RNA–Protein interactions for RNA: ENST00000532032.5

ATXN3-215, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,191 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-215ENST00000532032 EPAS1Q99814 870 aa12.29□□□□□ -0.44
ATXN3-215ENST00000532032 COL9A1P20849 921 aa12.28□□□□□ -0.44
ATXN3-215ENST00000532032 PTPN5P54829 565 aa12.28□□□□□ -0.44
ATXN3-215ENST00000532032 THSD4Q6ZMP0 1018 aa12.28□□□□□ -0.44
ATXN3-215ENST00000532032 WNT2BQ93097 391 aa12.27□□□□□ -0.45
ATXN3-215ENST00000532032 PROX2Q3B8N5 592 aa12.26□□□□□ -0.45
ATXN3-215ENST00000532032 RABGEF1Q9UJ41 708 aa12.26□□□□□ -0.45
ATXN3-215ENST00000532032 C6orf132Q5T0Z8 1188 aa12.23□□□□□ -0.45
ATXN3-215ENST00000532032 DDX12PQ92771 950 aa12.22□□□□□ -0.45
ATXN3-215ENST00000532032 PDIA6Q15084 440 aa12.21□□□□□ -0.45
ATXN3-215ENST00000532032 PAXIP1Q6ZW49 1069 aaPredicted RBP12.21□□□□□ -0.45
ATXN3-215ENST00000532032 CFAP44Q96MT7 982 aa12.21□□□□□ -0.45
ATXN3-215ENST00000532032 ONECUT3O60422 494 aaPredicted RBP12.19□□□□□ -0.46
ATXN3-215ENST00000532032 RBM33Q96EV2 1170 aaKnown RBP12.19□□□□□ -0.46
ATXN3-215ENST00000532032 SPDYE16A6NNV3 312 aaPredicted RBP12.18□□□□□ -0.46
ATXN3-215ENST00000532032 KIAA1468Q9P260 1216 aa12.18□□□□□ -0.46
ATXN3-215ENST00000532032 E2F4Q16254 413 aa12.17□□□□□ -0.46
ATXN3-215ENST00000532032 LAPTM4BQ86VI4 370 aa12.17□□□□□ -0.46
ATXN3-215ENST00000532032 ANKK1Q8NFD2 765 aa12.17□□□□□ -0.46
ATXN3-215ENST00000532032 NISCHQ9Y2I1 1504 aa12.16□□□□□ -0.46
ATXN3-215ENST00000532032 NBR1Q14596 966 aa12.15□□□□□ -0.46
ATXN3-215ENST00000532032 WDR70Q9NW82 654 aa12.15□□□□□ -0.46
ATXN3-215ENST00000532032 TRIM6-TRIM34B2RNG4 842 aa12.14□□□□□ -0.47
ATXN3-215ENST00000532032 EN1Q05925 392 aaPredicted RBP12.14□□□□□ -0.47
ATXN3-215ENST00000532032 IFFO2Q5TF58 517 aa12.14□□□□□ -0.47
ATXN3-215ENST00000532032 ARIH1Q9Y4X5 557 aaPredicted RBP12.14□□□□□ -0.47
ATXN3-215ENST00000532032 MAP3K7O43318 606 aa12.12□□□□□ -0.47
ATXN3-215ENST00000532032 ZFRQ96KR1 1074 aaKnown RBP12.11□□□□□ -0.47
ATXN3-215ENST00000532032 SOWAHBA6NEL2 793 aa12.1□□□□□ -0.47
ATXN3-215ENST00000532032 TSR1Q2NL82 804 aaKnown RBP12.1□□□□□ -0.47
ATXN3-215ENST00000532032 SEPT9Q9UHD8 586 aaPredicted RBP12.1□□□□□ -0.47
ATXN3-215ENST00000532032 BCAMP50895 628 aa12.09□□□□□ -0.47
ATXN3-215ENST00000532032 FAM98CQ17RN3 349 aaKnown RBP12.07□□□□□ -0.48
ATXN3-215ENST00000532032 TSKSQ9UJT2 592 aa12.05□□□□□ -0.48
ATXN3-215ENST00000532032 GRXCR2A6NFK2 248 aa12.04□□□□□ -0.48
ATXN3-215ENST00000532032 NYAP1Q6ZVC0 841 aa12.04□□□□□ -0.48
ATXN3-215ENST00000532032 PACS2Q86VP3 889 aa12.04□□□□□ -0.48
ATXN3-215ENST00000532032 A0A0G2JS52 829 aa12.03□□□□□ -0.48
ATXN3-215ENST00000532032 PRIM1P49642 420 aaKnown RBP12.03□□□□□ -0.48
ATXN3-215ENST00000532032 RGS20O76081 388 aa12.02□□□□□ -0.49
ATXN3-215ENST00000532032 CERKQ8TCT0 537 aa12.02□□□□□ -0.49
ATXN3-215ENST00000532032 ITGBL1O95965 494 aaPredicted RBP12.01□□□□□ -0.49
ATXN3-215ENST00000532032 WBP1LQ9NX94 342 aa12.01□□□□□ -0.49
ATXN3-215ENST00000532032 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.01□□□□□ -0.49
ATXN3-215ENST00000532032 PRSS12P56730 875 aa12□□□□□ -0.49
ATXN3-215ENST00000532032 CDCA7LQ96GN5 454 aa12□□□□□ -0.49
ATXN3-215ENST00000532032 LRCH3Q96II8 777 aa12□□□□□ -0.49
ATXN3-215ENST00000532032 OSBPP22059 807 aa11.98□□□□□ -0.49
ATXN3-215ENST00000532032 TSR3Q9UJK0 312 aaKnown RBP11.98□□□□□ -0.49
ATXN3-215ENST00000532032 FAM198AQ9UFP1 575 aa11.96□□□□□ -0.49
ATXN3-215ENST00000532032 HPS5Q9UPZ3 1129 aa11.96□□□□□ -0.49
ATXN3-215ENST00000532032 CDHR5Q9HBB8 845 aa11.95□□□□□ -0.5
ATXN3-215ENST00000532032 NBPF26B4DH59 902 aa11.93□□□□□ -0.5
ATXN3-215ENST00000532032 SMAPO00193 183 aa11.93□□□□□ -0.5
ATXN3-215ENST00000532032 TSHZ2Q9NRE2 1034 aa11.93□□□□□ -0.5
ATXN3-215ENST00000532032 TATDN2Q93075 761 aa11.92□□□□□ -0.5
ATXN3-215ENST00000532032 RBM27Q9P2N5 1060 aaKnown RBP11.92□□□□□ -0.5
ATXN3-215ENST00000532032 C3orf80F5H4A9 247 aa11.91□□□□□ -0.5
ATXN3-215ENST00000532032 PNMA3Q9UL41 463 aa11.91□□□□□ -0.5
ATXN3-215ENST00000532032 KCNC4Q03721 635 aa11.9□□□□□ -0.5
ATXN3-215ENST00000532032 SAMD7Q7Z3H4 446 aa11.9□□□□□ -0.5
ATXN3-215ENST00000532032 PPP4CP60510 307 aa11.89□□□□□ -0.51
ATXN3-215ENST00000532032 ARHGEF1Q92888 912 aaKnown RBP11.88□□□□□ -0.51
ATXN3-215ENST00000532032 NUDT18Q6ZVK8 323 aa11.86□□□□□ -0.51
ATXN3-215ENST00000532032 TTC13Q8NBP0 860 aa11.85□□□□□ -0.51
ATXN3-215ENST00000532032 NPDC1Q9NQX5 325 aaPredicted RBP11.85□□□□□ -0.51
ATXN3-215ENST00000532032 KCNV2Q8TDN2 545 aa11.84□□□□□ -0.51
ATXN3-215ENST00000532032 PADI6Q6TGC4 694 aa11.83□□□□□ -0.52
ATXN3-215ENST00000532032 IRX2Q9BZI1 471 aaPredicted RBP11.83□□□□□ -0.52
ATXN3-215ENST00000532032 MLLT3P42568 568 aaPredicted RBP11.81□□□□□ -0.52
ATXN3-215ENST00000532032 HDGFP51858 240 aaKnown RBP11.81□□□□□ -0.52
ATXN3-215ENST00000532032 TJAP1Q5JTD0 557 aa11.78□□□□□ -0.52
ATXN3-215ENST00000532032 RNF40O75150 1001 aa11.77□□□□□ -0.53
ATXN3-215ENST00000532032 MTRQ99707 1265 aa11.75□□□□□ -0.53
ATXN3-215ENST00000532032 SWT1Q5T5J6 900 aaKnown RBP11.74□□□□□ -0.53
ATXN3-215ENST00000532032 NECTIN2Q92692 538 aa11.74□□□□□ -0.53
ATXN3-215ENST00000532032 EYA1Q99502 592 aa11.74□□□□□ -0.53
ATXN3-215ENST00000532032 IL21Q9HBE4 155 aa11.74□□□□□ -0.53
ATXN3-215ENST00000532032 APLP1P51693 650 aa11.73□□□□□ -0.53
ATXN3-215ENST00000532032 P3H3Q8IVL6 736 aa11.73□□□□□ -0.53
ATXN3-215ENST00000532032 SLF2Q8IX21 1173 aa11.73□□□□□ -0.53
ATXN3-215ENST00000532032 PTGDRQ13258 359 aa11.72□□□□□ -0.53
ATXN3-215ENST00000532032 SLC4A3P48751 1232 aa11.69□□□□□ -0.54
ATXN3-215ENST00000532032 ZNF516Q92618 1163 aa11.67□□□□□ -0.54
ATXN3-215ENST00000532032 NUTM2FA1L443 756 aa11.66□□□□□ -0.54
ATXN3-215ENST00000532032 DNAJB2P25686 324 aa11.65□□□□□ -0.54
ATXN3-215ENST00000532032 RBM46Q8TBY0 533 aaKnown RBP11.65□□□□□ -0.54
ATXN3-215ENST00000532032 SEMA3EO15041 775 aa11.64□□□□□ -0.55
ATXN3-215ENST00000532032 PPP1R18Q6NYC8 613 aa11.64□□□□□ -0.55
ATXN3-215ENST00000532032 ADGRG1Q9Y653 693 aa11.64□□□□□ -0.55
ATXN3-215ENST00000532032 COPS2P61201 443 aa11.62□□□□□ -0.55
ATXN3-215ENST00000532032 PRR14Q9BWN1 585 aa11.62□□□□□ -0.55
ATXN3-215ENST00000532032 FCHSD2O94868 740 aa11.61□□□□□ -0.55
ATXN3-215ENST00000532032 PLCB2Q00722 1185 aa11.61□□□□□ -0.55
ATXN3-215ENST00000532032 TMEM134Q9H6X4 195 aa11.61□□□□□ -0.55
ATXN3-215ENST00000532032 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.61□□□□□ -0.55
ATXN3-215ENST00000532032 NKX2-3Q8TAU0 364 aa11.6□□□□□ -0.55
ATXN3-215ENST00000532032 PRKD2Q9BZL6 878 aa11.6□□□□□ -0.55
ATXN3-215ENST00000532032 RCCD1A6NED2 376 aa11.58□□□□□ -0.56
ATXN3-215ENST00000532032 LAPTM4AQ15012 233 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms