RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 FGD5Q6ZNL6 1462 aa11.26□□□□□ -0.61
PABPC1-207ENST00000518716 HRO43593 1189 aa11.25□□□□□ -0.61
PABPC1-207ENST00000518716 GAPVD1Q14C86 1478 aa11.25□□□□□ -0.61
PABPC1-207ENST00000518716 CUX1P39880 1505 aa11.25□□□□□ -0.61
PABPC1-207ENST00000518716 DMRTA1Q5VZB9 504 aa11.24□□□□□ -0.61
PABPC1-207ENST00000518716 KDM4FA0A1W2PPD8 638 aa11.21□□□□□ -0.61
PABPC1-207ENST00000518716 TK2O00142 265 aa11.21□□□□□ -0.61
PABPC1-207ENST00000518716 PSEN2P49810 448 aa11.2□□□□□ -0.62
PABPC1-207ENST00000518716 STK24Q9Y6E0 443 aa11.2□□□□□ -0.62
PABPC1-207ENST00000518716 KCTD12Q96CX2 325 aaKnown RBP11.19□□□□□ -0.62
PABPC1-207ENST00000518716 PSDA5PKW4 1024 aaPredicted RBP11.18□□□□□ -0.62
PABPC1-207ENST00000518716 ERCC6L2Q5T890 1561 aa11.17□□□□□ -0.62
PABPC1-207ENST00000518716 TMC2Q8TDI7 906 aa11.17□□□□□ -0.62
PABPC1-207ENST00000518716 ABCA10Q8WWZ4 1543 aa11.16□□□□□ -0.62
PABPC1-207ENST00000518716 ABCA5Q8WWZ7 1642 aa11.14□□□□□ -0.63
PABPC1-207ENST00000518716 NUP160Q12769 1436 aa11.14□□□□□ -0.63
PABPC1-207ENST00000518716 PBRM1Q86U86 1689 aa11.14□□□□□ -0.63
PABPC1-207ENST00000518716 GRIN2AQ12879 1464 aa11.12□□□□□ -0.63
PABPC1-207ENST00000518716 PTCD2Q8WV60 388 aaKnown RBP11.11□□□□□ -0.63
PABPC1-207ENST00000518716 CEP170Q5SW79 1584 aa11.11□□□□□ -0.63
PABPC1-207ENST00000518716 STK25O00506 426 aa11.1□□□□□ -0.63
PABPC1-207ENST00000518716 SHROOM2Q13796 1616 aa11.09□□□□□ -0.63
PABPC1-207ENST00000518716 TAOK2Q9UL54 1235 aa11.08□□□□□ -0.64
PABPC1-207ENST00000518716 PPP1R37O75864 691 aa11.07□□□□□ -0.64
PABPC1-207ENST00000518716 KIF13AQ9H1H9 1805 aa11.07□□□□□ -0.64
PABPC1-207ENST00000518716 RGS20O76081 388 aa11.06□□□□□ -0.64
PABPC1-207ENST00000518716 PTPN5P54829 565 aa11.06□□□□□ -0.64
PABPC1-207ENST00000518716 PPP4R3BQ5MIZ7 849 aa11.06□□□□□ -0.64
PABPC1-207ENST00000518716 IRX2Q9BZI1 471 aaPredicted RBP11.06□□□□□ -0.64
PABPC1-207ENST00000518716 ADAMTS12P58397 1594 aa11.06□□□□□ -0.64
PABPC1-207ENST00000518716 KCNK17Q96T54 332 aa11.05□□□□□ -0.64
PABPC1-207ENST00000518716 FHAD1B1AJZ9 1412 aa11.04□□□□□ -0.64
PABPC1-207ENST00000518716 IFFO2Q5TF58 517 aa11.04□□□□□ -0.64
PABPC1-207ENST00000518716 STAC3Q96MF2 364 aa11.04□□□□□ -0.64
PABPC1-207ENST00000518716 WRNQ14191 1432 aaPredicted RBP eCLIP11.03□□□□□ -0.64
PABPC1-207ENST00000518716 VPS9D1Q9Y2B5 631 aa11.03□□□□□ -0.64
PABPC1-207ENST00000518716 ABCC10Q5T3U5 1492 aa11.01□□□□□ -0.65
PABPC1-207ENST00000518716 JPH4Q96JJ6 628 aa11.01□□□□□ -0.65
PABPC1-207ENST00000518716 PRG4Q92954 1404 aaPredicted RBP11.01□□□□□ -0.65
PABPC1-207ENST00000518716 A0A0G2JS52 829 aa11□□□□□ -0.65
PABPC1-207ENST00000518716 ERICH3Q5RHP9 1530 aa10.99□□□□□ -0.65
PABPC1-207ENST00000518716 FOXK1P85037 733 aa10.99□□□□□ -0.65
PABPC1-207ENST00000518716 PLPP6Q8IY26 295 aa10.99□□□□□ -0.65
PABPC1-207ENST00000518716 FAM69CQ0P6D2 419 aa10.98□□□□□ -0.65
PABPC1-207ENST00000518716 MAPKBP1O60336 1514 aa10.98□□□□□ -0.65
PABPC1-207ENST00000518716 TOP2BQ02880 1626 aa10.97□□□□□ -0.65
PABPC1-207ENST00000518716 THSD4Q6ZMP0 1018 aa10.96□□□□□ -0.65
PABPC1-207ENST00000518716 BIVM-ERCC5R4GMW8 1640 aa10.95□□□□□ -0.66
PABPC1-207ENST00000518716 DIP2BQ9P265 1576 aa10.94□□□□□ -0.66
PABPC1-207ENST00000518716 KCNH8Q96L42 1107 aa10.94□□□□□ -0.66
PABPC1-207ENST00000518716 BHMG1C9JSJ3 638 aaPredicted RBP10.93□□□□□ -0.66
PABPC1-207ENST00000518716 DSG2Q14126 1118 aa10.93□□□□□ -0.66
PABPC1-207ENST00000518716 GPHNQ9NQX3 736 aaPredicted RBP10.93□□□□□ -0.66
PABPC1-207ENST00000518716 ADCY10Q96PN6 1610 aa10.92□□□□□ -0.66
PABPC1-207ENST00000518716 SLC4A5Q9BY07 1137 aa10.92□□□□□ -0.66
PABPC1-207ENST00000518716 TBC1D12O60347 775 aa10.91□□□□□ -0.66
PABPC1-207ENST00000518716 RUSC2Q8N2Y8 1516 aa10.9□□□□□ -0.66
PABPC1-207ENST00000518716 RGL2O15211 777 aa10.89□□□□□ -0.67
PABPC1-207ENST00000518716 ECM2O94769 699 aaPredicted RBP10.89□□□□□ -0.67
PABPC1-207ENST00000518716 WNT2BQ93097 391 aa10.88□□□□□ -0.67
PABPC1-207ENST00000518716 BCL2L12Q9HB09 334 aa10.88□□□□□ -0.67
PABPC1-207ENST00000518716 KDM6BO15054 1643 aa10.87□□□□□ -0.67
PABPC1-207ENST00000518716 ZNF454Q8N9F8 522 aa10.87□□□□□ -0.67
PABPC1-207ENST00000518716 KIAA0586Q9BVV6 1533 aa10.87□□□□□ -0.67
PABPC1-207ENST00000518716 OXER1Q8TDS5 423 aa10.86□□□□□ -0.67
PABPC1-207ENST00000518716 ZBED2Q9BTP6 218 aa10.85□□□□□ -0.67
PABPC1-207ENST00000518716 IGF1RP08069 1367 aa10.85□□□□□ -0.67
PABPC1-207ENST00000518716 GOLGA8CPA6NN73 597 aa10.83□□□□□ -0.68
PABPC1-207ENST00000518716 MRPL50Q8N5N7 158 aaKnown RBP10.83□□□□□ -0.68
PABPC1-207ENST00000518716 TSPOAP1O95153 1857 aa10.81□□□□□ -0.68
PABPC1-207ENST00000518716 PTPREP23469 700 aa10.81□□□□□ -0.68
PABPC1-207ENST00000518716 FOSBP53539 338 aa10.81□□□□□ -0.68
PABPC1-207ENST00000518716 UPF1Q92900 1129 aaKnown RBP eCLIP10.81□□□□□ -0.68
PABPC1-207ENST00000518716 COL17A1Q9UMD9 1497 aaPredicted RBP10.81□□□□□ -0.68
PABPC1-207ENST00000518716 SUPT5HO00267 1087 aaKnown RBP10.8□□□□□ -0.68
PABPC1-207ENST00000518716 PTPRGP23470 1445 aa10.8□□□□□ -0.68
PABPC1-207ENST00000518716 GLI2P10070 1586 aa10.8□□□□□ -0.68
PABPC1-207ENST00000518716 PPRC1Q5VV67 1664 aaKnown RBP10.79□□□□□ -0.68
PABPC1-207ENST00000518716 PKD2Q13563 968 aa10.79□□□□□ -0.68
PABPC1-207ENST00000518716 Q6ZNB5 142 aa10.79□□□□□ -0.68
PABPC1-207ENST00000518716 ABCC2Q92887 1545 aa10.79□□□□□ -0.68
PABPC1-207ENST00000518716 ADGRL1O94910 1474 aa10.78□□□□□ -0.68
PABPC1-207ENST00000518716 ASXL2Q76L83 1435 aa10.77□□□□□ -0.68
PABPC1-207ENST00000518716 PLB1Q6P1J6 1458 aa10.77□□□□□ -0.69
PABPC1-207ENST00000518716 ITGBL1O95965 494 aaPredicted RBP10.77□□□□□ -0.69
PABPC1-207ENST00000518716 UHRF1BP1LA0JNW5 1464 aa10.76□□□□□ -0.69
PABPC1-207ENST00000518716 TNIKQ9UKE5 1360 aa10.76□□□□□ -0.69
PABPC1-207ENST00000518716 NBPF3Q9H094 633 aa10.75□□□□□ -0.69
PABPC1-207ENST00000518716 ADAM33Q9BZ11 813 aa10.74□□□□□ -0.69
PABPC1-207ENST00000518716 KIF27Q86VH2 1401 aa10.74□□□□□ -0.69
PABPC1-207ENST00000518716 CUL7Q14999 1698 aa10.73□□□□□ -0.69
PABPC1-207ENST00000518716 LCE2BO14633 110 aa10.72□□□□□ -0.69
PABPC1-207ENST00000518716 CARMIL1Q5VZK9 1371 aa10.72□□□□□ -0.69
PABPC1-207ENST00000518716 UACAQ9BZF9 1416 aa10.72□□□□□ -0.69
PABPC1-207ENST00000518716 EPRSP07814 1512 aaKnown RBP10.72□□□□□ -0.69
PABPC1-207ENST00000518716 KDM5BQ9UGL1 1544 aa10.72□□□□□ -0.69
PABPC1-207ENST00000518716 CARMIL2Q6F5E8 1435 aa10.71□□□□□ -0.69
PABPC1-207ENST00000518716 DISP1Q96F81 1524 aa10.71□□□□□ -0.69
PABPC1-207ENST00000518716 ANO8Q9HCE9 1232 aaPredicted RBP10.71□□□□□ -0.69
PABPC1-207ENST00000518716 HECW2Q9P2P5 1572 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms