RNA–Protein interactions for RNA: ENST00000515939.1

RNU4ATAC11P-201, Transcript of RNA, U4atac small nuclear 11, pseudogene, humanhuman

BASIC

Gene RNU4ATAC11P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC11P-201ENST00000515939 MAP3K1Q13233 1512 aa2.1□□□□□ -2.07
RNU4ATAC11P-201ENST00000515939 SYCP2Q9BX26 1530 aa2.1□□□□□ -2.07
RNU4ATAC11P-201ENST00000515939 CHD2O14647 1828 aaKnown RBP2.1□□□□□ -2.07
RNU4ATAC11P-201ENST00000515939 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.1□□□□□ -2.07
RNU4ATAC11P-201ENST00000515939 COL16A1Q07092 1604 aaPredicted RBP2.09□□□□□ -2.07
RNU4ATAC11P-201ENST00000515939 TET3O43151 1660 aa2.09□□□□□ -2.07
RNU4ATAC11P-201ENST00000515939 PKD2Q13563 968 aa2.09□□□□□ -2.07
RNU4ATAC11P-201ENST00000515939 RBM33Q96EV2 1170 aaKnown RBP2.09□□□□□ -2.07
RNU4ATAC11P-201ENST00000515939 PPP6R1Q9UPN7 881 aa2.09□□□□□ -2.07
RNU4ATAC11P-201ENST00000515939 DIP2AQ14689 1571 aa2.09□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 RNF17Q9BXT8 1623 aaKnown RBP2.09□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 NPHP4O75161 1426 aaPredicted RBP2.08□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 CNTLNQ9NXG0 1405 aa2.08□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 A2MP01023 1474 aa2.08□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 ARHGAP23Q9P227 1491 aa2.08□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 BRWD3Q6RI45 1802 aa2.08□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 TIAM1Q13009 1591 aa2.08□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 SETBP1Q9Y6X0 1596 aa2.08□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 PHLPP1O60346 1717 aa2.08□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 FAM135BQ49AJ0 1406 aa2.08□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 MIA2Q96PC5 1412 aa2.08□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 PZPP20742 1482 aa2.07□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 UTRNP46939 3433 aa2.07□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 SYNMO15061 1565 aa2.07□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 MAST1Q9Y2H9 1570 aa2.07□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 PIK3C2BO00750 1634 aa2.07□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 TOM1O60784 492 aa2.07□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 GGT6Q6P531 493 aa2.07□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 FAM9AQ8IZU1 332 aaPredicted RBP2.07□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 EHMT2Q96KQ7 1210 aa2.07□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.07□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 SCAF1Q9H7N4 1312 aaKnown RBP2.07□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 DHX29Q7Z478 1369 aaKnown RBP2.07□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 TNRQ92752 1358 aa2.07□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 CASKIN1Q8WXD9 1431 aa2.07□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 KIAA1107Q9UPP5 1409 aa2.07□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 ABCC3O15438 1527 aa2.07□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 SLIT1O75093 1534 aa2.07□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 NWD1Q149M9 1564 aa2.06□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 UGGT1Q9NYU2 1555 aa2.06□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 SHPRHQ149N8 1683 aa2.06□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 CEP350Q5VT06 3117 aa2.06□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 SPAG9O60271 1321 aaKnown RBP2.06□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 ERVK-7P63135 1459 aa2.06□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 NHSL1Q5SYE7 1610 aa2.06□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 KDM5AP29375 1690 aaKnown RBP2.06□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 KIF3BO15066 747 aa2.05□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 ANKLE2Q86XL3 938 aa2.05□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 ZNF777Q9ULD5 760 aaPredicted RBP2.05□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 ATP1B4Q9UN42 357 aaPredicted RBP2.05□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 TMEM94Q12767 1356 aa2.05□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 RTEL1-TNFRSF6BF6WH68 1400 aa2.05□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 RGS12O14924 1447 aa2.05□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 FMN1Q68DA7 1419 aa2.05□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 PTPRUQ92729 1446 aa2.05□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 CAMSAP2Q08AD1 1489 aa2.05□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 PLEKHH2Q8IVE3 1493 aa2.05□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 NLRP1Q9C000 1473 aa2.05□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 KDM5DQ9BY66 1539 aa2.05□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 NRXN3Q9Y4C0 1643 aa2.05□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 RGPD8O14715 1765 aaPredicted RBP2.04□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 PRDM15P57071 1507 aaPredicted RBP2.04□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 ARHGEF5Q12774 1597 aa2.04□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 AHDC1Q5TGY3 1603 aaPredicted RBP2.04□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 THEMISQ8N1K5 641 aaPredicted RBP2.04□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 DDX17Q92841 729 aaKnown RBP2.04□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 TRIM52Q96A61 297 aa2.04□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 SLC26A8Q96RN1 970 aa2.04□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 SCAF11Q99590 1463 aaKnown RBP2.04□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 PHF23Q9BUL5 403 aaPredicted RBP2.04□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 MYT1LQ9UL68 1186 aa2.04□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 MARF1Q9Y4F3 1742 aaKnown RBP2.04□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 NALCNQ8IZF0 1738 aa2.03□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 GCC2Q8IWJ2 1684 aa2.03□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 TMEM131LA2VDJ0 1609 aa2.03□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 LAMC1P11047 1609 aa2.03□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 EIF2AK4Q9P2K8 1649 aaKnown RBP2.03□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 FAM135AQ9P2D6 1515 aa2.03□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 CCDC18Q5T9S5 1454 aa2.03□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 FYCO1Q9BQS8 1478 aa2.03□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 CDK12Q9NYV4 1490 aaPredicted RBP2.03□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 ZFYVE9O95405 1425 aa2.03□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 NOS1P29475 1434 aa2.03□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 ADAMTS13Q76LX8 1427 aa2.03□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 TMEM2Q9UHN6 1383 aa2.03□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 KCNA6P17658 529 aa2.03□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 IDI1Q13907 227 aa2.03□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 TXNDC2Q86VQ3 553 aa2.03□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 SLAIN2Q9P270 581 aa2.03□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 CFDP1Q9UEE9 299 aaPredicted RBP2.03□□□□□ -2.08
RNU4ATAC11P-201ENST00000515939 XRN1Q8IZH2 1706 aaKnown RBP2.03□□□□□ -2.09
RNU4ATAC11P-201ENST00000515939 CROCC2H7BZ55 1655 aa2.02□□□□□ -2.09
RNU4ATAC11P-201ENST00000515939 GOLGB1Q14789 3259 aaKnown RBP2.02□□□□□ -2.09
RNU4ATAC11P-201ENST00000515939 GLI3P10071 1580 aa2.02□□□□□ -2.09
RNU4ATAC11P-201ENST00000515939 CCDC141Q6ZP82 1450 aa2.02□□□□□ -2.09
RNU4ATAC11P-201ENST00000515939 BCL9LQ86UU0 1499 aa2.02□□□□□ -2.09
RNU4ATAC11P-201ENST00000515939 CLIP1P30622 1438 aa2.02□□□□□ -2.09
RNU4ATAC11P-201ENST00000515939 EEA1Q15075 1411 aa2.02□□□□□ -2.09
RNU4ATAC11P-201ENST00000515939 ARHGAP31Q2M1Z3 1444 aa2.02□□□□□ -2.09
RNU4ATAC11P-201ENST00000515939 JCADQ9P266 1359 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms