RNA–Protein interactions for RNA: ENST00000522275.5

PCM1-215, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-215ENST00000522275 MYH16Q9H6N6 1097 aa5.93□□□□□ -1.46
PCM1-215ENST00000522275 NCAPD3P42695 1498 aa5.93□□□□□ -1.46
PCM1-215ENST00000522275 FSD2A1L4K1 749 aa5.93□□□□□ -1.46
PCM1-215ENST00000522275 TCERG1O14776 1098 aaKnown RBP5.93□□□□□ -1.46
PCM1-215ENST00000522275 SEMA3FQ13275 785 aa5.93□□□□□ -1.46
PCM1-215ENST00000522275 CBX1P83916 185 aa5.92□□□□□ -1.46
PCM1-215ENST00000522275 BANK1Q8NDB2 785 aa5.92□□□□□ -1.46
PCM1-215ENST00000522275 CDCA8Q53HL2 280 aa5.92□□□□□ -1.46
PCM1-215ENST00000522275 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.92□□□□□ -1.46
PCM1-215ENST00000522275 UQCRHLA0A096LP55 91 aa5.91□□□□□ -1.46
PCM1-215ENST00000522275 DYNC1I1O14576 645 aa5.91□□□□□ -1.46
PCM1-215ENST00000522275 PPP1R15AO75807 674 aaPredicted RBP5.91□□□□□ -1.46
PCM1-215ENST00000522275 UQCRHP07919 91 aa5.91□□□□□ -1.46
PCM1-215ENST00000522275 LMOD3Q0VAK6 560 aa5.91□□□□□ -1.46
PCM1-215ENST00000522275 MLECQ14165 292 aa5.91□□□□□ -1.46
PCM1-215ENST00000522275 NBPF20Q3BBV1 942 aa5.91□□□□□ -1.46
PCM1-215ENST00000522275 R3HCC1Q9Y3T6 440 aaKnown RBP5.91□□□□□ -1.46
PCM1-215ENST00000522275 TRIM6-TRIM34B2RNG4 842 aa5.91□□□□□ -1.46
PCM1-215ENST00000522275 SETQ01105 290 aaPredicted RBP5.91□□□□□ -1.46
PCM1-215ENST00000522275 CEP120Q8N960 986 aa5.91□□□□□ -1.46
PCM1-215ENST00000522275 TRIM34Q9BYJ4 488 aa5.91□□□□□ -1.46
PCM1-215ENST00000522275 ANAPC15P60006 121 aa5.9□□□□□ -1.46
PCM1-215ENST00000522275 MRE11P49959 708 aa5.89□□□□□ -1.47
PCM1-215ENST00000522275 HSP90AB3PQ58FF7 597 aa5.89□□□□□ -1.47
PCM1-215ENST00000522275 GPATCH11Q8N954 259 aa5.89□□□□□ -1.47
PCM1-215ENST00000522275 MS4A1P11836 297 aa5.89□□□□□ -1.47
PCM1-215ENST00000522275 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.89□□□□□ -1.471e-8■■■□□ 15.7
PCM1-215ENST00000522275 ZNF500O60304 480 aaPredicted RBP5.88□□□□□ -1.47
PCM1-215ENST00000522275 NPM1P06748 294 aaKnown RBP eCLIP5.88□□□□□ -1.47
PCM1-215ENST00000522275 CAPN2P17655 700 aa5.88□□□□□ -1.47
PCM1-215ENST00000522275 RGL3Q3MIN7 710 aa5.88□□□□□ -1.47
PCM1-215ENST00000522275 RNF217Q8TC41 542 aa5.88□□□□□ -1.47
PCM1-215ENST00000522275 STK26Q9P289 416 aa5.88□□□□□ -1.47
PCM1-215ENST00000522275 WRNQ14191 1432 aaPredicted RBP eCLIP5.87□□□□□ -1.47
PCM1-215ENST00000522275 GOLIM4O00461 696 aa5.87□□□□□ -1.47
PCM1-215ENST00000522275 CT47A1Q5JQC4 288 aaPredicted RBP5.87□□□□□ -1.47
PCM1-215ENST00000522275 ZNF771Q7L3S4 317 aaPredicted RBP5.87□□□□□ -1.47
PCM1-215ENST00000522275 CWC22Q9HCG8 908 aaKnown RBP5.87□□□□□ -1.47
PCM1-215ENST00000522275 ZBED9Q6R2W3 1325 aa5.87□□□□□ -1.47
PCM1-215ENST00000522275 SIRT1Q96EB6 747 aa5.87□□□□□ -1.47
PCM1-215ENST00000522275 TULP2O00295 520 aa5.86□□□□□ -1.47
PCM1-215ENST00000522275 MAP2K1Q02750 393 aaPredicted RBP5.86□□□□□ -1.47
PCM1-215ENST00000522275 ATP2B3Q16720 1220 aa5.86□□□□□ -1.47
PCM1-215ENST00000522275 NBPF1Q3BBV0 1214 aa5.86□□□□□ -1.47
PCM1-215ENST00000522275 NBPF11Q86T75 865 aa5.86□□□□□ -1.47
PCM1-215ENST00000522275 CEP83Q9Y592 693 aa5.86□□□□□ -1.47
PCM1-215ENST00000522275 SATB1Q01826 763 aa5.86□□□□□ -1.47
PCM1-215ENST00000522275 EFCC1Q9HA90 598 aa5.86□□□□□ -1.47
PCM1-215ENST00000522275 GRPEL1Q9HAV7 217 aa5.86□□□□□ -1.47
PCM1-215ENST00000522275 MSNP26038 577 aaKnown RBP5.85□□□□□ -1.47
PCM1-215ENST00000522275 ZSCAN30Q86W11 494 aa5.85□□□□□ -1.47
PCM1-215ENST00000522275 TIGD1Q96MW7 591 aa5.85□□□□□ -1.47
PCM1-215ENST00000522275 GZF1Q9H116 711 aaPredicted RBP5.85□□□□□ -1.47
PCM1-215ENST00000522275 DHX57Q6P158 1386 aaKnown RBP5.85□□□□□ -1.47
PCM1-215ENST00000522275 TTC36A6NLP5 189 aa5.85□□□□□ -1.47
PCM1-215ENST00000522275 BRPF1P55201 1214 aaPredicted RBP5.85□□□□□ -1.47
PCM1-215ENST00000522275 ZNF692Q9BU19 519 aaPredicted RBP5.85□□□□□ -1.47
PCM1-215ENST00000522275 CCDC66A2RUB6 948 aa5.84□□□□□ -1.47
PCM1-215ENST00000522275 CC2D2BQ6DHV5 1058 aa5.84□□□□□ -1.47
PCM1-215ENST00000522275 MYCBPQ99417 103 aaPredicted RBP5.84□□□□□ -1.47
PCM1-215ENST00000522275 TSPYL1Q9H0U9 437 aa5.84□□□□□ -1.47
PCM1-215ENST00000522275 MAFGO15525 162 aa5.84□□□□□ -1.48
PCM1-215ENST00000522275 CCDC172P0C7W6 258 aa5.84□□□□□ -1.48
PCM1-215ENST00000522275 PLCB2Q00722 1185 aa5.84□□□□□ -1.48
PCM1-215ENST00000522275 SMC4Q9NTJ3 1288 aa5.84□□□□□ -1.48
PCM1-215ENST00000522275 ATF5Q9Y2D1 282 aaPredicted RBP5.84□□□□□ -1.48
PCM1-215ENST00000522275 ZBTB12Q9Y330 459 aaPredicted RBP5.84□□□□□ -1.48
PCM1-215ENST00000522275 SGSM3Q96HU1 749 aa5.83□□□□□ -1.48
PCM1-215ENST00000522275 KIF3AQ9Y496 699 aa5.83□□□□□ -1.48
PCM1-215ENST00000522275 SPDYE4A6NLX3 237 aa5.82□□□□□ -1.48
PCM1-215ENST00000522275 ATXN8OSP0DMR3 200 aa5.82□□□□□ -1.48
PCM1-215ENST00000522275 TNNT3P45378 269 aaPredicted RBP5.82□□□□□ -1.48
PCM1-215ENST00000522275 NBPF9Q3BBW0 867 aa5.82□□□□□ -1.48
PCM1-215ENST00000522275 FAM9BQ8IZU0 186 aa5.82□□□□□ -1.48
PCM1-215ENST00000522275 NCAPGQ9BPX3 1015 aa5.82□□□□□ -1.48
PCM1-215ENST00000522275 RAI14Q9P0K7 980 aa5.82□□□□□ -1.48
PCM1-215ENST00000522275 AKNAQ7Z591 1439 aa5.82□□□□□ -1.48
PCM1-215ENST00000522275 PLEKHD1A6NEE1 506 aa5.82□□□□□ -1.48
PCM1-215ENST00000522275 GTF2A1P52655 376 aaPredicted RBP5.82□□□□□ -1.48
PCM1-215ENST00000522275 BORCS6Q96GS4 357 aa5.82□□□□□ -1.48
PCM1-215ENST00000522275 PEG3Q9GZU2 1588 aa5.82□□□□□ -1.48
PCM1-215ENST00000522275 ARID4AP29374 1257 aaPredicted RBP5.81□□□□□ -1.48
PCM1-215ENST00000522275 OTUD6BQ8N6M0 293 aa5.81□□□□□ -1.48
PCM1-215ENST00000522275 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.81□□□□□ -1.48
PCM1-215ENST00000522275 RNF123Q5XPI4 1314 aa5.81□□□□□ -1.48
PCM1-215ENST00000522275 PHLDB1Q86UU1 1377 aa5.81□□□□□ -1.48
PCM1-215ENST00000522275 SASS6Q6UVJ0 657 aa5.81□□□□□ -1.48
PCM1-215ENST00000522275 ISY1Q9ULR0 285 aaKnown RBP5.81□□□□□ -1.48
PCM1-215ENST00000522275 XPCQ01831 940 aaPredicted RBP5.8□□□□□ -1.48
PCM1-215ENST00000522275 BECN1Q14457 450 aa5.8□□□□□ -1.48
PCM1-215ENST00000522275 ZNF513Q8N8E2 541 aaPredicted RBP5.8□□□□□ -1.48
PCM1-215ENST00000522275 TERF2IPQ9NYB0 399 aa5.8□□□□□ -1.48
PCM1-215ENST00000522275 FEZ2Q9UHY8 353 aaPredicted RBP5.8□□□□□ -1.48
PCM1-215ENST00000522275 FAM50AQ14320 339 aaKnown RBP5.8□□□□□ -1.48
PCM1-215ENST00000522275 NBPF10Q6P3W6 841 aaKnown RBP5.8□□□□□ -1.48
PCM1-215ENST00000522275 ZNF710Q8N1W2 664 aa5.8□□□□□ -1.48
PCM1-215ENST00000522275 DSG3P32926 999 aa5.79□□□□□ -1.48
PCM1-215ENST00000522275 NOP2P46087 812 aaKnown RBP5.79□□□□□ -1.48
PCM1-215ENST00000522275 CALCOCO1Q9P1Z2 691 aa5.79□□□□□ -1.48
PCM1-215ENST00000522275 U3KPZ7 1027 aaPredicted RBP5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms