RNA–Protein interactions for RNA: ENST00000523271.1

EXTL3-214, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 2

Gene EXTL3, Length 8,257 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-214ENST00000523271 FAM184AQ8NB25 1140 aa15.26■□□□□ 0.03
EXTL3-214ENST00000523271 MFAP1P55081 439 aaKnown RBP15.26■□□□□ 0.03
EXTL3-214ENST00000523271 CCDC66A2RUB6 948 aa15.25■□□□□ 0.03
EXTL3-214ENST00000523271 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.24■□□□□ 0.03
EXTL3-214ENST00000523271 ERCC4Q92889 916 aaPredicted RBP15.24■□□□□ 0.03
EXTL3-214ENST00000523271 IPO9Q96P70 1041 aaKnown RBP15.24■□□□□ 0.03
EXTL3-214ENST00000523271 STK31Q9BXU1 1019 aa15.23■□□□□ 0.03
EXTL3-214ENST00000523271 GOLGA3Q08378 1498 aa15.23■□□□□ 0.03
EXTL3-214ENST00000523271 MORC1Q86VD1 984 aa15.22■□□□□ 0.03
EXTL3-214ENST00000523271 LRRFIP1Q32MZ4 808 aaKnown RBP15.22■□□□□ 0.03
EXTL3-214ENST00000523271 TOMM22Q9NS69 142 aa15.22■□□□□ 0.03
EXTL3-214ENST00000523271 INCENPQ9NQS7 918 aa15.22■□□□□ 0.03
EXTL3-214ENST00000523271 TIMELESSQ9UNS1 1208 aa15.21■□□□□ 0.03
EXTL3-214ENST00000523271 FRAT2O75474 233 aaPredicted RBP15.21■□□□□ 0.03
EXTL3-214ENST00000523271 SYNE3Q6ZMZ3 975 aa15.21■□□□□ 0.02
EXTL3-214ENST00000523271 AMOTL1Q8IY63 956 aa15.21■□□□□ 0.02
EXTL3-214ENST00000523271 NAP1L1P55209 391 aaKnown RBP15.2■□□□□ 0.02
EXTL3-214ENST00000523271 ZNF330Q9Y3S2 320 aaPredicted RBP15.2■□□□□ 0.02
EXTL3-214ENST00000523271 CAGE1Q8TC20 777 aa15.2■□□□□ 0.02
EXTL3-214ENST00000523271 GOLGA6L7A0A1B0GV03 622 aa15.2■□□□□ 0.02
EXTL3-214ENST00000523271 TRIM29Q14134 588 aa15.2■□□□□ 0.02
EXTL3-214ENST00000523271 HSP90AB2PQ58FF8 381 aa15.19■□□□□ 0.02
EXTL3-214ENST00000523271 KANK1Q14678 1352 aa15.19■□□□□ 0.02
EXTL3-214ENST00000523271 MNS1Q8NEH6 495 aa15.19■□□□□ 0.02
EXTL3-214ENST00000523271 SRPK2P78362 688 aaKnown RBP15.19■□□□□ 0.02
EXTL3-214ENST00000523271 CPLX2Q6PUV4 134 aaKnown RBP15.18■□□□□ 0.02
EXTL3-214ENST00000523271 PLCD4Q9BRC7 762 aa15.18■□□□□ 0.02
EXTL3-214ENST00000523271 FAM13BQ9NYF5 915 aa15.18■□□□□ 0.02
EXTL3-214ENST00000523271 CTDP1Q9Y5B0 961 aaPredicted RBP15.18■□□□□ 0.02
EXTL3-214ENST00000523271 DDX49Q9Y6V7 483 aaKnown RBP15.18■□□□□ 0.02
EXTL3-214ENST00000523271 DYDC1Q8WWB3 177 aa15.18■□□□□ 0.02
EXTL3-214ENST00000523271 KTN1Q86UP2 1357 aaKnown RBP15.18■□□□□ 0.02
EXTL3-214ENST00000523271 PLEKHD1A6NEE1 506 aa15.18■□□□□ 0.02
EXTL3-214ENST00000523271 CHMP7Q8WUX9 453 aaPredicted RBP15.18■□□□□ 0.02
EXTL3-214ENST00000523271 CCDC43Q96MW1 224 aaKnown RBP15.18■□□□□ 0.02
EXTL3-214ENST00000523271 ANKRD18AQ8IVF6 992 aa15.17■□□□□ 0.02
EXTL3-214ENST00000523271 TRIM34Q9BYJ4 488 aa15.17■□□□□ 0.02
EXTL3-214ENST00000523271 EPS15P42566 896 aa15.16■□□□□ 0.02
EXTL3-214ENST00000523271 RCAN3Q9UKA8 241 aa15.16■□□□□ 0.02
EXTL3-214ENST00000523271 NOL8Q76FK4 1167 aaKnown RBP15.16■□□□□ 0.02
EXTL3-214ENST00000523271 HSP90AB3PQ58FF7 597 aa15.16■□□□□ 0.02
EXTL3-214ENST00000523271 LEKR1Q6ZMV7 388 aa15.16■□□□□ 0.02
EXTL3-214ENST00000523271 CEP164Q9UPV0 1460 aa15.15■□□□□ 0.02
EXTL3-214ENST00000523271 BAZ1AQ9NRL2 1556 aaPredicted RBP15.15■□□□□ 0.02
EXTL3-214ENST00000523271 HDGFL2Q7Z4V5 671 aaPredicted RBP15.15■□□□□ 0.02
EXTL3-214ENST00000523271 DIAPH3Q9NSV4 1193 aa15.15■□□□□ 0.02
EXTL3-214ENST00000523271 MCTP1Q6DN14 999 aa15.14■□□□□ 0.01
EXTL3-214ENST00000523271 SOX12O15370 315 aa15.14■□□□□ 0.01
EXTL3-214ENST00000523271 KCNH8Q96L42 1107 aa15.14■□□□□ 0.01
EXTL3-214ENST00000523271 NOL10Q9BSC4 688 aaKnown RBP15.14■□□□□ 0.01
EXTL3-214ENST00000523271 R3HCC1Q9Y3T6 440 aaKnown RBP15.14■□□□□ 0.01
EXTL3-214ENST00000523271 CLIP1P30622 1438 aa15.13■□□□□ 0.01
EXTL3-214ENST00000523271 GSE1Q14687 1217 aa15.13■□□□□ 0.01
EXTL3-214ENST00000523271 NEFHP12036 1026 aa15.12■□□□□ 0.01
EXTL3-214ENST00000523271 FOXD4L1Q9NU39 408 aa15.12■□□□□ 0.01
EXTL3-214ENST00000523271 CCER2I3L3R5 266 aa15.12■□□□□ 0.01
EXTL3-214ENST00000523271 NAT10Q9H0A0 1025 aaKnown RBP15.12■□□□□ 0.01
EXTL3-214ENST00000523271 ZFYVE27Q5T4F4 411 aa15.11■□□□□ 0.01
EXTL3-214ENST00000523271 ERLIN2O94905 339 aa15.11■□□□□ 0.01
EXTL3-214ENST00000523271 TSPYL1Q9H0U9 437 aa15.11■□□□□ 0.01
EXTL3-214ENST00000523271 MYO15BQ96JP2 1530 aa15.11■□□□□ 0.01
EXTL3-214ENST00000523271 FOXD4L5Q5VV16 416 aaPredicted RBP15.11■□□□□ 0.01
EXTL3-214ENST00000523271 FOXD4L4Q8WXT5 416 aaPredicted RBP15.11■□□□□ 0.01
EXTL3-214ENST00000523271 SMC4Q9NTJ3 1288 aa15.1■□□□□ 0.01
EXTL3-214ENST00000523271 GOLGA6L10A6NI86 522 aa15.1■□□□□ 0.01
EXTL3-214ENST00000523271 MEX3CQ5U5Q3 659 aaKnown RBP15.1■□□□□ 0.01
EXTL3-214ENST00000523271 EZRP15311 586 aaKnown RBP15.1■□□□□ 0.01
EXTL3-214ENST00000523271 KIAA0754O94854 1291 aa15.1■□□□□ 0.01
EXTL3-214ENST00000523271 CSB-PGBD3P0DP91 1061 aa15.1■□□□□ 0.01
EXTL3-214ENST00000523271 SEPT7Q16181 437 aaKnown RBP15.1■□□□□ 0.01
EXTL3-214ENST00000523271 USP8P40818 1118 aa15.09■□□□□ 0.01
EXTL3-214ENST00000523271 SASS6Q6UVJ0 657 aa15.09■□□□□ 0.01
EXTL3-214ENST00000523271 CFDP1Q9UEE9 299 aaPredicted RBP15.09■□□□□ 0.01
EXTL3-214ENST00000523271 IFT57Q9NWB7 429 aa15.09■□□□□ 0.01
EXTL3-214ENST00000523271 OFD1O75665 1012 aa15.09■□□□□ 0.01
EXTL3-214ENST00000523271 FAM43AQ8N2R8 423 aa15.09■□□□□ 0.01
EXTL3-214ENST00000523271 FHAD1B1AJZ9 1412 aa15.08■□□□□ 0.01
EXTL3-214ENST00000523271 GTF2E1P29083 439 aaPredicted RBP15.08■□□□□ 0.01
EXTL3-214ENST00000523271 LMOD3Q0VAK6 560 aa15.08■□□□□ 0
EXTL3-214ENST00000523271 CCP110O43303 1012 aa15.08■□□□□ 0
EXTL3-214ENST00000523271 EIF3AQ14152 1382 aaKnown RBP15.07■□□□□ 0
EXTL3-214ENST00000523271 RUFY2Q8WXA3 655 aa15.06■□□□□ 0
EXTL3-214ENST00000523271 CLASRPQ8N2M8 674 aaKnown RBP15.06■□□□□ 0
EXTL3-214ENST00000523271 PAF1Q8N7H5 531 aa15.06■□□□□ 0
EXTL3-214ENST00000523271 U2AF1L5P0DN76 240 aaPredicted RBP15.05■□□□□ -0
EXTL3-214ENST00000523271 U2AF1Q01081 240 aaKnown RBP eCLIP15.05■□□□□ -0
EXTL3-214ENST00000523271 CPLX1O14810 134 aa15.05■□□□□ -0
EXTL3-214ENST00000523271 PAK3O75914 559 aaPredicted RBP15.05■□□□□ -0
EXTL3-214ENST00000523271 OLFM4Q6UX06 510 aa15.05■□□□□ -0
EXTL3-214ENST00000523271 BICD2Q8TD16 824 aa15.05■□□□□ -0
EXTL3-214ENST00000523271 WWC2Q6AWC2 1192 aa15.04■□□□□ -0
EXTL3-214ENST00000523271 SLC4A10Q6U841 1118 aa15.04■□□□□ -0
EXTL3-214ENST00000523271 ZKSCAN1P17029 563 aaPredicted RBP15.04■□□□□ -0
EXTL3-214ENST00000523271 ENOX2Q16206 610 aaKnown RBP15.04■□□□□ -0
EXTL3-214ENST00000523271 CGNL1Q0VF96 1302 aa15.04■□□□□ -0
EXTL3-214ENST00000523271 RALBP1Q15311 655 aa15.04■□□□□ -0
EXTL3-214ENST00000523271 CWC22Q9HCG8 908 aaKnown RBP15.04■□□□□ -0
EXTL3-214ENST00000523271 CT47B1P0C2W7 299 aaPredicted RBP15.04■□□□□ -0
EXTL3-214ENST00000523271 AXDND1Q5T1B0 1012 aaPredicted RBP15.03■□□□□ -0
EXTL3-214ENST00000523271 TNIKQ9UKE5 1360 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms