RNA–Protein interactions for RNA: ENST00000522778.1

LINC01609-202, Transcript of long intergenic non-protein coding RNA 1609, humanhuman

TSL 2 BASIC

Gene LINC01609, Length 566 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01609-202ENST00000522778 RBM33Q96EV2 1170 aaKnown RBP13.35□□□□□ -0.27
LINC01609-202ENST00000522778 NBR1Q14596 966 aa13.34□□□□□ -0.27
LINC01609-202ENST00000522778 ZBED2Q9BTP6 218 aa13.34□□□□□ -0.27
LINC01609-202ENST00000522778 NISCHQ9Y2I1 1504 aa13.34□□□□□ -0.27
LINC01609-202ENST00000522778 PPP1R3GB7ZBB8 358 aa13.33□□□□□ -0.28
LINC01609-202ENST00000522778 SLC4A5Q9BY07 1137 aa13.33□□□□□ -0.28
LINC01609-202ENST00000522778 ARIH1Q9Y4X5 557 aaPredicted RBP13.33□□□□□ -0.28
LINC01609-202ENST00000522778 COL9A1P20849 921 aa13.3□□□□□ -0.28
LINC01609-202ENST00000522778 C6orf132Q5T0Z8 1188 aa13.29□□□□□ -0.28
LINC01609-202ENST00000522778 GRXCR2A6NFK2 248 aa13.28□□□□□ -0.28
LINC01609-202ENST00000522778 MAP3K7O43318 606 aa13.28□□□□□ -0.28
LINC01609-202ENST00000522778 KCTD12Q96CX2 325 aaKnown RBP13.27□□□□□ -0.29
LINC01609-202ENST00000522778 EN1Q05925 392 aaPredicted RBP13.26□□□□□ -0.29
LINC01609-202ENST00000522778 PROX2Q3B8N5 592 aa13.26□□□□□ -0.29
LINC01609-202ENST00000522778 ABCC9O60706 1549 aa13.25□□□□□ -0.29
LINC01609-202ENST00000522778 KCNV2Q8TDN2 545 aa13.25□□□□□ -0.29
LINC01609-202ENST00000522778 MRPL50Q8N5N7 158 aaKnown RBP13.24□□□□□ -0.29
LINC01609-202ENST00000522778 NBPF3Q9H094 633 aa13.24□□□□□ -0.29
LINC01609-202ENST00000522778 GOLGA8CPA6NN73 597 aa13.23□□□□□ -0.29
LINC01609-202ENST00000522778 BHMG1C9JSJ3 638 aaPredicted RBP13.23□□□□□ -0.29
LINC01609-202ENST00000522778 HAP1P54257 671 aaPredicted RBP13.23□□□□□ -0.29
LINC01609-202ENST00000522778 TSR1Q2NL82 804 aaKnown RBP13.23□□□□□ -0.29
LINC01609-202ENST00000522778 ARHGEF1Q92888 912 aaKnown RBP13.22□□□□□ -0.29
LINC01609-202ENST00000522778 HCSTQ9UBK5 93 aa13.21□□□□□ -0.29
LINC01609-202ENST00000522778 RABGEF1Q9UJ41 708 aa13.2□□□□□ -0.3
LINC01609-202ENST00000522778 P3H3Q8IVL6 736 aa13.19□□□□□ -0.3
LINC01609-202ENST00000522778 PRIM1P49642 420 aaKnown RBP13.17□□□□□ -0.3
LINC01609-202ENST00000522778 OSBPP22059 807 aa13.16□□□□□ -0.3
LINC01609-202ENST00000522778 WNT2BQ93097 391 aa13.16□□□□□ -0.3
LINC01609-202ENST00000522778 KIAA1468Q9P260 1216 aa13.16□□□□□ -0.3
LINC01609-202ENST00000522778 TRIM6-TRIM34B2RNG4 842 aa13.15□□□□□ -0.3
LINC01609-202ENST00000522778 PTPN5P54829 565 aa13.13□□□□□ -0.31
LINC01609-202ENST00000522778 ONECUT3O60422 494 aaPredicted RBP13.11□□□□□ -0.31
LINC01609-202ENST00000522778 MLLT3P42568 568 aaPredicted RBP13.11□□□□□ -0.31
LINC01609-202ENST00000522778 CDHR5Q9HBB8 845 aa13.11□□□□□ -0.31
LINC01609-202ENST00000522778 SEPT9Q9UHD8 586 aaPredicted RBP13.11□□□□□ -0.31
LINC01609-202ENST00000522778 THSD4Q6ZMP0 1018 aa13.1□□□□□ -0.31
LINC01609-202ENST00000522778 CERKQ8TCT0 537 aa13.09□□□□□ -0.31
LINC01609-202ENST00000522778 LAPTM4BQ86VI4 370 aa13.08□□□□□ -0.32
LINC01609-202ENST00000522778 PACS2Q86VP3 889 aa13.08□□□□□ -0.32
LINC01609-202ENST00000522778 ANKK1Q8NFD2 765 aa13.08□□□□□ -0.32
LINC01609-202ENST00000522778 CDCA7LQ96GN5 454 aa13.08□□□□□ -0.32
LINC01609-202ENST00000522778 TSKSQ9UJT2 592 aa13.08□□□□□ -0.32
LINC01609-202ENST00000522778 PRSS12P56730 875 aa13.06□□□□□ -0.32
LINC01609-202ENST00000522778 ZFRQ96KR1 1074 aaKnown RBP13.05□□□□□ -0.32
LINC01609-202ENST00000522778 FAM98CQ17RN3 349 aaKnown RBP13.03□□□□□ -0.32
LINC01609-202ENST00000522778 PLA2G2EQ9NZK7 142 aa13.03□□□□□ -0.32
LINC01609-202ENST00000522778 SEMA3EO15041 775 aa13.02□□□□□ -0.33
LINC01609-202ENST00000522778 BCAMP50895 628 aa13.02□□□□□ -0.33
LINC01609-202ENST00000522778 SMAPO00193 183 aa13□□□□□ -0.33
LINC01609-202ENST00000522778 FAM198AQ9UFP1 575 aa13□□□□□ -0.33
LINC01609-202ENST00000522778 NBPF26B4DH59 902 aa12.99□□□□□ -0.33
LINC01609-202ENST00000522778 KDM2AQ9Y2K7 1162 aa12.99□□□□□ -0.33
LINC01609-202ENST00000522778 SOWAHBA6NEL2 793 aa12.98□□□□□ -0.33
LINC01609-202ENST00000522778 RBM27Q9P2N5 1060 aaKnown RBP12.98□□□□□ -0.33
LINC01609-202ENST00000522778 PNMA3Q9UL41 463 aa12.98□□□□□ -0.33
LINC01609-202ENST00000522778 NPDC1Q9NQX5 325 aaPredicted RBP12.97□□□□□ -0.33
LINC01609-202ENST00000522778 PADI6Q6TGC4 694 aa12.96□□□□□ -0.33
LINC01609-202ENST00000522778 LRCH3Q96II8 777 aa12.96□□□□□ -0.33
LINC01609-202ENST00000522778 TATDN2Q93075 761 aa12.95□□□□□ -0.34
LINC01609-202ENST00000522778 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.95□□□□□ -0.34
LINC01609-202ENST00000522778 NUTM2FA1L443 756 aa12.94□□□□□ -0.34
LINC01609-202ENST00000522778 C3orf80F5H4A9 247 aa12.94□□□□□ -0.34
LINC01609-202ENST00000522778 NUDT18Q6ZVK8 323 aa12.93□□□□□ -0.34
LINC01609-202ENST00000522778 VSIG10Q8N0Z9 540 aa12.91□□□□□ -0.34
LINC01609-202ENST00000522778 HPS5Q9UPZ3 1129 aa12.91□□□□□ -0.34
LINC01609-202ENST00000522778 PTGDRQ13258 359 aa12.9□□□□□ -0.34
LINC01609-202ENST00000522778 WBP1LQ9NX94 342 aa12.9□□□□□ -0.34
LINC01609-202ENST00000522778 TESPA1A2RU30 521 aaPredicted RBP12.89□□□□□ -0.35
LINC01609-202ENST00000522778 SAMD7Q7Z3H4 446 aa12.89□□□□□ -0.35
LINC01609-202ENST00000522778 TTC13Q8NBP0 860 aa12.89□□□□□ -0.35
LINC01609-202ENST00000522778 TSR3Q9UJK0 312 aaKnown RBP12.89□□□□□ -0.35
LINC01609-202ENST00000522778 SMYD5Q6GMV2 418 aa12.88□□□□□ -0.35
LINC01609-202ENST00000522778 RNF40O75150 1001 aa12.87□□□□□ -0.35
LINC01609-202ENST00000522778 NYAP1Q6ZVC0 841 aa12.86□□□□□ -0.35
LINC01609-202ENST00000522778 HDGFP51858 240 aaKnown RBP12.85□□□□□ -0.35
LINC01609-202ENST00000522778 FCHSD2O94868 740 aa12.84□□□□□ -0.35
LINC01609-202ENST00000522778 PPP4CP60510 307 aa12.84□□□□□ -0.35
LINC01609-202ENST00000522778 RBM26Q5T8P6 1007 aaKnown RBP12.84□□□□□ -0.35
LINC01609-202ENST00000522778 EYA1Q99502 592 aa12.79□□□□□ -0.36
LINC01609-202ENST00000522778 SWT1Q5T5J6 900 aaKnown RBP12.78□□□□□ -0.36
LINC01609-202ENST00000522778 FAM161AQ3B820 660 aa12.77□□□□□ -0.37
LINC01609-202ENST00000522778 RBM46Q8TBY0 533 aaKnown RBP12.77□□□□□ -0.37
LINC01609-202ENST00000522778 ADGRG1Q9Y653 693 aa12.77□□□□□ -0.37
LINC01609-202ENST00000522778 ITGBL1O95965 494 aaPredicted RBP12.75□□□□□ -0.37
LINC01609-202ENST00000522778 SLC4A3P48751 1232 aa12.75□□□□□ -0.37
LINC01609-202ENST00000522778 HIC1Q14526 733 aa12.75□□□□□ -0.37
LINC01609-202ENST00000522778 IFFO2Q5TF58 517 aa12.75□□□□□ -0.37
LINC01609-202ENST00000522778 SLF2Q8IX21 1173 aa12.75□□□□□ -0.37
LINC01609-202ENST00000522778 DNAJB2P25686 324 aa12.73□□□□□ -0.37
LINC01609-202ENST00000522778 TULP1O00294 542 aaPredicted RBP12.71□□□□□ -0.37
LINC01609-202ENST00000522778 KCNC4Q03721 635 aa12.71□□□□□ -0.37
LINC01609-202ENST00000522778 GPIHBP1Q8IV16 184 aa12.71□□□□□ -0.37
LINC01609-202ENST00000522778 NECTIN2Q92692 538 aa12.7□□□□□ -0.38
LINC01609-202ENST00000522778 A0A0G2JS52 829 aa12.69□□□□□ -0.38
LINC01609-202ENST00000522778 RCCD1A6NED2 376 aa12.69□□□□□ -0.38
LINC01609-202ENST00000522778 GNPATO15228 680 aa12.69□□□□□ -0.38
LINC01609-202ENST00000522778 GPR37O15354 613 aa12.67□□□□□ -0.38
LINC01609-202ENST00000522778 APLP1P51693 650 aa12.67□□□□□ -0.38
LINC01609-202ENST00000522778 TMEM134Q9H6X4 195 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms