RNA–Protein interactions for RNA: ENST00000518290.1

ARFGEF1-204, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARFGEF1, Length 3,179 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-204ENST00000518290 ZMYM4Q5VZL5 1548 aa11.6□□□□□ -0.55
ARFGEF1-204ENST00000518290 ZC3H13Q5T200 1668 aaKnown RBP11.59□□□□□ -0.55
ARFGEF1-204ENST00000518290 RALGAPBQ86X10 1494 aa11.59□□□□□ -0.55
ARFGEF1-204ENST00000518290 MLH3Q9UHC1 1453 aa11.59□□□□□ -0.55
ARFGEF1-204ENST00000518290 CHIC2Q9UKJ5 165 aa11.59□□□□□ -0.55
ARFGEF1-204ENST00000518290 FRMPD1Q5SYB0 1578 aa11.59□□□□□ -0.55
ARFGEF1-204ENST00000518290 REREQ9P2R6 1566 aa11.59□□□□□ -0.55
ARFGEF1-204ENST00000518290 KIAA1210Q9ULL0 1709 aa11.59□□□□□ -0.55
ARFGEF1-204ENST00000518290 ZNF518AQ6AHZ1 1483 aa11.58□□□□□ -0.56
ARFGEF1-204ENST00000518290 PLA2R1Q13018 1463 aa11.58□□□□□ -0.56
ARFGEF1-204ENST00000518290 PTPRTO14522 1441 aa11.57□□□□□ -0.56
ARFGEF1-204ENST00000518290 POGZQ7Z3K3 1410 aa11.57□□□□□ -0.56
ARFGEF1-204ENST00000518290 DIP2BQ9P265 1576 aa11.57□□□□□ -0.56
ARFGEF1-204ENST00000518290 EFCAB2Q5VUJ9 269 aa11.57□□□□□ -0.56
ARFGEF1-204ENST00000518290 ADGRL1O94910 1474 aa11.57□□□□□ -0.56
ARFGEF1-204ENST00000518290 ABCA6Q8N139 1617 aa11.56□□□□□ -0.56
ARFGEF1-204ENST00000518290 TSPY4P0CV99 314 aa11.55□□□□□ -0.56
ARFGEF1-204ENST00000518290 TSPY10P0CW01 314 aa11.55□□□□□ -0.56
ARFGEF1-204ENST00000518290 EFCAB6Q5THR3 1501 aa11.55□□□□□ -0.56
ARFGEF1-204ENST00000518290 HNRNPMP52272 730 aaKnown RBP eCLIP11.54□□□□□ -0.56
ARFGEF1-204ENST00000518290 MADDQ8WXG6 1647 aa11.52□□□□□ -0.56
ARFGEF1-204ENST00000518290 DIP2CQ9Y2E4 1556 aa11.52□□□□□ -0.57
ARFGEF1-204ENST00000518290 PIK3C2BO00750 1634 aa11.52□□□□□ -0.57
ARFGEF1-204ENST00000518290 CLTCL1P53675 1640 aa11.52□□□□□ -0.57
ARFGEF1-204ENST00000518290 NUP155O75694 1391 aa11.51□□□□□ -0.57
ARFGEF1-204ENST00000518290 IQGAP1P46940 1657 aa11.51□□□□□ -0.57
ARFGEF1-204ENST00000518290 KIF13AQ9H1H9 1805 aa11.5□□□□□ -0.57
ARFGEF1-204ENST00000518290 SLC4A1APQ9BWU0 796 aaKnown RBP11.5□□□□□ -0.57
ARFGEF1-204ENST00000518290 GPRASP1Q5JY77 1395 aa11.5□□□□□ -0.57
ARFGEF1-204ENST00000518290 DHX29Q7Z478 1369 aaKnown RBP11.5□□□□□ -0.57
ARFGEF1-204ENST00000518290 ZNF777Q9ULD5 760 aaPredicted RBP11.49□□□□□ -0.57
ARFGEF1-204ENST00000518290 CAMSAP1Q5T5Y3 1602 aa11.48□□□□□ -0.57
ARFGEF1-204ENST00000518290 CD109Q6YHK3 1445 aa11.48□□□□□ -0.57
ARFGEF1-204ENST00000518290 TRIM52Q96A61 297 aa11.48□□□□□ -0.57
ARFGEF1-204ENST00000518290 SCAPERQ9BY12 1400 aa11.48□□□□□ -0.57
ARFGEF1-204ENST00000518290 A2MP01023 1474 aa11.48□□□□□ -0.57
ARFGEF1-204ENST00000518290 KIF1BO60333 1816 aa11.47□□□□□ -0.57
ARFGEF1-204ENST00000518290 PRAG1Q86YV5 1406 aa11.47□□□□□ -0.57
ARFGEF1-204ENST00000518290 NEUROD1Q13562 356 aa11.47□□□□□ -0.57
ARFGEF1-204ENST00000518290 L3MBTL2Q969R5 705 aa11.47□□□□□ -0.57
ARFGEF1-204ENST00000518290 NRXN1Q9ULB1 1477 aa11.47□□□□□ -0.57
ARFGEF1-204ENST00000518290 MYO3AQ8NEV4 1616 aa11.46□□□□□ -0.57
ARFGEF1-204ENST00000518290 MYOM2P54296 1465 aa11.46□□□□□ -0.57
ARFGEF1-204ENST00000518290 PKD2Q13563 968 aa11.46□□□□□ -0.57
ARFGEF1-204ENST00000518290 ARID4BQ4LE39 1312 aaPredicted RBP11.46□□□□□ -0.58
ARFGEF1-204ENST00000518290 MROH2AA6NES4 1674 aa11.45□□□□□ -0.58
ARFGEF1-204ENST00000518290 ADGRB3O60242 1522 aa11.45□□□□□ -0.58
ARFGEF1-204ENST00000518290 PPLO60437 1756 aa11.45□□□□□ -0.58
ARFGEF1-204ENST00000518290 AGLP35573 1532 aa11.45□□□□□ -0.58
ARFGEF1-204ENST00000518290 SPAG9O60271 1321 aaKnown RBP11.44□□□□□ -0.58
ARFGEF1-204ENST00000518290 MIER1Q8N108 512 aa11.44□□□□□ -0.58
ARFGEF1-204ENST00000518290 SIGLEC1Q9BZZ2 1709 aa11.44□□□□□ -0.58
ARFGEF1-204ENST00000518290 ABCC3O15438 1527 aa11.44□□□□□ -0.58
ARFGEF1-204ENST00000518290 CCDC144AA2RUR9 1427 aa11.43□□□□□ -0.58
ARFGEF1-204ENST00000518290 ARHGAP31Q2M1Z3 1444 aa11.43□□□□□ -0.58
ARFGEF1-204ENST00000518290 NBPF8Q3BBV2 869 aa11.42□□□□□ -0.58
ARFGEF1-204ENST00000518290 CNTLNQ9NXG0 1405 aa11.42□□□□□ -0.58
ARFGEF1-204ENST00000518290 SETBP1Q9Y6X0 1596 aa11.42□□□□□ -0.58
ARFGEF1-204ENST00000518290 STAC3Q96MF2 364 aa11.41□□□□□ -0.58
ARFGEF1-204ENST00000518290 FOXD1Q16676 465 aa11.4□□□□□ -0.58
ARFGEF1-204ENST00000518290 KCNH8Q96L42 1107 aa11.39□□□□□ -0.59
ARFGEF1-204ENST00000518290 CCDC7Q96M83 1385 aa11.39□□□□□ -0.59
ARFGEF1-204ENST00000518290 CCER2I3L3R5 266 aa11.39□□□□□ -0.59
ARFGEF1-204ENST00000518290 ARHGEF40Q8TER5 1519 aa11.39□□□□□ -0.59
ARFGEF1-204ENST00000518290 SYNMO15061 1565 aa11.38□□□□□ -0.59
ARFGEF1-204ENST00000518290 PREX1Q8TCU6 1659 aa11.38□□□□□ -0.59
ARFGEF1-204ENST00000518290 KDM5AP29375 1690 aaKnown RBP11.37□□□□□ -0.59
ARFGEF1-204ENST00000518290 EIF4G2P78344 907 aaKnown RBP eCLIP11.37□□□□□ -0.59
ARFGEF1-204ENST00000518290 NOS1P29475 1434 aa11.37□□□□□ -0.59
ARFGEF1-204ENST00000518290 HSPA5P11021 654 aaKnown RBP11.37□□□□□ -0.59
ARFGEF1-204ENST00000518290 WASHC2AQ641Q2 1341 aa11.37□□□□□ -0.59
ARFGEF1-204ENST00000518290 KANK1Q14678 1352 aa11.36□□□□□ -0.59
ARFGEF1-204ENST00000518290 NPM1P06748 294 aaKnown RBP eCLIP11.36□□□□□ -0.59
ARFGEF1-204ENST00000518290 AFAP1Q8N556 730 aa11.35□□□□□ -0.59
ARFGEF1-204ENST00000518290 COL17A1Q9UMD9 1497 aaPredicted RBP11.35□□□□□ -0.59
ARFGEF1-204ENST00000518290 MYOM1P52179 1685 aa11.35□□□□□ -0.59
ARFGEF1-204ENST00000518290 USP47Q96K76 1375 aa11.35□□□□□ -0.59
ARFGEF1-204ENST00000518290 ROCK2O75116 1388 aaKnown RBP11.34□□□□□ -0.59
ARFGEF1-204ENST00000518290 NPATQ14207 1427 aa11.32□□□□□ -0.6
ARFGEF1-204ENST00000518290 UGGT1Q9NYU2 1555 aa11.32□□□□□ -0.6
ARFGEF1-204ENST00000518290 TMEM131LA2VDJ0 1609 aa11.31□□□□□ -0.6
ARFGEF1-204ENST00000518290 NEXMIFQ5QGS0 1516 aa11.31□□□□□ -0.6
ARFGEF1-204ENST00000518290 CENPBP07199 599 aaPredicted RBP11.3□□□□□ -0.6
ARFGEF1-204ENST00000518290 SPATA31D1Q6ZQQ2 1576 aa11.3□□□□□ -0.6
ARFGEF1-204ENST00000518290 ADGRB1O14514 1584 aa11.29□□□□□ -0.6
ARFGEF1-204ENST00000518290 ZFYVE9O95405 1425 aa11.29□□□□□ -0.6
ARFGEF1-204ENST00000518290 KTN1Q86UP2 1357 aaKnown RBP11.29□□□□□ -0.6
ARFGEF1-204ENST00000518290 KIF7Q2M1P5 1343 aa11.29□□□□□ -0.6
ARFGEF1-204ENST00000518290 SETD1AO15047 1707 aaKnown RBP11.28□□□□□ -0.6
ARFGEF1-204ENST00000518290 C11orf95C9JLR9 678 aaPredicted RBP11.27□□□□□ -0.61
ARFGEF1-204ENST00000518290 PIK3C2GO75747 1445 aa11.27□□□□□ -0.61
ARFGEF1-204ENST00000518290 SCAF11Q99590 1463 aaKnown RBP11.27□□□□□ -0.61
ARFGEF1-204ENST00000518290 USP32Q8NFA0 1604 aa11.27□□□□□ -0.61
ARFGEF1-204ENST00000518290 TSPOAP1O95153 1857 aa11.26□□□□□ -0.61
ARFGEF1-204ENST00000518290 MYO5BQ9ULV0 1848 aa11.26□□□□□ -0.61
ARFGEF1-204ENST00000518290 YEATS2Q9ULM3 1422 aa11.26□□□□□ -0.61
ARFGEF1-204ENST00000518290 ARHGEF28Q8N1W1 1705 aaKnown RBP11.26□□□□□ -0.61
ARFGEF1-204ENST00000518290 SBNO2Q9Y2G9 1366 aa11.26□□□□□ -0.61
ARFGEF1-204ENST00000518290 PPP6R1Q9UPN7 881 aa11.26□□□□□ -0.61
ARFGEF1-204ENST00000518290 CLTCQ00610 1675 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms