RNA–Protein interactions for RNA: ENST00000526702.1

SNX15-205, Transcript of sorting nexin 15, humanhuman

TSL 2

Gene SNX15, Length 4,713 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX15-205ENST00000526702 U2AF1Q01081 240 aaKnown RBP eCLIP15.82■□□□□ 0.12
SNX15-205ENST00000526702 TSHZ2Q9NRE2 1034 aa15.82■□□□□ 0.12
SNX15-205ENST00000526702 C9orf84Q5VXU9 1444 aa15.81■□□□□ 0.12
SNX15-205ENST00000526702 VGFO15240 615 aaPredicted RBP15.81■□□□□ 0.12
SNX15-205ENST00000526702 ZBTB7CA1YPR0 619 aa15.81■□□□□ 0.12
SNX15-205ENST00000526702 ARHGAP5Q13017 1502 aa15.81■□□□□ 0.12
SNX15-205ENST00000526702 PLEKHH2Q8IVE3 1493 aa15.81■□□□□ 0.12
SNX15-205ENST00000526702 HAP1P54257 671 aaPredicted RBP15.8■□□□□ 0.12
SNX15-205ENST00000526702 TCERG1O14776 1098 aaKnown RBP15.8■□□□□ 0.12
SNX15-205ENST00000526702 TRAK1Q9UPV9 953 aa15.79■□□□□ 0.12
SNX15-205ENST00000526702 CDK13Q14004 1512 aaKnown RBP15.78■□□□□ 0.12
SNX15-205ENST00000526702 CALD1Q05682 793 aaKnown RBP15.78■□□□□ 0.12
SNX15-205ENST00000526702 IPO8O15397 1037 aaKnown RBP15.77■□□□□ 0.11
SNX15-205ENST00000526702 DNAJC5BQ9UF47 199 aa15.76■□□□□ 0.11
SNX15-205ENST00000526702 MAGI1Q96QZ7 1491 aaPredicted RBP15.76■□□□□ 0.11
SNX15-205ENST00000526702 CASC1Q6TDU7 716 aa15.76■□□□□ 0.11
SNX15-205ENST00000526702 GRIN2AQ12879 1464 aa15.75■□□□□ 0.11
SNX15-205ENST00000526702 WDR97A6NE52 1622 aa15.73■□□□□ 0.11
SNX15-205ENST00000526702 EVC2Q86UK5 1308 aa15.73■□□□□ 0.11
SNX15-205ENST00000526702 NGEFQ8N5V2 710 aa15.73■□□□□ 0.11
SNX15-205ENST00000526702 NBPF8Q3BBV2 869 aa15.73■□□□□ 0.11
SNX15-205ENST00000526702 PTPN23Q9H3S7 1636 aa15.73■□□□□ 0.11
SNX15-205ENST00000526702 NUTM2DQ5VT03 806 aaPredicted RBP15.72■□□□□ 0.11
SNX15-205ENST00000526702 AFAP1Q8N556 730 aa15.72■□□□□ 0.11
SNX15-205ENST00000526702 CGNL1Q0VF96 1302 aa15.71■□□□□ 0.11
SNX15-205ENST00000526702 CCDC146Q8IYE0 955 aa15.71■□□□□ 0.11
SNX15-205ENST00000526702 PLEKHG5O94827 1062 aa15.7■□□□□ 0.1
SNX15-205ENST00000526702 RWDD1Q9H446 243 aaPredicted RBP15.7■□□□□ 0.1
SNX15-205ENST00000526702 BRD4O60885 1362 aaPredicted RBP15.7■□□□□ 0.1
SNX15-205ENST00000526702 GLIPR1L2Q4G1C9 344 aa15.69■□□□□ 0.1
SNX15-205ENST00000526702 GOLGA6L22H0YM25 854 aa15.69■□□□□ 0.1
SNX15-205ENST00000526702 CENPJQ9HC77 1338 aaPredicted RBP15.69■□□□□ 0.1
SNX15-205ENST00000526702 ABCC5O15440 1437 aa15.68■□□□□ 0.1
SNX15-205ENST00000526702 THOC2Q8NI27 1593 aaKnown RBP15.68■□□□□ 0.1
SNX15-205ENST00000526702 TRHP20396 242 aaPredicted RBP15.68■□□□□ 0.1
SNX15-205ENST00000526702 RRP1P56182 461 aaKnown RBP15.68■□□□□ 0.1
SNX15-205ENST00000526702 PMFBP1Q8TBY8 1022 aa15.68■□□□□ 0.1
SNX15-205ENST00000526702 RTF1Q92541 710 aaKnown RBP15.67■□□□□ 0.1
SNX15-205ENST00000526702 E9PSI1 815 aa15.67■□□□□ 0.1
SNX15-205ENST00000526702 CYB5RLQ6IPT4 315 aa15.67■□□□□ 0.1
SNX15-205ENST00000526702 EID1Q9Y6B2 187 aa15.67■□□□□ 0.1
SNX15-205ENST00000526702 ANKRD30BQ9BXX2 1392 aa15.66■□□□□ 0.1
SNX15-205ENST00000526702 LMOD2Q6P5Q4 547 aa15.66■□□□□ 0.1
SNX15-205ENST00000526702 AKNAQ7Z591 1439 aa15.66■□□□□ 0.1
SNX15-205ENST00000526702 PLB1Q6P1J6 1458 aa15.66■□□□□ 0.1
SNX15-205ENST00000526702 CFAP44Q96MT7 982 aa15.66■□□□□ 0.1
SNX15-205ENST00000526702 CAMSAP2Q08AD1 1489 aa15.65■□□□□ 0.1
SNX15-205ENST00000526702 SOX12O15370 315 aa15.65■□□□□ 0.1
SNX15-205ENST00000526702 ZNF608Q9ULD9 1512 aaPredicted RBP15.63■□□□□ 0.09
SNX15-205ENST00000526702 LMOD3Q0VAK6 560 aa15.63■□□□□ 0.09
SNX15-205ENST00000526702 CCDC141Q6ZP82 1450 aa15.63■□□□□ 0.09
SNX15-205ENST00000526702 SMC4Q9NTJ3 1288 aa15.63■□□□□ 0.09
SNX15-205ENST00000526702 ITPRIPQ8IWB1 547 aa15.62■□□□□ 0.09
SNX15-205ENST00000526702 ARHGEF11O15085 1522 aa15.61■□□□□ 0.09
SNX15-205ENST00000526702 NCOA1Q15788 1441 aa15.61■□□□□ 0.09
SNX15-205ENST00000526702 NBPF1Q3BBV0 1214 aa15.6■□□□□ 0.09
SNX15-205ENST00000526702 APAF1O14727 1248 aa15.6■□□□□ 0.09
SNX15-205ENST00000526702 CENPQQ7L2Z9 268 aaPredicted RBP15.6■□□□□ 0.09
SNX15-205ENST00000526702 CHMP4AQ9BY43 222 aa15.59■□□□□ 0.09
SNX15-205ENST00000526702 NCLP19338 710 aaKnown RBP15.59■□□□□ 0.09
SNX15-205ENST00000526702 IPO9Q96P70 1041 aaKnown RBP15.59■□□□□ 0.09
SNX15-205ENST00000526702 KIF14Q15058 1648 aa15.59■□□□□ 0.09
SNX15-205ENST00000526702 EXOC6Q8TAG9 804 aa15.59■□□□□ 0.09
SNX15-205ENST00000526702 ARXQ96QS3 562 aa15.58■□□□□ 0.09
SNX15-205ENST00000526702 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.58■□□□□ 0.08
SNX15-205ENST00000526702 FAM69CQ0P6D2 419 aa15.57■□□□□ 0.08
SNX15-205ENST00000526702 HSCBQ8IWL3 235 aa15.57■□□□□ 0.08
SNX15-205ENST00000526702 MINK1Q8N4C8 1332 aaPredicted RBP15.57■□□□□ 0.08
SNX15-205ENST00000526702 SCAPERQ9BY12 1400 aa15.57■□□□□ 0.08
SNX15-205ENST00000526702 CFAP70Q5T0N1 1121 aa15.57■□□□□ 0.08
SNX15-205ENST00000526702 UGGT2Q9NYU1 1516 aa15.56■□□□□ 0.08
SNX15-205ENST00000526702 HSP90AB1P08238 724 aaKnown RBP15.56■□□□□ 0.08
SNX15-205ENST00000526702 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.56■□□□□ 0.08
SNX15-205ENST00000526702 RRP7AQ9Y3A4 280 aaKnown RBP15.56■□□□□ 0.08
SNX15-205ENST00000526702 NGDNQ8NEJ9 315 aaKnown RBP15.55■□□□□ 0.08
SNX15-205ENST00000526702 RPRD2Q5VT52 1461 aaKnown RBP15.55■□□□□ 0.08
SNX15-205ENST00000526702 PLIN1O60240 522 aa15.55■□□□□ 0.08
SNX15-205ENST00000526702 CLUAP1Q96AJ1 413 aa15.55■□□□□ 0.08
SNX15-205ENST00000526702 PAK3O75914 559 aaPredicted RBP15.54■□□□□ 0.08
SNX15-205ENST00000526702 RUNDC1Q96C34 613 aa15.54■□□□□ 0.08
SNX15-205ENST00000526702 COG3Q96JB2 828 aa15.54■□□□□ 0.08
SNX15-205ENST00000526702 CRBNQ96SW2 442 aa15.54■□□□□ 0.08
SNX15-205ENST00000526702 OS9Q13438 667 aaPredicted RBP15.54■□□□□ 0.08
SNX15-205ENST00000526702 PNISRQ8TF01 805 aaKnown RBP15.53■□□□□ 0.08
SNX15-205ENST00000526702 CTTNBP2Q8WZ74 1663 aa15.53■□□□□ 0.08
SNX15-205ENST00000526702 MAPKBP1O60336 1514 aa15.52■□□□□ 0.07
SNX15-205ENST00000526702 PTPRKQ15262 1439 aa15.52■□□□□ 0.07
SNX15-205ENST00000526702 PPP2R1AP30153 589 aa15.52■□□□□ 0.07
SNX15-205ENST00000526702 ZKSCAN2Q63HK3 967 aa15.52■□□□□ 0.07
SNX15-205ENST00000526702 ERBINQ96RT1 1412 aa15.51■□□□□ 0.07
SNX15-205ENST00000526702 DIAPH1O60610 1272 aaKnown RBP15.51■□□□□ 0.07
SNX15-205ENST00000526702 ADAMTS8Q9UP79 889 aa15.51■□□□□ 0.07
SNX15-205ENST00000526702 GPATCH8Q9UKJ3 1502 aaKnown RBP15.51■□□□□ 0.07
SNX15-205ENST00000526702 STK31Q9BXU1 1019 aa15.51■□□□□ 0.07
SNX15-205ENST00000526702 FANCIQ9NVI1 1328 aa15.51■□□□□ 0.07
SNX15-205ENST00000526702 PDE4AP27815 886 aa15.5■□□□□ 0.07
SNX15-205ENST00000526702 A0A0G2JS52 829 aa15.5■□□□□ 0.07
SNX15-205ENST00000526702 RPGRIP1LQ68CZ1 1315 aa15.5■□□□□ 0.07
SNX15-205ENST00000526702 AMPHP49418 695 aa15.49■□□□□ 0.07
SNX15-205ENST00000526702 TMEM132EQ6IEE7 984 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms