RNA–Protein interactions for RNA: ENST00000522013.5

CTNNA1-232, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-232ENST00000522013 UGGT2Q9NYU1 1516 aa8.84□□□□□ -0.99
CTNNA1-232ENST00000522013 CARMIL1Q5VZK9 1371 aa8.84□□□□□ -0.99
CTNNA1-232ENST00000522013 LTBP4Q8N2S1 1624 aa8.83□□□□□ -1
CTNNA1-232ENST00000522013 IQSEC2Q5JU85 1478 aa8.83□□□□□ -1
CTNNA1-232ENST00000522013 ARID3CA6NKF2 412 aa8.82□□□□□ -1
CTNNA1-232ENST00000522013 PHLDB1Q86UU1 1377 aa8.82□□□□□ -1
CTNNA1-232ENST00000522013 ABCA8O94911 1581 aa8.82□□□□□ -1
CTNNA1-232ENST00000522013 CTTNBP2Q8WZ74 1663 aa8.81□□□□□ -1
CTNNA1-232ENST00000522013 NEO1Q92859 1461 aa8.81□□□□□ -1
CTNNA1-232ENST00000522013 UHRF1BP1Q6BDS2 1440 aa8.8□□□□□ -1
CTNNA1-232ENST00000522013 UBAP1LF5GYI3 381 aa8.8□□□□□ -1
CTNNA1-232ENST00000522013 ZFYVE16Q7Z3T8 1539 aa8.8□□□□□ -1
CTNNA1-232ENST00000522013 PTPRTO14522 1441 aa8.79□□□□□ -1
CTNNA1-232ENST00000522013 AKNAQ7Z591 1439 aa8.79□□□□□ -1
CTNNA1-232ENST00000522013 CEBPAP49715 358 aaPredicted RBP8.78□□□□□ -1
CTNNA1-232ENST00000522013 EFCAB5A4FU69 1503 aa8.78□□□□□ -1
CTNNA1-232ENST00000522013 TSPYL2Q9H2G4 693 aaPredicted RBP8.77□□□□□ -1.01
CTNNA1-232ENST00000522013 FARP1Q9Y4F1 1045 aaPredicted RBP8.77□□□□□ -1.01
CTNNA1-232ENST00000522013 DENND4BO75064 1496 aaPredicted RBP8.77□□□□□ -1.01
CTNNA1-232ENST00000522013 CFAP74Q9C0B2 1584 aa8.76□□□□□ -1.01
CTNNA1-232ENST00000522013 SUPT6HQ7KZ85 1726 aaKnown RBP8.76□□□□□ -1.01
CTNNA1-232ENST00000522013 ZMYM4Q5VZL5 1548 aa8.75□□□□□ -1.01
CTNNA1-232ENST00000522013 C3P01024 1663 aa8.74□□□□□ -1.01
CTNNA1-232ENST00000522013 ARHGEF12Q9NZN5 1544 aa8.74□□□□□ -1.01
CTNNA1-232ENST00000522013 GOLGA3Q08378 1498 aa8.73□□□□□ -1.01
CTNNA1-232ENST00000522013 HSPA1LP34931 641 aa8.73□□□□□ -1.01
CTNNA1-232ENST00000522013 CADPS2Q86UW7 1296 aa8.73□□□□□ -1.01
CTNNA1-232ENST00000522013 PCDHB8Q9UN66 801 aa8.73□□□□□ -1.01
CTNNA1-232ENST00000522013 PCDHB13Q9Y5F0 798 aa8.73□□□□□ -1.01
CTNNA1-232ENST00000522013 HECW1Q76N89 1606 aa8.72□□□□□ -1.01
CTNNA1-232ENST00000522013 PIP4K2BP78356 416 aa8.72□□□□□ -1.01
CTNNA1-232ENST00000522013 RYDENQ9NUL5 291 aaKnown RBP8.72□□□□□ -1.01
CTNNA1-232ENST00000522013 ATP10BO94823 1461 aa8.71□□□□□ -1.01
CTNNA1-232ENST00000522013 RAPGEF2Q9Y4G8 1499 aa8.71□□□□□ -1.01
CTNNA1-232ENST00000522013 SUPT5HO00267 1087 aaKnown RBP8.71□□□□□ -1.02
CTNNA1-232ENST00000522013 ZNF467Q7Z7K2 595 aaPredicted RBP8.71□□□□□ -1.02
CTNNA1-232ENST00000522013 ZNF335Q9H4Z2 1342 aaPredicted RBP8.71□□□□□ -1.02
CTNNA1-232ENST00000522013 FHOD3Q2V2M9 1422 aa8.71□□□□□ -1.02
CTNNA1-232ENST00000522013 NCOA1Q15788 1441 aa8.7□□□□□ -1.02
CTNNA1-232ENST00000522013 CAMSAP1Q5T5Y3 1602 aa8.69□□□□□ -1.02
CTNNA1-232ENST00000522013 PDAP1Q13442 181 aaKnown RBP8.69□□□□□ -1.02
CTNNA1-232ENST00000522013 CCDC61Q9Y6R9 512 aa8.69□□□□□ -1.02
CTNNA1-232ENST00000522013 FAM9AQ8IZU1 332 aaPredicted RBP8.68□□□□□ -1.02
CTNNA1-232ENST00000522013 C9orf84Q5VXU9 1444 aa8.68□□□□□ -1.02
CTNNA1-232ENST00000522013 MAGI2Q86UL8 1455 aa8.68□□□□□ -1.02
CTNNA1-232ENST00000522013 SETD1AO15047 1707 aaKnown RBP8.67□□□□□ -1.02
CTNNA1-232ENST00000522013 RAPGEF6Q8TEU7 1601 aa8.67□□□□□ -1.02
CTNNA1-232ENST00000522013 MFRPQ9BY79 579 aa8.67□□□□□ -1.02
CTNNA1-232ENST00000522013 ATP10AO60312 1499 aa8.66□□□□□ -1.02
CTNNA1-232ENST00000522013 GABBR2O75899 941 aa8.66□□□□□ -1.02
CTNNA1-232ENST00000522013 CD44P16070 742 aaKnown RBP8.66□□□□□ -1.02
CTNNA1-232ENST00000522013 KCNV2Q8TDN2 545 aa8.66□□□□□ -1.02
CTNNA1-232ENST00000522013 PSEN1P49768 467 aa8.65□□□□□ -1.02
CTNNA1-232ENST00000522013 NCKAP5LQ9HCH0 1330 aa8.64□□□□□ -1.03
CTNNA1-232ENST00000522013 P3H3Q8IVL6 736 aa8.64□□□□□ -1.03
CTNNA1-232ENST00000522013 ESF1Q9H501 851 aaKnown RBP8.64□□□□□ -1.03
CTNNA1-232ENST00000522013 TOM1O60784 492 aa8.63□□□□□ -1.03
CTNNA1-232ENST00000522013 ZNF579Q8NAF0 562 aaKnown RBP8.63□□□□□ -1.03
CTNNA1-232ENST00000522013 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.63□□□□□ -1.03
CTNNA1-232ENST00000522013 MYT1LQ9UL68 1186 aa8.62□□□□□ -1.03
CTNNA1-232ENST00000522013 SCAPERQ9BY12 1400 aa8.62□□□□□ -1.03
CTNNA1-232ENST00000522013 TRAPPC8Q9Y2L5 1435 aa8.62□□□□□ -1.03
CTNNA1-232ENST00000522013 PPP1R37O75864 691 aa8.61□□□□□ -1.03
CTNNA1-232ENST00000522013 IFNL1Q8IU54 200 aa8.61□□□□□ -1.03
CTNNA1-232ENST00000522013 ZNF142P52746 1687 aaPredicted RBP8.61□□□□□ -1.03
CTNNA1-232ENST00000522013 MYO5CQ9NQX4 1742 aa8.6□□□□□ -1.03
CTNNA1-232ENST00000522013 MYO3AQ8NEV4 1616 aa8.6□□□□□ -1.03
CTNNA1-232ENST00000522013 POLR1AO95602 1720 aaPredicted RBP8.6□□□□□ -1.03
CTNNA1-232ENST00000522013 DIP2CQ9Y2E4 1556 aa8.58□□□□□ -1.04
CTNNA1-232ENST00000522013 EFCAB3Q8N7B9 438 aa8.58□□□□□ -1.04
CTNNA1-232ENST00000522013 FBXO22Q8NEZ5 403 aa8.58□□□□□ -1.04
CTNNA1-232ENST00000522013 ABCA6Q8N139 1617 aa8.58□□□□□ -1.04
CTNNA1-232ENST00000522013 MROH2AA6NES4 1674 aa8.57□□□□□ -1.04
CTNNA1-232ENST00000522013 MAP3K13O43283 966 aa8.57□□□□□ -1.04
CTNNA1-232ENST00000522013 KIF12Q96FN5 646 aa8.57□□□□□ -1.04
CTNNA1-232ENST00000522013 WDR70Q9NW82 654 aa8.57□□□□□ -1.04
CTNNA1-232ENST00000522013 RGS17Q9UGC6 210 aaPredicted RBP8.57□□□□□ -1.04
CTNNA1-232ENST00000522013 CPS1P31327 1500 aa8.57□□□□□ -1.04
CTNNA1-232ENST00000522013 NUP153P49790 1475 aaKnown RBP8.57□□□□□ -1.04
CTNNA1-232ENST00000522013 PLEKHD1A6NEE1 506 aa8.56□□□□□ -1.04
CTNNA1-232ENST00000522013 POTEIP0CG38 1075 aa8.56□□□□□ -1.04
CTNNA1-232ENST00000522013 PLA2R1Q13018 1463 aa8.56□□□□□ -1.04
CTNNA1-232ENST00000522013 CEP170BQ9Y4F5 1589 aaPredicted RBP8.56□□□□□ -1.04
CTNNA1-232ENST00000522013 PTPRKQ15262 1439 aa8.55□□□□□ -1.04
CTNNA1-232ENST00000522013 CABP2Q9NPB3 220 aa8.55□□□□□ -1.04
CTNNA1-232ENST00000522013 ZRANB1Q9UGI0 708 aa8.55□□□□□ -1.04
CTNNA1-232ENST00000522013 PHF8Q9UPP1 1060 aa8.55□□□□□ -1.04
CTNNA1-232ENST00000522013 ZNF518AQ6AHZ1 1483 aa8.55□□□□□ -1.04
CTNNA1-232ENST00000522013 CLTCQ00610 1675 aaKnown RBP8.54□□□□□ -1.04
CTNNA1-232ENST00000522013 SAMD9Q5K651 1589 aa8.54□□□□□ -1.04
CTNNA1-232ENST00000522013 REREQ9P2R6 1566 aa8.54□□□□□ -1.04
CTNNA1-232ENST00000522013 TCOF1Q13428 1488 aaKnown RBP8.54□□□□□ -1.04
CTNNA1-232ENST00000522013 ALKQ9UM73 1620 aa8.54□□□□□ -1.04
CTNNA1-232ENST00000522013 AGLP35573 1532 aa8.54□□□□□ -1.04
CTNNA1-232ENST00000522013 KDM5CP41229 1560 aa8.53□□□□□ -1.04
CTNNA1-232ENST00000522013 LMOD2Q6P5Q4 547 aa8.53□□□□□ -1.04
CTNNA1-232ENST00000522013 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.53□□□□□ -1.04
CTNNA1-232ENST00000522013 NPATQ14207 1427 aa8.53□□□□□ -1.04
CTNNA1-232ENST00000522013 CNTLNQ9NXG0 1405 aa8.53□□□□□ -1.04
CTNNA1-232ENST00000522013 POTEAQ6S8J7 498 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms