RNA–Protein interactions for RNA: ENST00000519674.1

TRPS1-209, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 3,116 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-209ENST00000519674 SHANK2Q9UPX8 1470 aa11.31□□□□□ -0.6
TRPS1-209ENST00000519674 NBPF8Q3BBV2 869 aa11.31□□□□□ -0.6
TRPS1-209ENST00000519674 PKD2Q13563 968 aa11.31□□□□□ -0.6
TRPS1-209ENST00000519674 CDC42BPBQ9Y5S2 1711 aa11.31□□□□□ -0.6
TRPS1-209ENST00000519674 KIAA1107Q9UPP5 1409 aa11.3□□□□□ -0.6
TRPS1-209ENST00000519674 HNRNPUQ00839 825 aaKnown RBP eCLIP11.3□□□□□ -0.6
TRPS1-209ENST00000519674 LAS1LQ9Y4W2 734 aaKnown RBP11.3□□□□□ -0.6
TRPS1-209ENST00000519674 PREX2Q70Z35 1606 aa11.29□□□□□ -0.6
TRPS1-209ENST00000519674 SAMD9LQ8IVG5 1584 aa11.29□□□□□ -0.6
TRPS1-209ENST00000519674 PDE4CQ08493 712 aa11.29□□□□□ -0.6
TRPS1-209ENST00000519674 HSP90AA2PQ14568 343 aaPredicted RBP11.29□□□□□ -0.6
TRPS1-209ENST00000519674 NUP155O75694 1391 aa11.29□□□□□ -0.6
TRPS1-209ENST00000519674 MBD5Q9P267 1494 aa11.29□□□□□ -0.6
TRPS1-209ENST00000519674 KIF15Q9NS87 1388 aa11.29□□□□□ -0.6
TRPS1-209ENST00000519674 TTC37Q6PGP7 1564 aa11.28□□□□□ -0.6
TRPS1-209ENST00000519674 A0A0U1RQG5 324 aaPredicted RBP11.28□□□□□ -0.6
TRPS1-209ENST00000519674 ARHGEF5Q12774 1597 aa11.28□□□□□ -0.6
TRPS1-209ENST00000519674 ABCC2Q92887 1545 aa11.27□□□□□ -0.61
TRPS1-209ENST00000519674 FRAT1Q92837 279 aaPredicted RBP11.27□□□□□ -0.61
TRPS1-209ENST00000519674 CCDC141Q6ZP82 1450 aa11.27□□□□□ -0.61
TRPS1-209ENST00000519674 ZNF326Q5BKZ1 582 aaKnown RBP11.26□□□□□ -0.61
TRPS1-209ENST00000519674 ARHGAP5Q13017 1502 aa11.26□□□□□ -0.61
TRPS1-209ENST00000519674 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.26□□□□□ -0.61
TRPS1-209ENST00000519674 SYCP2Q9BX26 1530 aa11.26□□□□□ -0.61
TRPS1-209ENST00000519674 DCAF11Q8TEB1 546 aa11.24□□□□□ -0.61
TRPS1-209ENST00000519674 MYO5CQ9NQX4 1742 aa11.23□□□□□ -0.61
TRPS1-209ENST00000519674 CCDC7Q96M83 1385 aa11.23□□□□□ -0.61
TRPS1-209ENST00000519674 CLASP1Q7Z460 1538 aa11.23□□□□□ -0.61
TRPS1-209ENST00000519674 CNTLNQ9NXG0 1405 aa11.23□□□□□ -0.61
TRPS1-209ENST00000519674 KDM5DQ9BY66 1539 aa11.22□□□□□ -0.61
TRPS1-209ENST00000519674 SPATA31E1Q6ZUB1 1445 aa11.22□□□□□ -0.61
TRPS1-209ENST00000519674 RSPH4AQ5TD94 716 aa11.22□□□□□ -0.61
TRPS1-209ENST00000519674 PDIA4P13667 645 aaKnown RBP11.21□□□□□ -0.62
TRPS1-209ENST00000519674 ZCCHC11Q5TAX3 1644 aaKnown RBP11.21□□□□□ -0.62
TRPS1-209ENST00000519674 NFKBIBQ15653 356 aa11.2□□□□□ -0.62
TRPS1-209ENST00000519674 RRAGDQ9NQL2 400 aaPredicted RBP11.2□□□□□ -0.62
TRPS1-209ENST00000519674 KIF7Q2M1P5 1343 aa11.2□□□□□ -0.62
TRPS1-209ENST00000519674 FAM135AQ9P2D6 1515 aa11.2□□□□□ -0.62
TRPS1-209ENST00000519674 HSP90AA1P07900 732 aaKnown RBP11.19□□□□□ -0.62
TRPS1-209ENST00000519674 POLR1AO95602 1720 aaPredicted RBP11.19□□□□□ -0.62
TRPS1-209ENST00000519674 USP47Q96K76 1375 aa11.19□□□□□ -0.62
TRPS1-209ENST00000519674 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.18□□□□□ -0.62
TRPS1-209ENST00000519674 PRDM4Q9UKN5 801 aa11.18□□□□□ -0.62
TRPS1-209ENST00000519674 KDM2AQ9Y2K7 1162 aa11.18□□□□□ -0.62
TRPS1-209ENST00000519674 MAST1Q9Y2H9 1570 aa11.17□□□□□ -0.62
TRPS1-209ENST00000519674 ARHGEF12Q9NZN5 1544 aa11.17□□□□□ -0.62
TRPS1-209ENST00000519674 CENPJQ9HC77 1338 aaPredicted RBP11.17□□□□□ -0.62
TRPS1-209ENST00000519674 POLR3GLQ9BT43 218 aa11.16□□□□□ -0.62
TRPS1-209ENST00000519674 PLEKHH2Q8IVE3 1493 aa11.16□□□□□ -0.62
TRPS1-209ENST00000519674 UHRF1BP1LA0JNW5 1464 aa11.16□□□□□ -0.62
TRPS1-209ENST00000519674 PLCH2O75038 1416 aa11.16□□□□□ -0.62
TRPS1-209ENST00000519674 PRKRIP1Q9H875 184 aaPredicted RBP11.15□□□□□ -0.62
TRPS1-209ENST00000519674 RNF123Q5XPI4 1314 aa11.15□□□□□ -0.62
TRPS1-209ENST00000519674 ZBED9Q6R2W3 1325 aa11.15□□□□□ -0.62
TRPS1-209ENST00000519674 KDM5CP41229 1560 aa11.15□□□□□ -0.62
TRPS1-209ENST00000519674 BCORL1Q5H9F3 1711 aa11.15□□□□□ -0.62
TRPS1-209ENST00000519674 CALD1Q05682 793 aaKnown RBP11.15□□□□□ -0.62
TRPS1-209ENST00000519674 CCDC184Q52MB2 194 aa11.15□□□□□ -0.62
TRPS1-209ENST00000519674 PLXNC1O60486 1568 aa11.15□□□□□ -0.62
TRPS1-209ENST00000519674 UHRF1BP1Q6BDS2 1440 aa11.15□□□□□ -0.62
TRPS1-209ENST00000519674 UNC13BO14795 1591 aa11.14□□□□□ -0.63
TRPS1-209ENST00000519674 EFCAB2Q5VUJ9 269 aa11.14□□□□□ -0.63
TRPS1-209ENST00000519674 RALGAPBQ86X10 1494 aa11.14□□□□□ -0.63
TRPS1-209ENST00000519674 NPM2Q86SE8 214 aaKnown RBP11.14□□□□□ -0.63
TRPS1-209ENST00000519674 CARD11Q9BXL7 1154 aa11.14□□□□□ -0.63
TRPS1-209ENST00000519674 BCL11BQ9C0K0 894 aaPredicted RBP11.13□□□□□ -0.63
TRPS1-209ENST00000519674 CCDC144AA2RUR9 1427 aa11.13□□□□□ -0.63
TRPS1-209ENST00000519674 CNGB1Q14028 1251 aaPredicted RBP11.13□□□□□ -0.63
TRPS1-209ENST00000519674 ABCC1P33527 1531 aa11.12□□□□□ -0.63
TRPS1-209ENST00000519674 TRAPPC8Q9Y2L5 1435 aa11.12□□□□□ -0.63
TRPS1-209ENST00000519674 RGL3Q3MIN7 710 aa11.12□□□□□ -0.63
TRPS1-209ENST00000519674 BACH2Q9BYV9 841 aa11.12□□□□□ -0.63
TRPS1-209ENST00000519674 DUOX2Q9NRD8 1548 aa11.12□□□□□ -0.63
TRPS1-209ENST00000519674 NAP1L5Q96NT1 182 aaPredicted RBP11.11□□□□□ -0.63
TRPS1-209ENST00000519674 TCERG1O14776 1098 aaKnown RBP11.11□□□□□ -0.63
TRPS1-209ENST00000519674 CLCN1P35523 988 aa11.11□□□□□ -0.63
TRPS1-209ENST00000519674 DDRGK1Q96HY6 314 aa11.11□□□□□ -0.63
TRPS1-209ENST00000519674 MRS2Q9HD23 443 aa11.11□□□□□ -0.63
TRPS1-209ENST00000519674 IQGAP3Q86VI3 1631 aa11.11□□□□□ -0.63
TRPS1-209ENST00000519674 PDE4AP27815 886 aa11.11□□□□□ -0.63
TRPS1-209ENST00000519674 PLA2R1Q13018 1463 aa11.1□□□□□ -0.63
TRPS1-209ENST00000519674 FAM9BQ8IZU0 186 aa11.1□□□□□ -0.63
TRPS1-209ENST00000519674 PNNQ9H307 717 aaKnown RBP11.1□□□□□ -0.63
TRPS1-209ENST00000519674 ROCK2O75116 1388 aaKnown RBP11.1□□□□□ -0.63
TRPS1-209ENST00000519674 ERBINQ96RT1 1412 aa11.09□□□□□ -0.63
TRPS1-209ENST00000519674 AFAP1Q8N556 730 aa11.09□□□□□ -0.63
TRPS1-209ENST00000519674 SMG6Q86US8 1419 aaKnown RBP11.09□□□□□ -0.63
TRPS1-209ENST00000519674 ST20-MTHFSA0A0A6YYL1 179 aa11.09□□□□□ -0.63
TRPS1-209ENST00000519674 SENP3-EIF4A1A0A087X0R7 540 aa11.08□□□□□ -0.64
TRPS1-209ENST00000519674 MS4A1P11836 297 aa11.08□□□□□ -0.64
TRPS1-209ENST00000519674 WDR7Q9Y4E6 1490 aa11.08□□□□□ -0.64
TRPS1-209ENST00000519674 DHX29Q7Z478 1369 aaKnown RBP11.08□□□□□ -0.64
TRPS1-209ENST00000519674 PDCL3Q9H2J4 239 aa11.08□□□□□ -0.64
TRPS1-209ENST00000519674 SPAG9O60271 1321 aaKnown RBP11.08□□□□□ -0.64
TRPS1-209ENST00000519674 MAGI2Q86UL8 1455 aa11.07□□□□□ -0.64
TRPS1-209ENST00000519674 PRAG1Q86YV5 1406 aa11.07□□□□□ -0.64
TRPS1-209ENST00000519674 A2MP01023 1474 aa11.06□□□□□ -0.64
TRPS1-209ENST00000519674 TRPM1Q7Z4N2 1603 aa11.06□□□□□ -0.64
TRPS1-209ENST00000519674 ARID4BQ4LE39 1312 aaPredicted RBP11.06□□□□□ -0.64
TRPS1-209ENST00000519674 ZFYVE16Q7Z3T8 1539 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms