RNA–Protein interactions for RNA: ENST00000516060.1

SCARNA23-201, small Cajal body-specific RNA 23, humanhuman

BASIC

Gene SCARNA23, Length 130 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA23-201ENST00000516060 PPP1R18Q6NYC8 613 aa4.59□□□□□ -1.67
SCARNA23-201ENST00000516060 UPF1Q92900 1129 aaKnown RBP eCLIP4.59□□□□□ -1.67
SCARNA23-201ENST00000516060 PPP1R3GB7ZBB8 358 aa4.58□□□□□ -1.68
SCARNA23-201ENST00000516060 TSR3Q9UJK0 312 aaKnown RBP4.58□□□□□ -1.68
SCARNA23-201ENST00000516060 COL9A1P20849 921 aa4.57□□□□□ -1.68
SCARNA23-201ENST00000516060 TJAP1Q5JTD0 557 aa4.57□□□□□ -1.68
SCARNA23-201ENST00000516060 STK17AQ9UEE5 414 aa4.57□□□□□ -1.68
SCARNA23-201ENST00000516060 MYT1Q01538 1121 aa4.56□□□□□ -1.68
SCARNA23-201ENST00000516060 KIAA1468Q9P260 1216 aa4.56□□□□□ -1.68
SCARNA23-201ENST00000516060 HPS5Q9UPZ3 1129 aa4.56□□□□□ -1.68
SCARNA23-201ENST00000516060 TRIM67Q6ZTA4 783 aa4.54□□□□□ -1.68
SCARNA23-201ENST00000516060 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.54□□□□□ -1.68
SCARNA23-201ENST00000516060 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.54□□□□□ -1.68
SCARNA23-201ENST00000516060 SEPT9Q9UHD8 586 aaPredicted RBP4.54□□□□□ -1.68
SCARNA23-201ENST00000516060 EVI5O60447 810 aa4.53□□□□□ -1.68
SCARNA23-201ENST00000516060 LRCH3Q96II8 777 aa4.53□□□□□ -1.68
SCARNA23-201ENST00000516060 ONECUT3O60422 494 aaPredicted RBP4.52□□□□□ -1.69
SCARNA23-201ENST00000516060 DGAT1O75907 488 aa4.52□□□□□ -1.69
SCARNA23-201ENST00000516060 FAM98CQ17RN3 349 aaKnown RBP4.52□□□□□ -1.69
SCARNA23-201ENST00000516060 PKDCCQ504Y2 493 aa4.52□□□□□ -1.69
SCARNA23-201ENST00000516060 MTRQ99707 1265 aa4.52□□□□□ -1.69
SCARNA23-201ENST00000516060 IL21Q9HBE4 155 aa4.51□□□□□ -1.69
SCARNA23-201ENST00000516060 PCDHGA10Q9Y5H3 936 aa4.51□□□□□ -1.69
SCARNA23-201ENST00000516060 WIPF1O43516 503 aa4.5□□□□□ -1.69
SCARNA23-201ENST00000516060 WFS1O76024 890 aa4.5□□□□□ -1.69
SCARNA23-201ENST00000516060 ZNF516Q92618 1163 aa4.5□□□□□ -1.69
SCARNA23-201ENST00000516060 PPP4CP60510 307 aa4.49□□□□□ -1.69
SCARNA23-201ENST00000516060 INSM1Q01101 510 aaPredicted RBP4.48□□□□□ -1.69
SCARNA23-201ENST00000516060 PPP1R15BQ5SWA1 713 aa4.48□□□□□ -1.69
SCARNA23-201ENST00000516060 NKX2-3Q8TAU0 364 aa4.48□□□□□ -1.69
SCARNA23-201ENST00000516060 TRIM6-TRIM34B2RNG4 842 aa4.47□□□□□ -1.69
SCARNA23-201ENST00000516060 CRISPLD2Q9H0B8 497 aa4.47□□□□□ -1.69
SCARNA23-201ENST00000516060 ST8SIA5O15466 376 aa4.46□□□□□ -1.7
SCARNA23-201ENST00000516060 PRR20EP86478 221 aa4.46□□□□□ -1.7
SCARNA23-201ENST00000516060 PRR20CP86479 221 aa4.46□□□□□ -1.7
SCARNA23-201ENST00000516060 PRR20DP86480 221 aa4.46□□□□□ -1.7
SCARNA23-201ENST00000516060 PRR20BP86481 221 aa4.46□□□□□ -1.7
SCARNA23-201ENST00000516060 PRR20AP86496 221 aa4.46□□□□□ -1.7
SCARNA23-201ENST00000516060 NFX1Q12986 1120 aaKnown RBP4.46□□□□□ -1.7
SCARNA23-201ENST00000516060 FBXW7Q969H0 707 aa4.46□□□□□ -1.7
SCARNA23-201ENST00000516060 EMID1Q96A84 441 aaPredicted RBP4.46□□□□□ -1.7
SCARNA23-201ENST00000516060 GGCXP38435 758 aa4.45□□□□□ -1.7
SCARNA23-201ENST00000516060 SUZ12Q15022 739 aaKnown RBP4.45□□□□□ -1.7
SCARNA23-201ENST00000516060 TYW1BQ6NUM6 668 aa4.45□□□□□ -1.7
SCARNA23-201ENST00000516060 TMUB1Q9BVT8 246 aa4.45□□□□□ -1.7
SCARNA23-201ENST00000516060 AAASQ9NRG9 546 aa4.45□□□□□ -1.7
SCARNA23-201ENST00000516060 FAM187AA6NFU0 413 aa4.44□□□□□ -1.7
SCARNA23-201ENST00000516060 SLC19A1P41440 591 aa4.44□□□□□ -1.7
SCARNA23-201ENST00000516060 C6orf132Q5T0Z8 1188 aa4.44□□□□□ -1.7
SCARNA23-201ENST00000516060 PHF14O94880 888 aa4.43□□□□□ -1.7
SCARNA23-201ENST00000516060 MAP3K9P80192 1104 aa4.43□□□□□ -1.7
SCARNA23-201ENST00000516060 LCE2CQ5TA81 110 aa4.43□□□□□ -1.7
SCARNA23-201ENST00000516060 SPRYD7Q5W111 196 aa4.42□□□□□ -1.7
SCARNA23-201ENST00000516060 SAMD7Q7Z3H4 446 aa4.42□□□□□ -1.7
SCARNA23-201ENST00000516060 ZNF598Q86UK7 904 aaKnown RBP4.42□□□□□ -1.7
SCARNA23-201ENST00000516060 GDF9O60383 454 aa4.41□□□□□ -1.7
SCARNA23-201ENST00000516060 APLP1P51693 650 aa4.41□□□□□ -1.7
SCARNA23-201ENST00000516060 DACH1Q9UI36 760 aa4.41□□□□□ -1.7
SCARNA23-201ENST00000516060 NCKAP5LQ9HCH0 1330 aa4.41□□□□□ -1.7
SCARNA23-201ENST00000516060 RGL2O15211 777 aa4.4□□□□□ -1.71
SCARNA23-201ENST00000516060 TSKSQ9UJT2 592 aa4.4□□□□□ -1.71
SCARNA23-201ENST00000516060 RNF223E7ERA6 249 aa4.39□□□□□ -1.71
SCARNA23-201ENST00000516060 TNFRSF10AO00220 468 aa4.39□□□□□ -1.71
SCARNA23-201ENST00000516060 ECM2O94769 699 aaPredicted RBP4.39□□□□□ -1.71
SCARNA23-201ENST00000516060 PACS2Q86VP3 889 aa4.39□□□□□ -1.71
SCARNA23-201ENST00000516060 GMPR2Q9P2T1 348 aaKnown RBP4.39□□□□□ -1.71
SCARNA23-201ENST00000516060 C11orf95C9JLR9 678 aaPredicted RBP4.38□□□□□ -1.71
SCARNA23-201ENST00000516060 PDE4AP27815 886 aa4.38□□□□□ -1.71
SCARNA23-201ENST00000516060 ZNF697Q5TEC3 545 aa4.38□□□□□ -1.71
SCARNA23-201ENST00000516060 CRIPAKQ8N1N5 446 aa4.38□□□□□ -1.71
SCARNA23-201ENST00000516060 EMILIN3Q9NT22 766 aa4.38□□□□□ -1.71
SCARNA23-201ENST00000516060 SMAPO00193 183 aa4.37□□□□□ -1.71
SCARNA23-201ENST00000516060 COPS2P61201 443 aa4.37□□□□□ -1.71
SCARNA23-201ENST00000516060 LIAT1Q6ZQX7 453 aa4.37□□□□□ -1.71
SCARNA23-201ENST00000516060 EPAS1Q99814 870 aa4.37□□□□□ -1.71
SCARNA23-201ENST00000516060 ZPR1O75312 459 aa4.36□□□□□ -1.71
SCARNA23-201ENST00000516060 FAM181BA6NEQ2 426 aa4.35□□□□□ -1.71
SCARNA23-201ENST00000516060 TERTO14746 1132 aaKnown RBP4.35□□□□□ -1.71
SCARNA23-201ENST00000516060 RBM33Q96EV2 1170 aaKnown RBP4.35□□□□□ -1.71
SCARNA23-201ENST00000516060 C3orf80F5H4A9 247 aa4.34□□□□□ -1.71
SCARNA23-201ENST00000516060 AVPP01185 164 aa4.34□□□□□ -1.71
SCARNA23-201ENST00000516060 LORP23490 312 aaPredicted RBP4.34□□□□□ -1.71
SCARNA23-201ENST00000516060 ANKLE1Q8NAG6 615 aa4.34□□□□□ -1.71
SCARNA23-201ENST00000516060 DDX27Q96GQ7 796 aaKnown RBP4.34□□□□□ -1.71
SCARNA23-201ENST00000516060 PPEF1O14829 653 aaPredicted RBP4.33□□□□□ -1.72
SCARNA23-201ENST00000516060 RNF40O75150 1001 aa4.33□□□□□ -1.72
SCARNA23-201ENST00000516060 LARP6Q9BRS8 491 aaKnown RBP4.33□□□□□ -1.72
SCARNA23-201ENST00000516060 FAM198AQ9UFP1 575 aa4.33□□□□□ -1.72
SCARNA23-201ENST00000516060 AXIN1O15169 862 aa4.32□□□□□ -1.72
SCARNA23-201ENST00000516060 MFSD10Q14728 455 aa4.32□□□□□ -1.72
SCARNA23-201ENST00000516060 PKD2L1Q9P0L9 805 aa4.32□□□□□ -1.72
SCARNA23-201ENST00000516060 PKD2Q13563 968 aa4.31□□□□□ -1.72
SCARNA23-201ENST00000516060 TSR1Q2NL82 804 aaKnown RBP4.31□□□□□ -1.72
SCARNA23-201ENST00000516060 HS6ST3Q8IZP7 471 aa4.31□□□□□ -1.72
SCARNA23-201ENST00000516060 TATDN2Q93075 761 aa4.31□□□□□ -1.72
SCARNA23-201ENST00000516060 CDCA7LQ96GN5 454 aa4.31□□□□□ -1.72
SCARNA23-201ENST00000516060 SNRPBP14678 240 aaKnown RBP4.3□□□□□ -1.72
SCARNA23-201ENST00000516060 SMCPP49901 116 aaPredicted RBP4.3□□□□□ -1.72
SCARNA23-201ENST00000516060 HDGFP51858 240 aaKnown RBP4.3□□□□□ -1.72
SCARNA23-201ENST00000516060 CTC1Q2NKJ3 1217 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms