RNA–Protein interactions for RNA: ENST00000518323.1

EBF1-204, Transcript of early B cell factor 1, humanhuman

TSL 2

Gene EBF1, Length 602 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-204ENST00000518323 AEBP2Q6ZN18 517 aaPredicted RBP23.75■■□□□ 1.39
EBF1-204ENST00000518323 CHIC1Q5VXU3 224 aa22.32■■□□□ 1.16
EBF1-204ENST00000518323 SENP3Q9H4L4 574 aaPredicted RBP20.18■□□□□ 0.82
EBF1-204ENST00000518323 PHF23Q9BUL5 403 aaPredicted RBP19.95■□□□□ 0.78
EBF1-204ENST00000518323 FOXD1Q16676 465 aa18.9■□□□□ 0.62
EBF1-204ENST00000518323 PLPPR3Q6T4P5 718 aa17.71■□□□□ 0.43
EBF1-204ENST00000518323 MSH5O43196 834 aa17.67■□□□□ 0.42
EBF1-204ENST00000518323 POTEDQ86YR6 584 aa17.62■□□□□ 0.41
EBF1-204ENST00000518323 PPP6R1Q9UPN7 881 aa17.59■□□□□ 0.41
EBF1-204ENST00000518323 PIAS4Q8N2W9 510 aaPredicted RBP17.57■□□□□ 0.4
EBF1-204ENST00000518323 ADRA2BP18089 450 aa17.49■□□□□ 0.39
EBF1-204ENST00000518323 MAPK8IP2Q13387 824 aaPredicted RBP16.14■□□□□ 0.17
EBF1-204ENST00000518323 DMRT2Q9Y5R5 561 aa16■□□□□ 0.15
EBF1-204ENST00000518323 SCAF1Q9H7N4 1312 aaKnown RBP15.89■□□□□ 0.13
EBF1-204ENST00000518323 PPP4R3CPQ6ZMV5 832 aa15.54■□□□□ 0.08
EBF1-204ENST00000518323 HOXD11P31277 338 aaPredicted RBP15.35■□□□□ 0.05
EBF1-204ENST00000518323 DCAF8L1A6NGE4 600 aa15.34■□□□□ 0.05
EBF1-204ENST00000518323 CACNB1Q02641 598 aaPredicted RBP15.3■□□□□ 0.04
EBF1-204ENST00000518323 CNKSR2Q8WXI2 1034 aa15.26■□□□□ 0.03
EBF1-204ENST00000518323 RNF216Q9NWF9 866 aaPredicted RBP15.16■□□□□ 0.02
EBF1-204ENST00000518323 RNF39Q9H2S5 420 aa15.11■□□□□ 0.01
EBF1-204ENST00000518323 C1QBPQ07021 282 aaKnown RBP14.84□□□□□ -0.03
EBF1-204ENST00000518323 NCBP3Q53F19 620 aaKnown RBP14.81□□□□□ -0.04
EBF1-204ENST00000518323 DNAJC5BQ9UF47 199 aa14.8□□□□□ -0.04
EBF1-204ENST00000518323 NPM3O75607 178 aaKnown RBP14.69□□□□□ -0.06
EBF1-204ENST00000518323 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.6□□□□□ -0.07
EBF1-204ENST00000518323 U3KPZ7 1027 aaPredicted RBP14.32□□□□□ -0.12
EBF1-204ENST00000518323 KCNA4P22459 653 aa14.27□□□□□ -0.13
EBF1-204ENST00000518323 SPINK5Q9NQ38 1064 aaPredicted RBP14.19□□□□□ -0.14
EBF1-204ENST00000518323 CAPN15O75808 1086 aa14.11□□□□□ -0.15
EBF1-204ENST00000518323 SLC4A2P04920 1241 aa14.11□□□□□ -0.15
EBF1-204ENST00000518323 DSG3P32926 999 aa14.1□□□□□ -0.15
EBF1-204ENST00000518323 TRHP20396 242 aaPredicted RBP13.86□□□□□ -0.19
EBF1-204ENST00000518323 ABCB7O75027 752 aa13.8□□□□□ -0.2
EBF1-204ENST00000518323 ZNF219Q9P2Y4 722 aaPredicted RBP13.77□□□□□ -0.21
EBF1-204ENST00000518323 APLP2Q06481 763 aa13.76□□□□□ -0.21
EBF1-204ENST00000518323 POTEHQ6S545 545 aa13.75□□□□□ -0.21
EBF1-204ENST00000518323 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.74□□□□□ -0.21
EBF1-204ENST00000518323 HNRNPUL2Q1KMD3 747 aaKnown RBP13.74□□□□□ -0.21
EBF1-204ENST00000518323 SAMD1Q6SPF0 538 aaPredicted RBP13.69□□□□□ -0.22
EBF1-204ENST00000518323 SLC4A1APQ9BWU0 796 aaKnown RBP13.56□□□□□ -0.24
EBF1-204ENST00000518323 MYCNP04198 464 aaPredicted RBP13.54□□□□□ -0.24
EBF1-204ENST00000518323 POLA2Q14181 598 aa13.45□□□□□ -0.26
EBF1-204ENST00000518323 RBM42Q9BTD8 480 aaKnown RBP13.37□□□□□ -0.27
EBF1-204ENST00000518323 ATF5Q9Y2D1 282 aaPredicted RBP13.34□□□□□ -0.27
EBF1-204ENST00000518323 FOXD4L1Q9NU39 408 aa13.32□□□□□ -0.28
EBF1-204ENST00000518323 CHRDL2Q6WN34 429 aa13.21□□□□□ -0.29
EBF1-204ENST00000518323 ZBTB22O15209 634 aa13.16□□□□□ -0.3
EBF1-204ENST00000518323 EHMT2Q96KQ7 1210 aa13.08□□□□□ -0.32
EBF1-204ENST00000518323 ZBTB12Q9Y330 459 aaPredicted RBP13.08□□□□□ -0.32
EBF1-204ENST00000518323 AKT1S1Q96B36 256 aa13.07□□□□□ -0.32
EBF1-204ENST00000518323 NISCHQ9Y2I1 1504 aa13.06□□□□□ -0.32
EBF1-204ENST00000518323 OSCARQ8IYS5 282 aa13.03□□□□□ -0.32
EBF1-204ENST00000518323 REM2Q8IYK8 340 aaPredicted RBP12.98□□□□□ -0.33
EBF1-204ENST00000518323 ATXN8OSP0DMR3 200 aa12.9□□□□□ -0.34
EBF1-204ENST00000518323 CSRNP3Q8WYN3 585 aa12.9□□□□□ -0.34
EBF1-204ENST00000518323 PIP4P2Q8N4L2 257 aa12.88□□□□□ -0.35
EBF1-204ENST00000518323 PITPNM1O00562 1244 aa12.85□□□□□ -0.35
EBF1-204ENST00000518323 SP7Q8TDD2 431 aaPredicted RBP12.8□□□□□ -0.36
EBF1-204ENST00000518323 FXR2P51116 673 aaKnown RBP eCLIP12.77□□□□□ -0.37
EBF1-204ENST00000518323 SPDYE2BA6NHP3 402 aa12.71□□□□□ -0.37
EBF1-204ENST00000518323 SPDYE6P0CI01 402 aa12.71□□□□□ -0.37
EBF1-204ENST00000518323 MKRN4PQ13434 485 aaPredicted RBP12.71□□□□□ -0.37
EBF1-204ENST00000518323 SPDYE2Q495Y8 402 aa12.71□□□□□ -0.37
EBF1-204ENST00000518323 FBLN2P98095 1184 aa12.7□□□□□ -0.38
EBF1-204ENST00000518323 HAX1O00165 279 aa12.67□□□□□ -0.38
EBF1-204ENST00000518323 EVX2Q03828 476 aa12.59□□□□□ -0.39
EBF1-204ENST00000518323 SSUH2Q9Y2M2 353 aa12.56□□□□□ -0.4
EBF1-204ENST00000518323 ZNF692Q9BU19 519 aaPredicted RBP12.54□□□□□ -0.4
EBF1-204ENST00000518323 CLEC11AQ9Y240 323 aa12.53□□□□□ -0.4
EBF1-204ENST00000518323 SPDYE1Q8NFV5 336 aaPredicted RBP12.52□□□□□ -0.41
EBF1-204ENST00000518323 PRKAR2AP13861 404 aaKnown RBP12.5□□□□□ -0.41
EBF1-204ENST00000518323 PABPN1Q86U42 306 aaKnown RBP eCLIP12.37□□□□□ -0.43
EBF1-204ENST00000518323 C19orf67A6NJJ6 358 aa12.36□□□□□ -0.43
EBF1-204ENST00000518323 CHADLQ6NUI6 762 aa12.36□□□□□ -0.43
EBF1-204ENST00000518323 PRR29P0C7W0 189 aa12.29□□□□□ -0.44
EBF1-204ENST00000518323 GABBR2O75899 941 aa12.24□□□□□ -0.45
EBF1-204ENST00000518323 FARP1Q9Y4F1 1045 aaPredicted RBP12.12□□□□□ -0.47
EBF1-204ENST00000518323 CD44P16070 742 aaKnown RBP12.08□□□□□ -0.48
EBF1-204ENST00000518323 POTEIP0CG38 1075 aa12.03□□□□□ -0.48
EBF1-204ENST00000518323 LHX8Q68G74 356 aa12.01□□□□□ -0.49
EBF1-204ENST00000518323 CREBZFQ9NS37 354 aa11.99□□□□□ -0.49
EBF1-204ENST00000518323 SPDYE4A6NLX3 237 aa11.95□□□□□ -0.5
EBF1-204ENST00000518323 STAG3Q9UJ98 1225 aa11.92□□□□□ -0.5
EBF1-204ENST00000518323 ZNF579Q8NAF0 562 aaKnown RBP11.89□□□□□ -0.51
EBF1-204ENST00000518323 ZRANB1Q9UGI0 708 aa11.89□□□□□ -0.51
EBF1-204ENST00000518323 CLCN6P51797 869 aa11.88□□□□□ -0.51
EBF1-204ENST00000518323 DCBLD2Q96PD2 775 aa11.82□□□□□ -0.52
EBF1-204ENST00000518323 GALR2O43603 387 aaPredicted RBP11.8□□□□□ -0.52
EBF1-204ENST00000518323 MNX1P50219 401 aaPredicted RBP11.79□□□□□ -0.52
EBF1-204ENST00000518323 FKBP8Q14318 412 aa11.74□□□□□ -0.53
EBF1-204ENST00000518323 PHF12Q96QT6 1004 aa11.74□□□□□ -0.53
EBF1-204ENST00000518323 PAK3O75914 559 aaPredicted RBP11.68□□□□□ -0.54
EBF1-204ENST00000518323 NPM1P06748 294 aaKnown RBP eCLIP11.68□□□□□ -0.54
EBF1-204ENST00000518323 PROM2Q8N271 834 aa11.67□□□□□ -0.54
EBF1-204ENST00000518323 CCDC180Q9P1Z9 1646 aa11.64□□□□□ -0.55
EBF1-204ENST00000518323 POTEB2H3BUK9 544 aa11.63□□□□□ -0.55
EBF1-204ENST00000518323 PELP1Q8IZL8 1130 aaKnown RBP11.62□□□□□ -0.55
EBF1-204ENST00000518323 OTUD5Q96G74 571 aa11.59□□□□□ -0.55
EBF1-204ENST00000518323 MS4A3Q96HJ5 214 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms