 538 aa8.13□□□□□ -1.11
LMO7-223ENST00000533299 C11orf95C9JLR9 678 aaPredicted RBP8.12□□□□□ -1.11
LMO7-223ENST00000533299 ZNF697Q5TEC3 545 aa8.11□□□□□ -1.11
LMO7-223ENST00000533299 APLP1P51693 650 aa8.1□□□□□ -1.11
LMO7-223ENST00000533299 RNF223E7ERA6 249 aa8.1□□□□□ -1.11
LMO7-223ENST00000533299 LMOD2Q6P5Q4 547 aa8.09□□□□□ -1.11
LMO7-223ENST00000533299 GMPR2Q9P2T1 348 aaKnown RBP8.09□□□□□ -1.11
LMO7-223ENST00000533299 TSKSQ9UJT2 592 aa8.09□□□□□ -1.11
LMO7-223ENST00000533299 ANKLE1Q8NAG6 615 aa8.08□□□□□ -1.12
LMO7-223ENST00000533299 ZPR1O75312 459 aa8.08□□□□□ -1.12
LMO7-223ENST00000533299 AVPP01185 164 aa8.08□□□□□ -1.12
LMO7-223ENST00000533299 TERTO14746 1132 aaKnown RBP8.07□□□□□ -1.12
LMO7-223ENST00000533299 NCKAP5LQ9HCH0 1330 aa8.07□□□□□ -1.12
LMO7-223ENST00000533299 TNFRSF10AO00220 468 aa8.06□□□□□ -1.12
LMO7-223ENST00000533299 LCE2CQ5TA81 110 aa8.06□□□□□ -1.12
LMO7-223ENST00000533299 CTC1Q2NKJ3 1217 aa8.06□□□□□ -1.12
LMO7-223ENST00000533299 HDGFP51858 240 aaKnown RBP8.05□□□□□ -1.12
LMO7-223ENST00000533299 DACH1Q9UI36 760 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms