RNA–Protein interactions for RNA: ENST00000528669.5

TM9SF1-206, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 5 BASIC

Gene TM9SF1, Length 2,425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-206ENST00000528669 PNISRQ8TF01 805 aaKnown RBP25.58■■□□□ 1.69
TM9SF1-206ENST00000528669 NUDCQ9Y266 331 aa25.56■■□□□ 1.68
TM9SF1-206ENST00000528669 SYCP2Q9BX26 1530 aa25.54■■□□□ 1.68
TM9SF1-206ENST00000528669 RGL3Q3MIN7 710 aa25.54■■□□□ 1.68
TM9SF1-206ENST00000528669 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.54■■□□□ 1.68
TM9SF1-206ENST00000528669 RSPH4AQ5TD94 716 aa25.52■■□□□ 1.68
TM9SF1-206ENST00000528669 FANCIQ9NVI1 1328 aa25.51■■□□□ 1.67
TM9SF1-206ENST00000528669 CCDC144AA2RUR9 1427 aa25.51■■□□□ 1.67
TM9SF1-206ENST00000528669 TTC37Q6PGP7 1564 aa25.51■■□□□ 1.67
TM9SF1-206ENST00000528669 ARHGAP5Q13017 1502 aa25.5■■□□□ 1.67
TM9SF1-206ENST00000528669 CHD1O14646 1710 aa25.49■■□□□ 1.67
TM9SF1-206ENST00000528669 NBPF1Q3BBV0 1214 aa25.48■■□□□ 1.67
TM9SF1-206ENST00000528669 PRAG1Q86YV5 1406 aa25.48■■□□□ 1.67
TM9SF1-206ENST00000528669 MYBBP1AQ9BQG0 1328 aaKnown RBP25.47■■□□□ 1.67
TM9SF1-206ENST00000528669 E9PCH4 1651 aa25.47■■□□□ 1.67
TM9SF1-206ENST00000528669 TRPM1Q7Z4N2 1603 aa25.47■■□□□ 1.67
TM9SF1-206ENST00000528669 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.46■■□□□ 1.67
TM9SF1-206ENST00000528669 PLA2R1Q13018 1463 aa25.45■■□□□ 1.66
TM9SF1-206ENST00000528669 RALBP1Q15311 655 aa25.44■■□□□ 1.66
TM9SF1-206ENST00000528669 BRD4O60885 1362 aaPredicted RBP25.43■■□□□ 1.66
TM9SF1-206ENST00000528669 RNF123Q5XPI4 1314 aa25.43■■□□□ 1.66
TM9SF1-206ENST00000528669 UNC13BO14795 1591 aa25.43■■□□□ 1.66
TM9SF1-206ENST00000528669 LRPPRCP42704 1394 aaKnown RBP25.43■■□□□ 1.66
TM9SF1-206ENST00000528669 PLEKHH2Q8IVE3 1493 aa25.41■■□□□ 1.66
TM9SF1-206ENST00000528669 MAST1Q9Y2H9 1570 aa25.41■■□□□ 1.66
TM9SF1-206ENST00000528669 A2MP01023 1474 aa25.41■■□□□ 1.66
TM9SF1-206ENST00000528669 ERCC6L2Q5T890 1561 aa25.4■■□□□ 1.66
TM9SF1-206ENST00000528669 KTN1Q86UP2 1357 aaKnown RBP25.39■■□□□ 1.66
TM9SF1-206ENST00000528669 MYO5CQ9NQX4 1742 aa25.38■■□□□ 1.65
TM9SF1-206ENST00000528669 SHROOM2Q13796 1616 aa25.36■■□□□ 1.65
TM9SF1-206ENST00000528669 CCDC136Q96JN2 1154 aa25.36■■□□□ 1.65
TM9SF1-206ENST00000528669 SALL2Q9Y467 1007 aaPredicted RBP25.36■■□□□ 1.65
TM9SF1-206ENST00000528669 IQGAP3Q86VI3 1631 aa25.35■■□□□ 1.65
TM9SF1-206ENST00000528669 PLXNC1O60486 1568 aa25.34■■□□□ 1.65
TM9SF1-206ENST00000528669 ABCC2Q92887 1545 aa25.34■■□□□ 1.65
TM9SF1-206ENST00000528669 GPRASP1Q5JY77 1395 aa25.33■■□□□ 1.65
TM9SF1-206ENST00000528669 PARD3Q8TEW0 1356 aa25.33■■□□□ 1.65
TM9SF1-206ENST00000528669 ERICH6Q7L0X2 663 aa25.33■■□□□ 1.64
TM9SF1-206ENST00000528669 NLRP13Q86W25 1043 aa25.32■■□□□ 1.64
TM9SF1-206ENST00000528669 DISP3Q9P2K9 1392 aa25.32■■□□□ 1.64
TM9SF1-206ENST00000528669 PER1O15534 1290 aaPredicted RBP25.32■■□□□ 1.64
TM9SF1-206ENST00000528669 TESK2Q96S53 571 aa25.31■■□□□ 1.64
TM9SF1-206ENST00000528669 DUOX2Q9NRD8 1548 aa25.3■■□□□ 1.64
TM9SF1-206ENST00000528669 COL17A1Q9UMD9 1497 aaPredicted RBP25.3■■□□□ 1.64
TM9SF1-206ENST00000528669 CC2D1BQ5T0F9 858 aaKnown RBP25.29■■□□□ 1.64
TM9SF1-206ENST00000528669 PRDM15P57071 1507 aaPredicted RBP25.29■■□□□ 1.64
TM9SF1-206ENST00000528669 LAMC1P11047 1609 aa25.26■■□□□ 1.63
TM9SF1-206ENST00000528669 PANK3Q9H999 370 aa25.25■■□□□ 1.63
TM9SF1-206ENST00000528669 ERBINQ96RT1 1412 aa25.25■■□□□ 1.63
TM9SF1-206ENST00000528669 PLCH2O75038 1416 aa25.23■■□□□ 1.63
TM9SF1-206ENST00000528669 MAGI2Q86UL8 1455 aa25.23■■□□□ 1.63
TM9SF1-206ENST00000528669 EIF2AK4Q9P2K8 1649 aaKnown RBP25.23■■□□□ 1.63
TM9SF1-206ENST00000528669 EFCAB2Q5VUJ9 269 aa25.22■■□□□ 1.63
TM9SF1-206ENST00000528669 RRP1P56182 461 aaKnown RBP25.22■■□□□ 1.63
TM9SF1-206ENST00000528669 ATP10AO60312 1499 aa25.21■■□□□ 1.63
TM9SF1-206ENST00000528669 TMF1P82094 1093 aa25.21■■□□□ 1.63
TM9SF1-206ENST00000528669 ZCCHC11Q5TAX3 1644 aaKnown RBP25.21■■□□□ 1.63
TM9SF1-206ENST00000528669 TRAPPC8Q9Y2L5 1435 aa25.21■■□□□ 1.63
TM9SF1-206ENST00000528669 RCAN3Q9UKA8 241 aa25.2■■□□□ 1.62
TM9SF1-206ENST00000528669 CDCA7LQ96GN5 454 aa25.18■■□□□ 1.62
TM9SF1-206ENST00000528669 ABCC1P33527 1531 aa25.17■■□□□ 1.62
TM9SF1-206ENST00000528669 EXOC6Q8TAG9 804 aa25.17■■□□□ 1.62
TM9SF1-206ENST00000528669 WASHC2CQ9Y4E1 1318 aa25.16■■□□□ 1.62
TM9SF1-206ENST00000528669 PDE3BQ13370 1112 aa25.13■■□□□ 1.61
TM9SF1-206ENST00000528669 AFAP1Q8N556 730 aa25.13■■□□□ 1.61
TM9SF1-206ENST00000528669 RNF17Q9BXT8 1623 aaKnown RBP25.13■■□□□ 1.61
TM9SF1-206ENST00000528669 SPAG9O60271 1321 aaKnown RBP25.11■■□□□ 1.61
TM9SF1-206ENST00000528669 BLMP54132 1417 aaPredicted RBP25.08■■□□□ 1.61
TM9SF1-206ENST00000528669 MADDQ8WXG6 1647 aa25.08■■□□□ 1.61
TM9SF1-206ENST00000528669 UHRF1BP1LA0JNW5 1464 aa25.06■■□□□ 1.6
TM9SF1-206ENST00000528669 NOP58Q9Y2X3 529 aaKnown RBP25.06■■□□□ 1.6
TM9SF1-206ENST00000528669 WDR7Q9Y4E6 1490 aa25.05■■□□□ 1.6
TM9SF1-206ENST00000528669 PLIN1O60240 522 aa25.04■■□□□ 1.6
TM9SF1-206ENST00000528669 PAK3O75914 559 aaPredicted RBP25.04■■□□□ 1.6
TM9SF1-206ENST00000528669 CLASP1Q7Z460 1538 aa25.03■■□□□ 1.6
TM9SF1-206ENST00000528669 ZFYVE16Q7Z3T8 1539 aa25.03■■□□□ 1.6
TM9SF1-206ENST00000528669 IQGAP1P46940 1657 aa25.03■■□□□ 1.6
TM9SF1-206ENST00000528669 TRPM2O94759 1503 aa25.03■■□□□ 1.6
TM9SF1-206ENST00000528669 ADAMTS8Q9UP79 889 aa25.02■■□□□ 1.6
TM9SF1-206ENST00000528669 KNSTRNQ9Y448 316 aa25.02■■□□□ 1.6
TM9SF1-206ENST00000528669 SPHKAPQ2M3C7 1700 aa25.02■■□□□ 1.6
TM9SF1-206ENST00000528669 CLTCL1P53675 1640 aa25.01■■□□□ 1.59
TM9SF1-206ENST00000528669 CEP152O94986 1710 aa25.01■■□□□ 1.59
TM9SF1-206ENST00000528669 RTEL1-TNFRSF6BF6WH68 1400 aa25■■□□□ 1.59
TM9SF1-206ENST00000528669 INSRP06213 1382 aa25■■□□□ 1.59
TM9SF1-206ENST00000528669 ANP32AP39687 249 aaKnown RBP25■■□□□ 1.59
TM9SF1-206ENST00000528669 PPP2R1AP30153 589 aa24.98■■□□□ 1.59
TM9SF1-206ENST00000528669 ZMYM4Q5VZL5 1548 aa24.98■■□□□ 1.59
TM9SF1-206ENST00000528669 PTPRTO14522 1441 aa24.98■■□□□ 1.59
TM9SF1-206ENST00000528669 MYT1LQ9UL68 1186 aa24.97■■□□□ 1.59
TM9SF1-206ENST00000528669 SCAF11Q99590 1463 aaKnown RBP24.97■■□□□ 1.59
TM9SF1-206ENST00000528669 AMER1Q5JTC6 1135 aaPredicted RBP24.96■■□□□ 1.59
TM9SF1-206ENST00000528669 IPO9Q96P70 1041 aaKnown RBP24.95■■□□□ 1.58
TM9SF1-206ENST00000528669 DEPDC5O75140 1603 aa24.95■■□□□ 1.58
TM9SF1-206ENST00000528669 KIF3BO15066 747 aa24.94■■□□□ 1.58
TM9SF1-206ENST00000528669 WDR43Q15061 677 aaKnown RBP eCLIP24.93■■□□□ 1.58
TM9SF1-206ENST00000528669 CRBNQ96SW2 442 aa24.93■■□□□ 1.58
TM9SF1-206ENST00000528669 TET3O43151 1660 aa24.93■■□□□ 1.58
TM9SF1-206ENST00000528669 SCAPERQ9BY12 1400 aa24.92■■□□□ 1.58
TM9SF1-206ENST00000528669 CDCA8Q53HL2 280 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms