RNA–Protein interactions for RNA: ENST00000519401.5

SPIDR-211, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,090 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-211ENST00000519401 NUDCQ9Y266 331 aa14.99□□□□□ -0.01
SPIDR-211ENST00000519401 PRDM4Q9UKN5 801 aa14.99□□□□□ -0.01
SPIDR-211ENST00000519401 NEO1Q92859 1461 aa14.98□□□□□ -0.01
SPIDR-211ENST00000519401 CNTLNQ9NXG0 1405 aa14.97□□□□□ -0.01
SPIDR-211ENST00000519401 A0A0U1RQG5 324 aaPredicted RBP14.97□□□□□ -0.01
SPIDR-211ENST00000519401 PDIA4P13667 645 aaKnown RBP14.97□□□□□ -0.01
SPIDR-211ENST00000519401 ARAP3Q8WWN8 1544 aa14.96□□□□□ -0.01
SPIDR-211ENST00000519401 SIN3AQ96ST3 1273 aa14.96□□□□□ -0.02
SPIDR-211ENST00000519401 PLCH2O75038 1416 aa14.95□□□□□ -0.02
SPIDR-211ENST00000519401 AKNAQ7Z591 1439 aa14.95□□□□□ -0.02
SPIDR-211ENST00000519401 FANCAO15360 1455 aa14.95□□□□□ -0.02
SPIDR-211ENST00000519401 TPM2P07951 284 aa14.95□□□□□ -0.02
SPIDR-211ENST00000519401 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.95□□□□□ -0.02
SPIDR-211ENST00000519401 MYO5CQ9NQX4 1742 aa14.92□□□□□ -0.02
SPIDR-211ENST00000519401 RAPGEF3O95398 923 aa14.92□□□□□ -0.02
SPIDR-211ENST00000519401 CFAP74Q9C0B2 1584 aa14.91□□□□□ -0.02
SPIDR-211ENST00000519401 MTUS2Q5JR59 1369 aa14.91□□□□□ -0.02
SPIDR-211ENST00000519401 FRMPD1Q5SYB0 1578 aa14.91□□□□□ -0.02
SPIDR-211ENST00000519401 HIRIP3Q9BW71 556 aaPredicted RBP14.9□□□□□ -0.02
SPIDR-211ENST00000519401 AEBP2Q6ZN18 517 aaPredicted RBP14.89□□□□□ -0.03
SPIDR-211ENST00000519401 PRKRIP1Q9H875 184 aaPredicted RBP14.89□□□□□ -0.03
SPIDR-211ENST00000519401 ARHGAP5Q13017 1502 aa14.89□□□□□ -0.03
SPIDR-211ENST00000519401 TONSLQ96HA7 1378 aa14.89□□□□□ -0.03
SPIDR-211ENST00000519401 EHBP1L1Q8N3D4 1523 aa14.89□□□□□ -0.03
SPIDR-211ENST00000519401 DENND4BO75064 1496 aaPredicted RBP14.88□□□□□ -0.03
SPIDR-211ENST00000519401 EFCAB2Q5VUJ9 269 aa14.88□□□□□ -0.03
SPIDR-211ENST00000519401 PREX2Q70Z35 1606 aa14.88□□□□□ -0.03
SPIDR-211ENST00000519401 ADGRL1O94910 1474 aa14.88□□□□□ -0.03
SPIDR-211ENST00000519401 CDC42BPBQ9Y5S2 1711 aa14.86□□□□□ -0.03
SPIDR-211ENST00000519401 FRAT2O75474 233 aaPredicted RBP14.86□□□□□ -0.03
SPIDR-211ENST00000519401 MRS2Q9HD23 443 aa14.86□□□□□ -0.03
SPIDR-211ENST00000519401 GPATCH8Q9UKJ3 1502 aaKnown RBP14.86□□□□□ -0.03
SPIDR-211ENST00000519401 SCAPERQ9BY12 1400 aa14.86□□□□□ -0.03
SPIDR-211ENST00000519401 CDC42BPAQ5VT25 1732 aa14.86□□□□□ -0.03
SPIDR-211ENST00000519401 MAP7D2Q96T17 732 aa14.85□□□□□ -0.03
SPIDR-211ENST00000519401 RICTORQ6R327 1708 aa14.85□□□□□ -0.03
SPIDR-211ENST00000519401 POGZQ7Z3K3 1410 aa14.84□□□□□ -0.03
SPIDR-211ENST00000519401 FAM9BQ8IZU0 186 aa14.84□□□□□ -0.03
SPIDR-211ENST00000519401 FAM50AQ14320 339 aaKnown RBP14.83□□□□□ -0.03
SPIDR-211ENST00000519401 CCDC184Q52MB2 194 aa14.83□□□□□ -0.03
SPIDR-211ENST00000519401 TAF7LQ5H9L4 462 aa14.83□□□□□ -0.03
SPIDR-211ENST00000519401 ARHGEF12Q9NZN5 1544 aa14.82□□□□□ -0.04
SPIDR-211ENST00000519401 POLR1AO95602 1720 aaPredicted RBP14.81□□□□□ -0.04
SPIDR-211ENST00000519401 NCLP19338 710 aaKnown RBP14.81□□□□□ -0.04
SPIDR-211ENST00000519401 ABCC1P33527 1531 aa14.81□□□□□ -0.04
SPIDR-211ENST00000519401 ZMYM4Q5VZL5 1548 aa14.81□□□□□ -0.04
SPIDR-211ENST00000519401 FGD6Q6ZV73 1430 aa14.81□□□□□ -0.04
SPIDR-211ENST00000519401 SAMD9LQ8IVG5 1584 aa14.8□□□□□ -0.04
SPIDR-211ENST00000519401 KDM4FA0A1W2PPD8 638 aa14.8□□□□□ -0.04
SPIDR-211ENST00000519401 SMAP1Q8IYB5 467 aaPredicted RBP14.8□□□□□ -0.04
SPIDR-211ENST00000519401 ZNF777Q9ULD5 760 aaPredicted RBP14.8□□□□□ -0.04
SPIDR-211ENST00000519401 TERF1P54274 439 aa14.79□□□□□ -0.04
SPIDR-211ENST00000519401 BCL11BQ9C0K0 894 aaPredicted RBP14.79□□□□□ -0.04
SPIDR-211ENST00000519401 YEATS2Q9ULM3 1422 aa14.79□□□□□ -0.04
SPIDR-211ENST00000519401 SUPT6HQ7KZ85 1726 aaKnown RBP14.79□□□□□ -0.04
SPIDR-211ENST00000519401 ARHGEF40Q8TER5 1519 aa14.79□□□□□ -0.04
SPIDR-211ENST00000519401 FSD2A1L4K1 749 aa14.78□□□□□ -0.04
SPIDR-211ENST00000519401 AFAP1Q8N556 730 aa14.78□□□□□ -0.04
SPIDR-211ENST00000519401 CFDP1Q9UEE9 299 aaPredicted RBP14.78□□□□□ -0.04
SPIDR-211ENST00000519401 NCOA1Q15788 1441 aa14.78□□□□□ -0.04
SPIDR-211ENST00000519401 TRAPPC8Q9Y2L5 1435 aa14.78□□□□□ -0.04
SPIDR-211ENST00000519401 PTPN23Q9H3S7 1636 aa14.78□□□□□ -0.04
SPIDR-211ENST00000519401 RRP1P56182 461 aaKnown RBP14.77□□□□□ -0.04
SPIDR-211ENST00000519401 ZNF518AQ6AHZ1 1483 aa14.77□□□□□ -0.04
SPIDR-211ENST00000519401 HFM1A2PYH4 1435 aa14.77□□□□□ -0.05
SPIDR-211ENST00000519401 ITSN2Q9NZM3 1697 aa14.77□□□□□ -0.05
SPIDR-211ENST00000519401 ZFYVE16Q7Z3T8 1539 aa14.76□□□□□ -0.05
SPIDR-211ENST00000519401 SYCP2Q9BX26 1530 aa14.76□□□□□ -0.05
SPIDR-211ENST00000519401 RGS3P49796 1198 aa14.76□□□□□ -0.05
SPIDR-211ENST00000519401 KDM5CP41229 1560 aa14.76□□□□□ -0.05
SPIDR-211ENST00000519401 ZNF644Q9H582 1327 aaPredicted RBP14.76□□□□□ -0.05
SPIDR-211ENST00000519401 ISY1Q9ULR0 285 aaKnown RBP14.75□□□□□ -0.05
SPIDR-211ENST00000519401 MAGI2Q86UL8 1455 aa14.75□□□□□ -0.05
SPIDR-211ENST00000519401 ZNF326Q5BKZ1 582 aaKnown RBP14.75□□□□□ -0.05
SPIDR-211ENST00000519401 HNRNPMP52272 730 aaKnown RBP eCLIP14.74□□□□□ -0.053e-6■■■■□ 25.9
SPIDR-211ENST00000519401 POGKQ9P215 609 aa14.74□□□□□ -0.05
SPIDR-211ENST00000519401 CCDC7Q96M83 1385 aa14.74□□□□□ -0.05
SPIDR-211ENST00000519401 PTPRKQ15262 1439 aa14.74□□□□□ -0.05
SPIDR-211ENST00000519401 GOLGA6L3A6NEY3 463 aa14.73□□□□□ -0.05
SPIDR-211ENST00000519401 XRCC6P12956 609 aaKnown RBP eCLIP14.73□□□□□ -0.05
SPIDR-211ENST00000519401 UTP14CQ5TAP6 766 aaKnown RBP14.73□□□□□ -0.05
SPIDR-211ENST00000519401 MTERF4Q7Z6M4 381 aaKnown RBP14.73□□□□□ -0.05
SPIDR-211ENST00000519401 KIAA1107Q9UPP5 1409 aa14.72□□□□□ -0.05
SPIDR-211ENST00000519401 ESPNB1AK53 854 aa14.72□□□□□ -0.05
SPIDR-211ENST00000519401 PLEKHH2Q8IVE3 1493 aa14.72□□□□□ -0.05
SPIDR-211ENST00000519401 HSPA5P11021 654 aaKnown RBP14.72□□□□□ -0.05
SPIDR-211ENST00000519401 HECW2Q9P2P5 1572 aa14.71□□□□□ -0.05
SPIDR-211ENST00000519401 SIGLEC1Q9BZZ2 1709 aa14.71□□□□□ -0.05
SPIDR-211ENST00000519401 EIF4G2P78344 907 aaKnown RBP eCLIP14.71□□□□□ -0.053e-6■■■□□ 18.8
SPIDR-211ENST00000519401 EXOC6Q8TAG9 804 aa14.71□□□□□ -0.05
SPIDR-211ENST00000519401 MLH3Q9UHC1 1453 aa14.7□□□□□ -0.06
SPIDR-211ENST00000519401 NAIPQ13075 1403 aa14.7□□□□□ -0.06
SPIDR-211ENST00000519401 FAM161AQ3B820 660 aa14.7□□□□□ -0.06
SPIDR-211ENST00000519401 CAMSAP2Q08AD1 1489 aa14.7□□□□□ -0.06
SPIDR-211ENST00000519401 MBD5Q9P267 1494 aa14.7□□□□□ -0.06
SPIDR-211ENST00000519401 MYOM3Q5VTT5 1437 aa14.7□□□□□ -0.06
SPIDR-211ENST00000519401 SLC4A3P48751 1232 aa14.69□□□□□ -0.06
SPIDR-211ENST00000519401 MRE11P49959 708 aa14.69□□□□□ -0.06
SPIDR-211ENST00000519401 ATP10AO60312 1499 aa14.69□□□□□ -0.06
SPIDR-211ENST00000519401 DIP2CQ9Y2E4 1556 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms