RNA–Protein interactions for RNA: ENST00000521986.5

PTK2-238, Transcript of protein tyrosine kinase 2, human

TSL 2

Gene PTK2, Length 2,393 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-238	ENST00000521986	RTL5	Q5HYW3	569 aa	Predicted RBP	11.43	□□□□□ -0.58
PTK2-238	ENST00000521986	SHANK2	Q9UPX8	1470 aa		11.42	□□□□□ -0.58
PTK2-238	ENST00000521986	ABCC2	Q92887	1545 aa		11.42	□□□□□ -0.58
PTK2-238	ENST00000521986	KDM2A	Q9Y2K7	1162 aa		11.42	□□□□□ -0.58
PTK2-238	ENST00000521986	CARD11	Q9BXL7	1154 aa		11.41	□□□□□ -0.58
PTK2-238	ENST00000521986	ARHGEF12	Q9NZN5	1544 aa		11.41	□□□□□ -0.58
PTK2-238	ENST00000521986	PNISR	Q8TF01	805 aa	Known RBP	11.41	□□□□□ -0.58
PTK2-238	ENST00000521986	HNRNPM	P52272	730 aa	Known RBP eCLIP	11.4	□□□□□ -0.58	1e-6	■■■■■ 34.1
PTK2-238	ENST00000521986	CYB5RL	Q6IPT4	315 aa		11.4	□□□□□ -0.58
PTK2-238	ENST00000521986	KDM5D	Q9BY66	1539 aa		11.4	□□□□□ -0.58
PTK2-238	ENST00000521986	KIF15	Q9NS87	1388 aa		11.4	□□□□□ -0.58
PTK2-238	ENST00000521986	TMC1	Q8TDI8	760 aa		11.4	□□□□□ -0.58
PTK2-238	ENST00000521986	ST20-MTHFS	A0A0A6YYL1	179 aa		11.39	□□□□□ -0.59
PTK2-238	ENST00000521986	ARID4B	Q4LE39	1312 aa	Predicted RBP	11.39	□□□□□ -0.59
PTK2-238	ENST00000521986	DCAF11	Q8TEB1	546 aa		11.38	□□□□□ -0.59
PTK2-238	ENST00000521986	UHRF1BP1L	A0JNW5	1464 aa		11.37	□□□□□ -0.59
PTK2-238	ENST00000521986	TSPY4	P0CV99	314 aa		11.37	□□□□□ -0.59
PTK2-238	ENST00000521986	TSPY10	P0CW01	314 aa		11.37	□□□□□ -0.59
PTK2-238	ENST00000521986	ROCK2	O75116	1388 aa	Known RBP	11.37	□□□□□ -0.59
PTK2-238	ENST00000521986	NPM2	Q86SE8	214 aa	Known RBP	11.36	□□□□□ -0.59
PTK2-238	ENST00000521986		E9PCH4	1651 aa		11.36	□□□□□ -0.59
PTK2-238	ENST00000521986	SAMD9L	Q8IVG5	1584 aa		11.36	□□□□□ -0.59
PTK2-238	ENST00000521986	ARHGEF5	Q12774	1597 aa		11.36	□□□□□ -0.59
PTK2-238	ENST00000521986	FAM135A	Q9P2D6	1515 aa		11.35	□□□□□ -0.59
PTK2-238	ENST00000521986	NPM1	P06748	294 aa	Known RBP eCLIP	11.34	□□□□□ -0.59
PTK2-238	ENST00000521986	EXOC6	Q8TAG9	804 aa		11.34	□□□□□ -0.59
PTK2-238	ENST00000521986	LRPPRC	P42704	1394 aa	Known RBP	11.34	□□□□□ -0.59
PTK2-238	ENST00000521986	RRP1	P56182	461 aa	Known RBP	11.34	□□□□□ -0.59
PTK2-238	ENST00000521986	CDC42BPB	Q9Y5S2	1711 aa		11.34	□□□□□ -0.59
PTK2-238	ENST00000521986	CCDC141	Q6ZP82	1450 aa		11.33	□□□□□ -0.6
PTK2-238	ENST00000521986	ZCCHC11	Q5TAX3	1644 aa	Known RBP	11.33	□□□□□ -0.6
PTK2-238	ENST00000521986	TCERG1	O14776	1098 aa	Known RBP	11.33	□□□□□ -0.6
PTK2-238	ENST00000521986	PREX2	Q70Z35	1606 aa		11.33	□□□□□ -0.6
PTK2-238	ENST00000521986	MYBBP1A	Q9BQG0	1328 aa	Known RBP	11.32	□□□□□ -0.6
PTK2-238	ENST00000521986	TRPM1	Q7Z4N2	1603 aa		11.32	□□□□□ -0.6
PTK2-238	ENST00000521986	PDE4A	P27815	886 aa		11.32	□□□□□ -0.6
PTK2-238	ENST00000521986	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	11.32	□□□□□ -0.6
PTK2-238	ENST00000521986	PRAG1	Q86YV5	1406 aa		11.32	□□□□□ -0.6
PTK2-238	ENST00000521986	ANO8	Q9HCE9	1232 aa	Predicted RBP	11.32	□□□□□ -0.6
PTK2-238	ENST00000521986	LAS1L	Q9Y4W2	734 aa	Known RBP	11.32	□□□□□ -0.6
PTK2-238	ENST00000521986	BRD4	O60885	1362 aa	Predicted RBP	11.32	□□□□□ -0.6
PTK2-238	ENST00000521986	NBPF1	Q3BBV0	1214 aa		11.31	□□□□□ -0.6
PTK2-238	ENST00000521986	IL27	Q8NEV9	243 aa		11.31	□□□□□ -0.6
PTK2-238	ENST00000521986	SALL2	Q9Y467	1007 aa	Predicted RBP	11.31	□□□□□ -0.6
PTK2-238	ENST00000521986	SYCP2	Q9BX26	1530 aa		11.31	□□□□□ -0.6
PTK2-238	ENST00000521986	NEFM	P07197	916 aa		11.31	□□□□□ -0.6
PTK2-238	ENST00000521986	RGL3	Q3MIN7	710 aa		11.31	□□□□□ -0.6
PTK2-238	ENST00000521986	RCAN3	Q9UKA8	241 aa		11.31	□□□□□ -0.6
PTK2-238	ENST00000521986	PLA2R1	Q13018	1463 aa		11.3	□□□□□ -0.6
PTK2-238	ENST00000521986	ASXL2	Q76L83	1435 aa		11.3	□□□□□ -0.6
PTK2-238	ENST00000521986	BACH2	Q9BYV9	841 aa		11.3	□□□□□ -0.6
PTK2-238	ENST00000521986	CCDC144A	A2RUR9	1427 aa		11.3	□□□□□ -0.6
PTK2-238	ENST00000521986	RALBP1	Q15311	655 aa		11.3	□□□□□ -0.6
PTK2-238	ENST00000521986	TTC37	Q6PGP7	1564 aa		11.29	□□□□□ -0.6
PTK2-238	ENST00000521986	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	11.29	□□□□□ -0.6	3e-7	■■■■□ 25.2
PTK2-238	ENST00000521986	A2M	P01023	1474 aa		11.29	□□□□□ -0.6
PTK2-238	ENST00000521986	PRKCSH	P14314	528 aa	Predicted RBP	11.28	□□□□□ -0.6
PTK2-238	ENST00000521986	USP35	Q9P2H5	1018 aa		11.28	□□□□□ -0.6
PTK2-238	ENST00000521986	UNC13B	O14795	1591 aa		11.28	□□□□□ -0.6
PTK2-238	ENST00000521986	WDR7	Q9Y4E6	1490 aa		11.28	□□□□□ -0.6
PTK2-238	ENST00000521986	KTN1	Q86UP2	1357 aa	Known RBP	11.28	□□□□□ -0.6
PTK2-238	ENST00000521986	PARD3	Q8TEW0	1356 aa		11.28	□□□□□ -0.6
PTK2-238	ENST00000521986	DISP3	Q9P2K9	1392 aa		11.27	□□□□□ -0.61
PTK2-238	ENST00000521986	MS4A1	P11836	297 aa		11.27	□□□□□ -0.61
PTK2-238	ENST00000521986	EFCAB2	Q5VUJ9	269 aa		11.27	□□□□□ -0.61
PTK2-238	ENST00000521986	RTN4	Q9NQC3	1192 aa	Known RBP	11.27	□□□□□ -0.61
PTK2-238	ENST00000521986	ARHGAP5	Q13017	1502 aa		11.27	□□□□□ -0.61
PTK2-238	ENST00000521986	PLCH2	O75038	1416 aa		11.26	□□□□□ -0.61
PTK2-238	ENST00000521986	MYO5C	Q9NQX4	1742 aa		11.26	□□□□□ -0.61
PTK2-238	ENST00000521986	PLEKHH2	Q8IVE3	1493 aa		11.25	□□□□□ -0.61
PTK2-238	ENST00000521986	COL17A1	Q9UMD9	1497 aa	Predicted RBP	11.25	□□□□□ -0.61
PTK2-238	ENST00000521986	PER1	O15534	1290 aa	Predicted RBP	11.25	□□□□□ -0.61
PTK2-238	ENST00000521986	NLRP13	Q86W25	1043 aa		11.25	□□□□□ -0.61
PTK2-238	ENST00000521986	AFAP1	Q8N556	730 aa		11.25	□□□□□ -0.61
PTK2-238	ENST00000521986	MAST1	Q9Y2H9	1570 aa		11.25	□□□□□ -0.61
PTK2-238	ENST00000521986	PPM1G	O15355	546 aa	Predicted RBP	11.25	□□□□□ -0.61
PTK2-238	ENST00000521986	PDE3B	Q13370	1112 aa		11.25	□□□□□ -0.61
PTK2-238	ENST00000521986	GPRASP1	Q5JY77	1395 aa		11.25	□□□□□ -0.61
PTK2-238	ENST00000521986	PRDM15	P57071	1507 aa	Predicted RBP	11.24	□□□□□ -0.61
PTK2-238	ENST00000521986	CC2D1B	Q5T0F9	858 aa	Known RBP	11.24	□□□□□ -0.61
PTK2-238	ENST00000521986	CDCA7L	Q96GN5	454 aa		11.24	□□□□□ -0.61
PTK2-238	ENST00000521986	TESK2	Q96S53	571 aa		11.24	□□□□□ -0.61
PTK2-238	ENST00000521986	IQGAP3	Q86VI3	1631 aa		11.23	□□□□□ -0.61
PTK2-238	ENST00000521986	PLIN1	O60240	522 aa		11.23	□□□□□ -0.61
PTK2-238	ENST00000521986	RIMBP3C	A6NJZ7	1639 aa		11.23	□□□□□ -0.61
PTK2-238	ENST00000521986	RIMBP3B	A6NNM3	1639 aa		11.23	□□□□□ -0.61
PTK2-238	ENST00000521986	RIMBP3	Q9UFD9	1639 aa		11.23	□□□□□ -0.61
PTK2-238	ENST00000521986	LAMC1	P11047	1609 aa		11.22	□□□□□ -0.61
PTK2-238	ENST00000521986	PLXNC1	O60486	1568 aa		11.22	□□□□□ -0.61
PTK2-238	ENST00000521986	ERBIN	Q96RT1	1412 aa		11.22	□□□□□ -0.61
PTK2-238	ENST00000521986	RSPH4A	Q5TD94	716 aa		11.22	□□□□□ -0.61
PTK2-238	ENST00000521986	SKAP1	Q86WV1	359 aa		11.22	□□□□□ -0.61
PTK2-238	ENST00000521986	WASHC2C	Q9Y4E1	1318 aa		11.22	□□□□□ -0.61
PTK2-238	ENST00000521986	TRAPPC8	Q9Y2L5	1435 aa		11.21	□□□□□ -0.61
PTK2-238	ENST00000521986	PANK3	Q9H999	370 aa		11.21	□□□□□ -0.62
PTK2-238	ENST00000521986	DDRGK1	Q96HY6	314 aa		11.19	□□□□□ -0.62
PTK2-238	ENST00000521986	CRBN	Q96SW2	442 aa		11.19	□□□□□ -0.62
PTK2-238	ENST00000521986	BLM	P54132	1417 aa	Predicted RBP	11.19	□□□□□ -0.62
PTK2-238	ENST00000521986	EIF2AK4	Q9P2K8	1649 aa	Known RBP	11.19	□□□□□ -0.62
PTK2-238	ENST00000521986	DUOX2	Q9NRD8	1548 aa		11.19	□□□□□ -0.62

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