RNA–Protein interactions for RNA: ENST00000518323.1

EBF1-204, Transcript of early B cell factor 1, humanhuman

TSL 2

Gene EBF1, Length 602 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-204ENST00000518323 KCNK17Q96T54 332 aa9.72□□□□□ -0.85
EBF1-204ENST00000518323 LARP6Q9BRS8 491 aaKnown RBP9.72□□□□□ -0.85
EBF1-204ENST00000518323 CCDC88BA6NC98 1476 aa9.72□□□□□ -0.85
EBF1-204ENST00000518323 KIF21AQ7Z4S6 1674 aa9.71□□□□□ -0.85
EBF1-204ENST00000518323 CADPS2Q86UW7 1296 aa9.71□□□□□ -0.86
EBF1-204ENST00000518323 CRISPLD2Q9H0B8 497 aa9.71□□□□□ -0.86
EBF1-204ENST00000518323 ERCC6Q03468 1493 aa9.71□□□□□ -0.86
EBF1-204ENST00000518323 UPF1Q92900 1129 aaKnown RBP eCLIP9.7□□□□□ -0.86
EBF1-204ENST00000518323 PRDM2Q13029 1718 aa9.7□□□□□ -0.86
EBF1-204ENST00000518323 HAP1P54257 671 aaPredicted RBP9.69□□□□□ -0.86
EBF1-204ENST00000518323 NCKAP5LQ9HCH0 1330 aa9.69□□□□□ -0.86
EBF1-204ENST00000518323 TSHZ2Q9NRE2 1034 aa9.69□□□□□ -0.86
EBF1-204ENST00000518323 VPS9D1Q9Y2B5 631 aa9.69□□□□□ -0.86
EBF1-204ENST00000518323 DDX27Q96GQ7 796 aaKnown RBP9.68□□□□□ -0.86
EBF1-204ENST00000518323 PPP1R15BQ5SWA1 713 aa9.67□□□□□ -0.86
EBF1-204ENST00000518323 WDR70Q9NW82 654 aa9.67□□□□□ -0.86
EBF1-204ENST00000518323 THOC2Q8NI27 1593 aaKnown RBP9.67□□□□□ -0.86
EBF1-204ENST00000518323 ZNF454Q8N9F8 522 aa9.66□□□□□ -0.86
EBF1-204ENST00000518323 STAC3Q96MF2 364 aa9.65□□□□□ -0.86
EBF1-204ENST00000518323 BCL2L12Q9HB09 334 aa9.64□□□□□ -0.87
EBF1-204ENST00000518323 FOSBP53539 338 aa9.63□□□□□ -0.87
EBF1-204ENST00000518323 PTPN5P54829 565 aa9.63□□□□□ -0.87
EBF1-204ENST00000518323 FANCD2Q9BXW9 1451 aa9.62□□□□□ -0.87
EBF1-204ENST00000518323 KCNH8Q96L42 1107 aa9.62□□□□□ -0.87
EBF1-204ENST00000518323 BHMG1C9JSJ3 638 aaPredicted RBP9.61□□□□□ -0.87
EBF1-204ENST00000518323 MFSD10Q14728 455 aa9.61□□□□□ -0.87
EBF1-204ENST00000518323 SLC4A5Q9BY07 1137 aa9.61□□□□□ -0.87
EBF1-204ENST00000518323 MRC2Q9UBG0 1479 aa9.6□□□□□ -0.87
EBF1-204ENST00000518323 ANO8Q9HCE9 1232 aaPredicted RBP9.6□□□□□ -0.87
EBF1-204ENST00000518323 WDR62O43379 1518 aa9.6□□□□□ -0.87
EBF1-204ENST00000518323 CEP164Q9UPV0 1460 aa9.59□□□□□ -0.87
EBF1-204ENST00000518323 ZBED2Q9BTP6 218 aa9.59□□□□□ -0.87
EBF1-204ENST00000518323 SUPT5HO00267 1087 aaKnown RBP9.57□□□□□ -0.88
EBF1-204ENST00000518323 PTPREP23469 700 aa9.57□□□□□ -0.88
EBF1-204ENST00000518323 THSD4Q6ZMP0 1018 aa9.57□□□□□ -0.88
EBF1-204ENST00000518323 ADAM33Q9BZ11 813 aa9.57□□□□□ -0.88
EBF1-204ENST00000518323 EVI5O60447 810 aa9.56□□□□□ -0.88
EBF1-204ENST00000518323 JPH4Q96JJ6 628 aa9.55□□□□□ -0.88
EBF1-204ENST00000518323 URB2Q14146 1524 aaKnown RBP9.55□□□□□ -0.88
EBF1-204ENST00000518323 MAP3K9P80192 1104 aa9.54□□□□□ -0.88
EBF1-204ENST00000518323 ABCC8Q09428 1581 aa9.54□□□□□ -0.88
EBF1-204ENST00000518323 E2F4Q16254 413 aa9.53□□□□□ -0.88
EBF1-204ENST00000518323 ZDHHC16Q969W1 377 aa9.53□□□□□ -0.88
EBF1-204ENST00000518323 IFFO2Q5TF58 517 aa9.52□□□□□ -0.89
EBF1-204ENST00000518323 WNT2BQ93097 391 aa9.52□□□□□ -0.89
EBF1-204ENST00000518323 MRPL50Q8N5N7 158 aaKnown RBP9.51□□□□□ -0.89
EBF1-204ENST00000518323 GOLGA8CPA6NN73 597 aa9.5□□□□□ -0.89
EBF1-204ENST00000518323 EMILIN3Q9NT22 766 aa9.5□□□□□ -0.89
EBF1-204ENST00000518323 CAMK2BQ13554 666 aa9.49□□□□□ -0.89
EBF1-204ENST00000518323 VSIG10Q8N0Z9 540 aa9.49□□□□□ -0.89
EBF1-204ENST00000518323 TOPBP1Q92547 1522 aa9.49□□□□□ -0.89
EBF1-204ENST00000518323 DNMBPQ6XZF7 1577 aa9.47□□□□□ -0.89
EBF1-204ENST00000518323 PCDHGA10Q9Y5H3 936 aa9.47□□□□□ -0.89
EBF1-204ENST00000518323 A0A0G2JS52 829 aa9.46□□□□□ -0.9
EBF1-204ENST00000518323 DPYSL4O14531 572 aa9.46□□□□□ -0.9
EBF1-204ENST00000518323 COL9A1P20849 921 aa9.46□□□□□ -0.9
EBF1-204ENST00000518323 PROX2Q3B8N5 592 aa9.46□□□□□ -0.9
EBF1-204ENST00000518323 NBPF3Q9H094 633 aa9.46□□□□□ -0.9
EBF1-204ENST00000518323 RGS20O76081 388 aa9.45□□□□□ -0.9
EBF1-204ENST00000518323 PPP1R3GB7ZBB8 358 aa9.44□□□□□ -0.9
EBF1-204ENST00000518323 P3H3Q8IVL6 736 aa9.44□□□□□ -0.9
EBF1-204ENST00000518323 TARBP1Q13395 1621 aaKnown RBP9.43□□□□□ -0.9
EBF1-204ENST00000518323 IFT140Q96RY7 1462 aa9.43□□□□□ -0.9
EBF1-204ENST00000518323 KDM2AQ9Y2K7 1162 aa9.43□□□□□ -0.9
EBF1-204ENST00000518323 RABGEF1Q9UJ41 708 aa9.42□□□□□ -0.9
EBF1-204ENST00000518323 CUX1P39880 1505 aa9.41□□□□□ -0.9
EBF1-204ENST00000518323 KCNV2Q8TDN2 545 aa9.4□□□□□ -0.9
EBF1-204ENST00000518323 POLA1P09884 1462 aaPredicted RBP9.4□□□□□ -0.91
EBF1-204ENST00000518323 SPDYE16A6NNV3 312 aaPredicted RBP9.39□□□□□ -0.91
EBF1-204ENST00000518323 BCAMP50895 628 aa9.39□□□□□ -0.91
EBF1-204ENST00000518323 IRX2Q9BZI1 471 aaPredicted RBP9.39□□□□□ -0.91
EBF1-204ENST00000518323 PHF14O94880 888 aa9.38□□□□□ -0.91
EBF1-204ENST00000518323 TYW1BQ6NUM6 668 aa9.38□□□□□ -0.91
EBF1-204ENST00000518323 ANKK1Q8NFD2 765 aa9.38□□□□□ -0.91
EBF1-204ENST00000518323 ARHGEF1Q92888 912 aaKnown RBP9.38□□□□□ -0.91
EBF1-204ENST00000518323 ARIH1Q9Y4X5 557 aaPredicted RBP9.38□□□□□ -0.91
EBF1-204ENST00000518323 WDR97A6NE52 1622 aa9.37□□□□□ -0.91
EBF1-204ENST00000518323 BIVM-ERCC5R4GMW8 1640 aa9.37□□□□□ -0.91
EBF1-204ENST00000518323 SOGA1O94964 1423 aa9.37□□□□□ -0.91
EBF1-204ENST00000518323 ZNF608Q9ULD9 1512 aaPredicted RBP9.36□□□□□ -0.91
EBF1-204ENST00000518323 ITGBL1O95965 494 aaPredicted RBP9.36□□□□□ -0.91
EBF1-204ENST00000518323 FBXW7Q969H0 707 aa9.36□□□□□ -0.91
EBF1-204ENST00000518323 KIAA1468Q9P260 1216 aa9.36□□□□□ -0.91
EBF1-204ENST00000518323 FGD5Q6ZNL6 1462 aa9.35□□□□□ -0.91
EBF1-204ENST00000518323 SOWAHBA6NEL2 793 aa9.35□□□□□ -0.91
EBF1-204ENST00000518323 PDIA6Q15084 440 aa9.35□□□□□ -0.91
EBF1-204ENST00000518323 TOP2BQ02880 1626 aa9.34□□□□□ -0.91
EBF1-204ENST00000518323 RAD54L2Q9Y4B4 1467 aa9.34□□□□□ -0.91
EBF1-204ENST00000518323 LAPTM4BQ86VI4 370 aa9.34□□□□□ -0.91
EBF1-204ENST00000518323 DDX12PQ92771 950 aa9.34□□□□□ -0.91
EBF1-204ENST00000518323 ZFRQ96KR1 1074 aaKnown RBP9.34□□□□□ -0.91
EBF1-204ENST00000518323 SLC24A1O60721 1099 aa9.33□□□□□ -0.92
EBF1-204ENST00000518323 C6orf132Q5T0Z8 1188 aa9.33□□□□□ -0.92
EBF1-204ENST00000518323 WBP1LQ9NX94 342 aa9.33□□□□□ -0.92
EBF1-204ENST00000518323 SEPT9Q9UHD8 586 aaPredicted RBP9.33□□□□□ -0.92
EBF1-204ENST00000518323 WRNQ14191 1432 aaPredicted RBP eCLIP9.32□□□□□ -0.92
EBF1-204ENST00000518323 AQRO60306 1485 aaKnown RBP eCLIP9.32□□□□□ -0.92
EBF1-204ENST00000518323 EIF4G3O43432 1585 aaKnown RBP9.32□□□□□ -0.92
EBF1-204ENST00000518323 GRXCR2A6NFK2 248 aa9.31□□□□□ -0.92
EBF1-204ENST00000518323 SYNJ1O43426 1573 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms