RNA–Protein interactions for RNA: ENST00000532145.1

LRRK1-209, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 2

Gene LRRK1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-209ENST00000532145 CCDC141Q6ZP82 1450 aa19.1■□□□□ 0.65
LRRK1-209ENST00000532145 RALBP1Q15311 655 aa19.09■□□□□ 0.65
LRRK1-209ENST00000532145 FAM135AQ9P2D6 1515 aa19.09■□□□□ 0.65
LRRK1-209ENST00000532145 RSPH4AQ5TD94 716 aa19.09■□□□□ 0.65
LRRK1-209ENST00000532145 KDM2AQ9Y2K7 1162 aa19.09■□□□□ 0.65
LRRK1-209ENST00000532145 E9PCH4 1651 aa19.09■□□□□ 0.65
LRRK1-209ENST00000532145 MYBBP1AQ9BQG0 1328 aaKnown RBP19.08■□□□□ 0.65
LRRK1-209ENST00000532145 SAMD9LQ8IVG5 1584 aa19.07■□□□□ 0.64
LRRK1-209ENST00000532145 PREX2Q70Z35 1606 aa19.06■□□□□ 0.64
LRRK1-209ENST00000532145 PRAG1Q86YV5 1406 aa19.05■□□□□ 0.64
LRRK1-209ENST00000532145 ERICH6Q7L0X2 663 aa19.04■□□□□ 0.64
LRRK1-209ENST00000532145 CDC42BPBQ9Y5S2 1711 aa19.04■□□□□ 0.64
LRRK1-209ENST00000532145 TRPM1Q7Z4N2 1603 aa19.03■□□□□ 0.64
LRRK1-209ENST00000532145 CCDC144AA2RUR9 1427 aa19.03■□□□□ 0.64
LRRK1-209ENST00000532145 CCDC136Q96JN2 1154 aa19.02■□□□□ 0.63
LRRK1-209ENST00000532145 GPRASP1Q5JY77 1395 aa19.01■□□□□ 0.63
LRRK1-209ENST00000532145 MAST1Q9Y2H9 1570 aa19.01■□□□□ 0.63
LRRK1-209ENST00000532145 PARD3Q8TEW0 1356 aa19■□□□□ 0.63
LRRK1-209ENST00000532145 UNC13BO14795 1591 aa19■□□□□ 0.63
LRRK1-209ENST00000532145 PLA2R1Q13018 1463 aa18.99■□□□□ 0.63
LRRK1-209ENST00000532145 NLRP13Q86W25 1043 aa18.98■□□□□ 0.63
LRRK1-209ENST00000532145 PER1O15534 1290 aaPredicted RBP18.97■□□□□ 0.63
LRRK1-209ENST00000532145 LAMC1P11047 1609 aa18.97■□□□□ 0.63
LRRK1-209ENST00000532145 SYCP2Q9BX26 1530 aa18.96■□□□□ 0.63
LRRK1-209ENST00000532145 A2MP01023 1474 aa18.96■□□□□ 0.63
LRRK1-209ENST00000532145 WASHC2CQ9Y4E1 1318 aa18.95■□□□□ 0.62
LRRK1-209ENST00000532145 SENP3-EIF4A1A0A087X0R7 540 aa18.94■□□□□ 0.62
LRRK1-209ENST00000532145 COL17A1Q9UMD9 1497 aaPredicted RBP18.94■□□□□ 0.62
LRRK1-209ENST00000532145 PRDM15P57071 1507 aaPredicted RBP18.94■□□□□ 0.62
LRRK1-209ENST00000532145 NBPF1Q3BBV0 1214 aa18.93■□□□□ 0.62
LRRK1-209ENST00000532145 PLXNC1O60486 1568 aa18.93■□□□□ 0.62
LRRK1-209ENST00000532145 IQGAP3Q86VI3 1631 aa18.93■□□□□ 0.62
LRRK1-209ENST00000532145 ATP10AO60312 1499 aa18.93■□□□□ 0.62
LRRK1-209ENST00000532145 PDE3BQ13370 1112 aa18.93■□□□□ 0.62
LRRK1-209ENST00000532145 TTC37Q6PGP7 1564 aa18.92■□□□□ 0.62
LRRK1-209ENST00000532145 ARHGAP5Q13017 1502 aa18.92■□□□□ 0.62
LRRK1-209ENST00000532145 RRP1P56182 461 aaKnown RBP18.92■□□□□ 0.62
LRRK1-209ENST00000532145 INSRP06213 1382 aa18.92■□□□□ 0.62
LRRK1-209ENST00000532145 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.92■□□□□ 0.62
LRRK1-209ENST00000532145 TESK2Q96S53 571 aa18.91■□□□□ 0.62
LRRK1-209ENST00000532145 RGL3Q3MIN7 710 aa18.91■□□□□ 0.62
LRRK1-209ENST00000532145 BCL11AQ9H165 835 aa18.91■□□□□ 0.62
LRRK1-209ENST00000532145 MYT1LQ9UL68 1186 aa18.91■□□□□ 0.62
LRRK1-209ENST00000532145 PLEKHH2Q8IVE3 1493 aa18.9■□□□□ 0.62
LRRK1-209ENST00000532145 ZMYM4Q5VZL5 1548 aa18.9■□□□□ 0.62
LRRK1-209ENST00000532145 EIF2AK4Q9P2K8 1649 aaKnown RBP18.89■□□□□ 0.62
LRRK1-209ENST00000532145 NOP58Q9Y2X3 529 aaKnown RBP18.89■□□□□ 0.62
LRRK1-209ENST00000532145 MAGI2Q86UL8 1455 aa18.89■□□□□ 0.61
LRRK1-209ENST00000532145 RCAN3Q9UKA8 241 aa18.89■□□□□ 0.61
LRRK1-209ENST00000532145 DISP3Q9P2K9 1392 aa18.88■□□□□ 0.61
LRRK1-209ENST00000532145 DUOX2Q9NRD8 1548 aa18.87■□□□□ 0.61
LRRK1-209ENST00000532145 SHROOM2Q13796 1616 aa18.86■□□□□ 0.61
LRRK1-209ENST00000532145 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.86■□□□□ 0.61
LRRK1-209ENST00000532145 ERBINQ96RT1 1412 aa18.86■□□□□ 0.61
LRRK1-209ENST00000532145 MYO5CQ9NQX4 1742 aa18.85■□□□□ 0.61
LRRK1-209ENST00000532145 BLMP54132 1417 aaPredicted RBP18.84■□□□□ 0.61
LRRK1-209ENST00000532145 ABCC2Q92887 1545 aa18.83■□□□□ 0.61
LRRK1-209ENST00000532145 ANP32AP39687 249 aaKnown RBP18.83■□□□□ 0.6
LRRK1-209ENST00000532145 EXOC6Q8TAG9 804 aa18.83■□□□□ 0.6
LRRK1-209ENST00000532145 TMF1P82094 1093 aa18.82■□□□□ 0.6
LRRK1-209ENST00000532145 IPO9Q96P70 1041 aaKnown RBP18.82■□□□□ 0.6
LRRK1-209ENST00000532145 PANK3Q9H999 370 aa18.82■□□□□ 0.6
LRRK1-209ENST00000532145 RNF17Q9BXT8 1623 aaKnown RBP18.81■□□□□ 0.6
LRRK1-209ENST00000532145 PAK3O75914 559 aaPredicted RBP18.81■□□□□ 0.6
LRRK1-209ENST00000532145 CC2D1BQ5T0F9 858 aaKnown RBP18.8■□□□□ 0.6
LRRK1-209ENST00000532145 SALL2Q9Y467 1007 aaPredicted RBP18.8■□□□□ 0.6
LRRK1-209ENST00000532145 CHD1O14646 1710 aa18.79■□□□□ 0.6
LRRK1-209ENST00000532145 PLCH2O75038 1416 aa18.79■□□□□ 0.6
LRRK1-209ENST00000532145 CDCA7LQ96GN5 454 aa18.78■□□□□ 0.6
LRRK1-209ENST00000532145 TCERG1O14776 1098 aaKnown RBP18.78■□□□□ 0.6
LRRK1-209ENST00000532145 WDR7Q9Y4E6 1490 aa18.74■□□□□ 0.59
LRRK1-209ENST00000532145 ERCC6L2Q5T890 1561 aa18.73■□□□□ 0.59
LRRK1-209ENST00000532145 ABCC1P33527 1531 aa18.73■□□□□ 0.59
LRRK1-209ENST00000532145 EFCAB2Q5VUJ9 269 aa18.73■□□□□ 0.59
LRRK1-209ENST00000532145 MS4A1P11836 297 aa18.72■□□□□ 0.59
LRRK1-209ENST00000532145 MADDQ8WXG6 1647 aa18.72■□□□□ 0.59
LRRK1-209ENST00000532145 ZBTB47Q9UFB7 747 aaPredicted RBP18.72■□□□□ 0.59
LRRK1-209ENST00000532145 STAC3Q96MF2 364 aa18.71■□□□□ 0.59
LRRK1-209ENST00000532145 IQGAP1P46940 1657 aa18.7■□□□□ 0.58
LRRK1-209ENST00000532145 TRAPPC8Q9Y2L5 1435 aa18.7■□□□□ 0.58
LRRK1-209ENST00000532145 TRPM2O94759 1503 aa18.7■□□□□ 0.58
LRRK1-209ENST00000532145 RTEL1-TNFRSF6BF6WH68 1400 aa18.68■□□□□ 0.58
LRRK1-209ENST00000532145 SCAPERQ9BY12 1400 aa18.68■□□□□ 0.58
LRRK1-209ENST00000532145 UHRF1BP1LA0JNW5 1464 aa18.68■□□□□ 0.58
LRRK1-209ENST00000532145 PDE4AP27815 886 aa18.68■□□□□ 0.58
LRRK1-209ENST00000532145 DEKP35659 375 aaKnown RBP18.68■□□□□ 0.58
LRRK1-209ENST00000532145 ADAMTS8Q9UP79 889 aa18.68■□□□□ 0.58
LRRK1-209ENST00000532145 PTPRTO14522 1441 aa18.68■□□□□ 0.58
LRRK1-209ENST00000532145 BACH2Q9BYV9 841 aa18.68■□□□□ 0.58
LRRK1-209ENST00000532145 ZCCHC11Q5TAX3 1644 aaKnown RBP18.67■□□□□ 0.58
LRRK1-209ENST00000532145 CDCA8Q53HL2 280 aa18.67■□□□□ 0.58
LRRK1-209ENST00000532145 AMER1Q5JTC6 1135 aaPredicted RBP18.67■□□□□ 0.58
LRRK1-209ENST00000532145 KNSTRNQ9Y448 316 aa18.67■□□□□ 0.58
LRRK1-209ENST00000532145 SCAF11Q99590 1463 aaKnown RBP18.67■□□□□ 0.58
LRRK1-209ENST00000532145 SYNMO15061 1565 aa18.66■□□□□ 0.58
LRRK1-209ENST00000532145 PLIN1O60240 522 aa18.66■□□□□ 0.58
LRRK1-209ENST00000532145 PPP2R1AP30153 589 aa18.66■□□□□ 0.58
LRRK1-209ENST00000532145 NBR1Q14596 966 aa18.66■□□□□ 0.58
LRRK1-209ENST00000532145 SPHKAPQ2M3C7 1700 aa18.66■□□□□ 0.58
LRRK1-209ENST00000532145 ARAP3Q8WWN8 1544 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms