RNA–Protein interactions for RNA: ENST00000519656.1

EFR3A-202, Transcript of EFR3 homolog A, humanhuman

TSL 1 (best) BASIC

Gene EFR3A, Length 5,247 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFR3A-202ENST00000519656 EVA1CP58658 441 aa4.2□□□□□ -1.74
EFR3A-202ENST00000519656 LRPPRCP42704 1394 aaKnown RBP4.2□□□□□ -1.74
EFR3A-202ENST00000519656 CUL7Q14999 1698 aa4.2□□□□□ -1.74
EFR3A-202ENST00000519656 NPATQ14207 1427 aa4.2□□□□□ -1.74
EFR3A-202ENST00000519656 NPM2Q86SE8 214 aaKnown RBP4.2□□□□□ -1.74
EFR3A-202ENST00000519656 ARHGAP5Q13017 1502 aa4.19□□□□□ -1.74
EFR3A-202ENST00000519656 USP21Q9UK80 565 aa4.19□□□□□ -1.74
EFR3A-202ENST00000519656 PLCH2O75038 1416 aa4.18□□□□□ -1.74
EFR3A-202ENST00000519656 CEP162Q5TB80 1403 aa4.18□□□□□ -1.74
EFR3A-202ENST00000519656 KLHL34Q8N239 644 aa4.18□□□□□ -1.74
EFR3A-202ENST00000519656 POLD1P28340 1107 aa4.18□□□□□ -1.74
EFR3A-202ENST00000519656 SPON1Q9HCB6 807 aa4.18□□□□□ -1.74
EFR3A-202ENST00000519656 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.18□□□□□ -1.74
EFR3A-202ENST00000519656 PRDM2Q13029 1718 aa4.18□□□□□ -1.74
EFR3A-202ENST00000519656 NPM3O75607 178 aaKnown RBP4.18□□□□□ -1.74
EFR3A-202ENST00000519656 CPS1P31327 1500 aa4.17□□□□□ -1.74
EFR3A-202ENST00000519656 PELP1Q8IZL8 1130 aaKnown RBP4.17□□□□□ -1.74
EFR3A-202ENST00000519656 GCC1Q96CN9 775 aa4.17□□□□□ -1.74
EFR3A-202ENST00000519656 BEGAINQ9BUH8 593 aa4.17□□□□□ -1.74
EFR3A-202ENST00000519656 NPHP4O75161 1426 aaPredicted RBP4.17□□□□□ -1.74
EFR3A-202ENST00000519656 SLC26A8Q96RN1 970 aa4.17□□□□□ -1.74
EFR3A-202ENST00000519656 CFAP74Q9C0B2 1584 aa4.17□□□□□ -1.74
EFR3A-202ENST00000519656 FAM50AQ14320 339 aaKnown RBP4.17□□□□□ -1.74
EFR3A-202ENST00000519656 TNS4Q8IZW8 715 aa4.17□□□□□ -1.74
EFR3A-202ENST00000519656 GPR162Q16538 588 aa4.17□□□□□ -1.74
EFR3A-202ENST00000519656 LRRC9Q6ZRR7 1453 aa4.16□□□□□ -1.74
EFR3A-202ENST00000519656 NPHP3Q7Z494 1330 aa4.16□□□□□ -1.74
EFR3A-202ENST00000519656 PLEKHG5O94827 1062 aa4.16□□□□□ -1.74
EFR3A-202ENST00000519656 POGKQ9P215 609 aa4.16□□□□□ -1.74
EFR3A-202ENST00000519656 TROQ12816 1431 aaPredicted RBP4.16□□□□□ -1.74
EFR3A-202ENST00000519656 UPF1Q92900 1129 aaKnown RBP eCLIP4.16□□□□□ -1.74
EFR3A-202ENST00000519656 CFAP44Q96MT7 982 aa4.16□□□□□ -1.74
EFR3A-202ENST00000519656 AFF2P51816 1311 aa4.16□□□□□ -1.74
EFR3A-202ENST00000519656 VGFO15240 615 aaPredicted RBP4.16□□□□□ -1.74
EFR3A-202ENST00000519656 UGGT2Q9NYU1 1516 aa4.16□□□□□ -1.74
EFR3A-202ENST00000519656 PBRM1Q86U86 1689 aa4.16□□□□□ -1.74
EFR3A-202ENST00000519656 FAM83GA6ND36 823 aa4.16□□□□□ -1.74
EFR3A-202ENST00000519656 CAPN15O75808 1086 aa4.16□□□□□ -1.74
EFR3A-202ENST00000519656 ATP10BO94823 1461 aa4.16□□□□□ -1.74
EFR3A-202ENST00000519656 RPRD2Q5VT52 1461 aaKnown RBP4.16□□□□□ -1.74
EFR3A-202ENST00000519656 FYCO1Q9BQS8 1478 aa4.16□□□□□ -1.74
EFR3A-202ENST00000519656 ABCA5Q8WWZ7 1642 aa4.15□□□□□ -1.74
EFR3A-202ENST00000519656 BCL11BQ9C0K0 894 aaPredicted RBP4.15□□□□□ -1.74
EFR3A-202ENST00000519656 STK32BQ9NY57 414 aa4.15□□□□□ -1.74
EFR3A-202ENST00000519656 SAMD1Q6SPF0 538 aaPredicted RBP4.15□□□□□ -1.75
EFR3A-202ENST00000519656 TBX22Q9Y458 520 aa4.15□□□□□ -1.75
EFR3A-202ENST00000519656 COL17A1Q9UMD9 1497 aaPredicted RBP4.14□□□□□ -1.75
EFR3A-202ENST00000519656 NCOA1Q15788 1441 aa4.14□□□□□ -1.75
EFR3A-202ENST00000519656 KIAA0556O60303 1618 aa4.14□□□□□ -1.75
EFR3A-202ENST00000519656 SHANK2Q9UPX8 1470 aa4.14□□□□□ -1.75
EFR3A-202ENST00000519656 MIA2Q96PC5 1412 aa4.14□□□□□ -1.75
EFR3A-202ENST00000519656 LTBP4Q8N2S1 1624 aa4.14□□□□□ -1.75
EFR3A-202ENST00000519656 CSB-PGBD3P0DP91 1061 aa4.14□□□□□ -1.75
EFR3A-202ENST00000519656 PLA2R1Q13018 1463 aa4.14□□□□□ -1.75
EFR3A-202ENST00000519656 FAM135BQ49AJ0 1406 aa4.14□□□□□ -1.75
EFR3A-202ENST00000519656 GRIN3BO60391 1043 aa4.13□□□□□ -1.75
EFR3A-202ENST00000519656 SLC4A1APQ9BWU0 796 aaKnown RBP4.13□□□□□ -1.75
EFR3A-202ENST00000519656 TMEM94Q12767 1356 aa4.13□□□□□ -1.75
EFR3A-202ENST00000519656 GPRASP1Q5JY77 1395 aa4.13□□□□□ -1.75
EFR3A-202ENST00000519656 NGDNQ8NEJ9 315 aaKnown RBP4.13□□□□□ -1.75
EFR3A-202ENST00000519656 ABCA8O94911 1581 aa4.13□□□□□ -1.75
EFR3A-202ENST00000519656 NLRP1Q9C000 1473 aa4.13□□□□□ -1.75
EFR3A-202ENST00000519656 PRDM11Q9NQV5 511 aa4.13□□□□□ -1.75
EFR3A-202ENST00000519656 DHX29Q7Z478 1369 aaKnown RBP4.12□□□□□ -1.75
EFR3A-202ENST00000519656 ANKRD30AQ9BXX3 1397 aa4.12□□□□□ -1.75
EFR3A-202ENST00000519656 KRT27Q7Z3Y8 459 aa4.12□□□□□ -1.75
EFR3A-202ENST00000519656 A2ML1A8K2U0 1454 aa4.12□□□□□ -1.75
EFR3A-202ENST00000519656 A2MP01023 1474 aa4.12□□□□□ -1.75
EFR3A-202ENST00000519656 ZBTB7CA1YPR0 619 aa4.12□□□□□ -1.75
EFR3A-202ENST00000519656 FAM196AQ6ZSG2 479 aa4.12□□□□□ -1.75
EFR3A-202ENST00000519656 WASHC2AQ641Q2 1341 aa4.12□□□□□ -1.75
EFR3A-202ENST00000519656 SHROOM2Q13796 1616 aa4.12□□□□□ -1.75
EFR3A-202ENST00000519656 ADCY10Q96PN6 1610 aa4.12□□□□□ -1.75
EFR3A-202ENST00000519656 ESCO1Q5FWF5 840 aa4.12□□□□□ -1.75
EFR3A-202ENST00000519656 POTEAQ6S8J7 498 aa4.12□□□□□ -1.75
EFR3A-202ENST00000519656 PAK3O75914 559 aaPredicted RBP4.12□□□□□ -1.75
EFR3A-202ENST00000519656 RUSC2Q8N2Y8 1516 aa4.12□□□□□ -1.75
EFR3A-202ENST00000519656 FBXO31Q5XUX0 539 aaPredicted RBP4.11□□□□□ -1.75
EFR3A-202ENST00000519656 ZNF219Q9P2Y4 722 aaPredicted RBP4.11□□□□□ -1.75
EFR3A-202ENST00000519656 FGD6Q6ZV73 1430 aa4.11□□□□□ -1.75
EFR3A-202ENST00000519656 APLP1P51693 650 aa4.1□□□□□ -1.75
EFR3A-202ENST00000519656 AGLP35573 1532 aa4.1□□□□□ -1.75
EFR3A-202ENST00000519656 AMOTL2Q9Y2J4 779 aa4.1□□□□□ -1.75
EFR3A-202ENST00000519656 KDM5DQ9BY66 1539 aa4.1□□□□□ -1.75
EFR3A-202ENST00000519656 MLH3Q9UHC1 1453 aa4.1□□□□□ -1.75
EFR3A-202ENST00000519656 EIF3AQ14152 1382 aaKnown RBP4.1□□□□□ -1.75
EFR3A-202ENST00000519656 RIMS1Q86UR5 1692 aaKnown RBP4.1□□□□□ -1.75
EFR3A-202ENST00000519656 APBA3O96018 575 aa4.1□□□□□ -1.75
EFR3A-202ENST00000519656 ITGAEP38570 1179 aa4.09□□□□□ -1.75
EFR3A-202ENST00000519656 TMX4Q9H1E5 349 aaPredicted RBP4.09□□□□□ -1.75
EFR3A-202ENST00000519656 RRP7BPQ9NSQ0 103 aa4.09□□□□□ -1.75
EFR3A-202ENST00000519656 MED1Q15648 1581 aaPredicted RBP4.09□□□□□ -1.75
EFR3A-202ENST00000519656 TCOF1Q13428 1488 aaKnown RBP4.09□□□□□ -1.75
EFR3A-202ENST00000519656 RTEL1-TNFRSF6BF6WH68 1400 aa4.09□□□□□ -1.75
EFR3A-202ENST00000519656 ARHGEF40Q8TER5 1519 aa4.09□□□□□ -1.75
EFR3A-202ENST00000519656 MADDQ8WXG6 1647 aa4.09□□□□□ -1.76
EFR3A-202ENST00000519656 KIAA1107Q9UPP5 1409 aa4.09□□□□□ -1.76
EFR3A-202ENST00000519656 NPHP1O15259 732 aa4.08□□□□□ -1.76
EFR3A-202ENST00000519656 CDCA7Q9BWT1 371 aaPredicted RBP4.08□□□□□ -1.76
EFR3A-202ENST00000519656 CHIC2Q9UKJ5 165 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms