RNA–Protein interactions for RNA: ENST00000521798.1

SPIDR-215, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 647 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-215ENST00000521798 HMGXB3Q12766 1538 aa12.21□□□□□ -0.45
SPIDR-215ENST00000521798 OXER1Q8TDS5 423 aa12.21□□□□□ -0.45
SPIDR-215ENST00000521798 UPF1Q92900 1129 aaKnown RBP eCLIP12.21□□□□□ -0.45
SPIDR-215ENST00000521798 PRIM1P49642 420 aaKnown RBP12.2□□□□□ -0.46
SPIDR-215ENST00000521798 REPIN1Q9BWE0 567 aaKnown RBP12.2□□□□□ -0.46
SPIDR-215ENST00000521798 BOLA1Q9Y3E2 137 aa12.19□□□□□ -0.46
SPIDR-215ENST00000521798 TMUB1Q9BVT8 246 aa12.18□□□□□ -0.46
SPIDR-215ENST00000521798 BAZ1BQ9UIG0 1483 aaKnown RBP12.18□□□□□ -0.46
SPIDR-215ENST00000521798 RSF1Q96T23 1441 aaPredicted RBP12.17□□□□□ -0.46
SPIDR-215ENST00000521798 CLCN1P35523 988 aa12.15□□□□□ -0.46
SPIDR-215ENST00000521798 PROSER2Q86WR7 435 aaPredicted RBP12.15□□□□□ -0.46
SPIDR-215ENST00000521798 CCDC9Q9Y3X0 531 aaKnown RBP12.15□□□□□ -0.46
SPIDR-215ENST00000521798 WIZO95785 1651 aa12.14□□□□□ -0.47
SPIDR-215ENST00000521798 TBC1D12O60347 775 aa12.14□□□□□ -0.47
SPIDR-215ENST00000521798 C19orf67A6NJJ6 358 aa12.13□□□□□ -0.47
SPIDR-215ENST00000521798 G3V3G9 751 aa12.13□□□□□ -0.47
SPIDR-215ENST00000521798 NECTIN2Q92692 538 aa12.13□□□□□ -0.47
SPIDR-215ENST00000521798 EVI5O60447 810 aa12.12□□□□□ -0.47
SPIDR-215ENST00000521798 IRX5P78411 483 aaPredicted RBP12.12□□□□□ -0.47
SPIDR-215ENST00000521798 SKIV2LQ15477 1246 aaKnown RBP12.12□□□□□ -0.47
SPIDR-215ENST00000521798 GPCPD1Q9NPB8 672 aa12.12□□□□□ -0.47
SPIDR-215ENST00000521798 FNBP4Q8N3X1 1017 aaPredicted RBP12.11□□□□□ -0.47
SPIDR-215ENST00000521798 OCEL1Q9H607 264 aa12.11□□□□□ -0.47
SPIDR-215ENST00000521798 MDM2Q00987 491 aaPredicted RBP12.08□□□□□ -0.48
SPIDR-215ENST00000521798 SERPINA10Q9UK55 444 aa12.08□□□□□ -0.48
SPIDR-215ENST00000521798 ZNF777Q9ULD5 760 aaPredicted RBP12.08□□□□□ -0.48
SPIDR-215ENST00000521798 GALR2O43603 387 aaPredicted RBP12.06□□□□□ -0.48
SPIDR-215ENST00000521798 RAD21O60216 631 aa12.06□□□□□ -0.48
SPIDR-215ENST00000521798 SSTR3P32745 418 aaPredicted RBP12.06□□□□□ -0.48
SPIDR-215ENST00000521798 IER5LQ5T953 404 aa12.06□□□□□ -0.48
SPIDR-215ENST00000521798 TMEM92Q6UXU6 159 aa12.06□□□□□ -0.48
SPIDR-215ENST00000521798 CCDC97Q96F63 343 aaPredicted RBP12.06□□□□□ -0.48
SPIDR-215ENST00000521798 POM121Q96HA1 1249 aa12.06□□□□□ -0.48
SPIDR-215ENST00000521798 TRAIPQ9BWF2 469 aa12.06□□□□□ -0.48
SPIDR-215ENST00000521798 CDHR5Q9HBB8 845 aa12.06□□□□□ -0.48
SPIDR-215ENST00000521798 NPDC1Q9NQX5 325 aaPredicted RBP12.06□□□□□ -0.48
SPIDR-215ENST00000521798 EN1Q05925 392 aaPredicted RBP12.04□□□□□ -0.48
SPIDR-215ENST00000521798 PHOX2BQ99453 314 aa12.04□□□□□ -0.48
SPIDR-215ENST00000521798 BEGAINQ9BUH8 593 aa12.04□□□□□ -0.48
SPIDR-215ENST00000521798 ATN1P54259 1190 aaPredicted RBP12.03□□□□□ -0.48
SPIDR-215ENST00000521798 PROCA1Q8NCQ7 364 aaPredicted RBP12.03□□□□□ -0.48
SPIDR-215ENST00000521798 TOP2AP11388 1531 aaKnown RBP12.02□□□□□ -0.48
SPIDR-215ENST00000521798 SPDYE5A6NIY4 337 aa12.02□□□□□ -0.49
SPIDR-215ENST00000521798 PTCD2Q8WV60 388 aaKnown RBP12.01□□□□□ -0.49
SPIDR-215ENST00000521798 L3MBTL3Q96JM7 780 aaPredicted RBP12.01□□□□□ -0.49
SPIDR-215ENST00000521798 EPAS1Q99814 870 aa12.01□□□□□ -0.49
SPIDR-215ENST00000521798 ANO8Q9HCE9 1232 aaPredicted RBP12.01□□□□□ -0.49
SPIDR-215ENST00000521798 FAM217BQ9NTX9 383 aaPredicted RBP12.01□□□□□ -0.49
SPIDR-215ENST00000521798 GNL3Q9BVP2 549 aaKnown RBP eCLIP12□□□□□ -0.49
SPIDR-215ENST00000521798 PHF14O94880 888 aa11.99□□□□□ -0.49
SPIDR-215ENST00000521798 KCTD17Q8N5Z5 321 aa11.99□□□□□ -0.49
SPIDR-215ENST00000521798 COG6Q9Y2V7 657 aa11.99□□□□□ -0.49
SPIDR-215ENST00000521798 NESP48681 1621 aa11.99□□□□□ -0.49
SPIDR-215ENST00000521798 MAP3K7O43318 606 aa11.98□□□□□ -0.49
SPIDR-215ENST00000521798 PLSCR2Q9NRY7 297 aa11.98□□□□□ -0.49
SPIDR-215ENST00000521798 POLR3EQ9NVU0 708 aa11.98□□□□□ -0.49
SPIDR-215ENST00000521798 ATP1B4Q9UN42 357 aaPredicted RBP11.98□□□□□ -0.49
SPIDR-215ENST00000521798 PLCG2P16885 1265 aa11.97□□□□□ -0.49
SPIDR-215ENST00000521798 MYSM1Q5VVJ2 828 aa11.97□□□□□ -0.49
SPIDR-215ENST00000521798 ATMINO43313 823 aaPredicted RBP11.96□□□□□ -0.49
SPIDR-215ENST00000521798 BANK1Q8NDB2 785 aa11.96□□□□□ -0.49
SPIDR-215ENST00000521798 CLK2P49760 499 aaKnown RBP11.95□□□□□ -0.5
SPIDR-215ENST00000521798 CLCN6P51797 869 aa11.94□□□□□ -0.5
SPIDR-215ENST00000521798 ASTLQ6HA08 431 aaPredicted RBP11.94□□□□□ -0.5
SPIDR-215ENST00000521798 METTL3Q86U44 580 aaKnown RBP11.94□□□□□ -0.5
SPIDR-215ENST00000521798 CADPSQ9ULU8 1353 aa11.93□□□□□ -0.5
SPIDR-215ENST00000521798 LAMC3Q9Y6N6 1575 aa11.93□□□□□ -0.5
SPIDR-215ENST00000521798 OATP04181 439 aa11.93□□□□□ -0.5
SPIDR-215ENST00000521798 SLC34A2O95436 690 aa11.92□□□□□ -0.5
SPIDR-215ENST00000521798 TSR1Q2NL82 804 aaKnown RBP11.92□□□□□ -0.5
SPIDR-215ENST00000521798 RFC5P40937 340 aa11.91□□□□□ -0.5
SPIDR-215ENST00000521798 RBM33Q96EV2 1170 aaKnown RBP11.91□□□□□ -0.5
SPIDR-215ENST00000521798 ERCC6Q03468 1493 aa11.9□□□□□ -0.5
SPIDR-215ENST00000521798 SLAIN1Q8ND83 568 aa11.9□□□□□ -0.5
SPIDR-215ENST00000521798 SNRKQ9NRH2 765 aa11.9□□□□□ -0.5
SPIDR-215ENST00000521798 ZNF330Q9Y3S2 320 aaPredicted RBP11.9□□□□□ -0.5
SPIDR-215ENST00000521798 PCDHGA10Q9Y5H3 936 aa11.9□□□□□ -0.5
SPIDR-215ENST00000521798 DIXDC1Q155Q3 683 aa11.89□□□□□ -0.51
SPIDR-215ENST00000521798 TYW1BQ6NUM6 668 aa11.89□□□□□ -0.51
SPIDR-215ENST00000521798 RETREG2Q8NC44 543 aa11.89□□□□□ -0.51
SPIDR-215ENST00000521798 PXYLP1Q8TE99 480 aa11.89□□□□□ -0.51
SPIDR-215ENST00000521798 CCDC88BA6NC98 1476 aa11.89□□□□□ -0.51
SPIDR-215ENST00000521798 FAM161AQ3B820 660 aa11.88□□□□□ -0.51
SPIDR-215ENST00000521798 NLRP7Q8WX94 980 aa11.88□□□□□ -0.51
SPIDR-215ENST00000521798 TBC1D2Q9BYX2 928 aa11.88□□□□□ -0.51
SPIDR-215ENST00000521798 TMEM259Q4ZIN3 620 aa11.87□□□□□ -0.51
SPIDR-215ENST00000521798 AEBP1Q8IUX7 1158 aa11.87□□□□□ -0.51
SPIDR-215ENST00000521798 ADGRG1Q9Y653 693 aa11.87□□□□□ -0.51
SPIDR-215ENST00000521798 CFTRP13569 1480 aa11.87□□□□□ -0.51
SPIDR-215ENST00000521798 PDS5BQ9NTI5 1447 aa11.86□□□□□ -0.51
SPIDR-215ENST00000521798 PPP2R2DQ66LE6 453 aa11.86□□□□□ -0.51
SPIDR-215ENST00000521798 FBXW7Q969H0 707 aa11.86□□□□□ -0.51
SPIDR-215ENST00000521798 CERKQ8TCT0 537 aa11.85□□□□□ -0.51
SPIDR-215ENST00000521798 FBXO31Q5XUX0 539 aaPredicted RBP11.84□□□□□ -0.51
SPIDR-215ENST00000521798 PADI6Q6TGC4 694 aa11.84□□□□□ -0.51
SPIDR-215ENST00000521798 PPP1R15AO75807 674 aaPredicted RBP11.82□□□□□ -0.52
SPIDR-215ENST00000521798 MTMR14Q8NCE2 650 aa11.82□□□□□ -0.52
SPIDR-215ENST00000521798 RBM27Q9P2N5 1060 aaKnown RBP11.82□□□□□ -0.52
SPIDR-215ENST00000521798 LIMD1Q9UGP4 676 aa11.82□□□□□ -0.52
SPIDR-215ENST00000521798 KIF21AQ7Z4S6 1674 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms