RNA–Protein interactions for RNA: ENST00000515885.5

LINC00461-216, long intergenic non-protein coding RNA 461, humanhuman

TSL 5

Gene LINC00461, Length 719 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00461-216ENST00000515885 RANGAP1P46060 587 aaPredicted RBP12.86□□□□□ -0.35
LINC00461-216ENST00000515885 CYB5RLQ6IPT4 315 aa12.86□□□□□ -0.35
LINC00461-216ENST00000515885 PDCD7Q8N8D1 485 aaKnown RBP12.86□□□□□ -0.35
LINC00461-216ENST00000515885 CLUAP1Q96AJ1 413 aa12.86□□□□□ -0.35
LINC00461-216ENST00000515885 ARHGEF11O15085 1522 aa12.86□□□□□ -0.35
LINC00461-216ENST00000515885 A6NJR5 290 aa12.85□□□□□ -0.35
LINC00461-216ENST00000515885 PTGER2P43116 358 aa12.85□□□□□ -0.35
LINC00461-216ENST00000515885 PRIM1P49642 420 aaKnown RBP12.85□□□□□ -0.35
LINC00461-216ENST00000515885 GIGYF2Q6Y7W6 1299 aaKnown RBP12.84□□□□□ -0.35
LINC00461-216ENST00000515885 WIZO95785 1651 aa12.83□□□□□ -0.35
LINC00461-216ENST00000515885 DDX12PQ92771 950 aa12.83□□□□□ -0.36
LINC00461-216ENST00000515885 UPF1Q92900 1129 aaKnown RBP eCLIP12.83□□□□□ -0.36
LINC00461-216ENST00000515885 REPIN1Q9BWE0 567 aaKnown RBP12.83□□□□□ -0.36
LINC00461-216ENST00000515885 TMEM121BQ9BXQ6 578 aaPredicted RBP12.83□□□□□ -0.36
LINC00461-216ENST00000515885 TRAK2O60296 914 aa12.82□□□□□ -0.36
LINC00461-216ENST00000515885 PCMTD1Q96MG8 357 aaPredicted RBP12.81□□□□□ -0.36
LINC00461-216ENST00000515885 PTGDRQ13258 359 aa12.8□□□□□ -0.36
LINC00461-216ENST00000515885 CCDC82Q8N4S0 544 aa12.8□□□□□ -0.36
LINC00461-216ENST00000515885 URB2Q14146 1524 aaKnown RBP12.79□□□□□ -0.36
LINC00461-216ENST00000515885 OXER1Q8TDS5 423 aa12.79□□□□□ -0.36
LINC00461-216ENST00000515885 BOLA1Q9Y3E2 137 aa12.77□□□□□ -0.37
LINC00461-216ENST00000515885 C19orf67A6NJJ6 358 aa12.76□□□□□ -0.37
LINC00461-216ENST00000515885 MCM6Q14566 821 aa12.76□□□□□ -0.37
LINC00461-216ENST00000515885 CFTRP13569 1480 aa12.75□□□□□ -0.37
LINC00461-216ENST00000515885 SH3D19Q5HYK7 790 aa12.75□□□□□ -0.37
LINC00461-216ENST00000515885 PDIA4P13667 645 aaKnown RBP12.74□□□□□ -0.37
LINC00461-216ENST00000515885 NPM2Q86SE8 214 aaKnown RBP12.74□□□□□ -0.37
LINC00461-216ENST00000515885 TMUB1Q9BVT8 246 aa12.74□□□□□ -0.37
LINC00461-216ENST00000515885 IRX5P78411 483 aaPredicted RBP12.73□□□□□ -0.37
LINC00461-216ENST00000515885 ZNF608Q9ULD9 1512 aaPredicted RBP12.72□□□□□ -0.37
LINC00461-216ENST00000515885 TMEM92Q6UXU6 159 aa12.72□□□□□ -0.37
LINC00461-216ENST00000515885 GALR2O43603 387 aaPredicted RBP12.71□□□□□ -0.37
LINC00461-216ENST00000515885 NECTIN2Q92692 538 aa12.71□□□□□ -0.37
LINC00461-216ENST00000515885 IFT140Q96RY7 1462 aa12.71□□□□□ -0.38
LINC00461-216ENST00000515885 CHD1O14646 1710 aa12.71□□□□□ -0.38
LINC00461-216ENST00000515885 PRDM2Q13029 1718 aa12.71□□□□□ -0.38
LINC00461-216ENST00000515885 EVI5O60447 810 aa12.7□□□□□ -0.38
LINC00461-216ENST00000515885 ARAP1Q96P48 1450 aa12.68□□□□□ -0.38
LINC00461-216ENST00000515885 TBC1D12O60347 775 aa12.68□□□□□ -0.38
LINC00461-216ENST00000515885 OCEL1Q9H607 264 aa12.68□□□□□ -0.38
LINC00461-216ENST00000515885 CDHR5Q9HBB8 845 aa12.68□□□□□ -0.38
LINC00461-216ENST00000515885 ATN1P54259 1190 aaPredicted RBP12.67□□□□□ -0.38
LINC00461-216ENST00000515885 NPDC1Q9NQX5 325 aaPredicted RBP12.67□□□□□ -0.38
LINC00461-216ENST00000515885 EIF4G3O43432 1585 aaKnown RBP12.66□□□□□ -0.38
LINC00461-216ENST00000515885 ZBTB7CA1YPR0 619 aa12.66□□□□□ -0.38
LINC00461-216ENST00000515885 CLCN1P35523 988 aa12.66□□□□□ -0.38
LINC00461-216ENST00000515885 SKIV2LQ15477 1246 aaKnown RBP12.66□□□□□ -0.38
LINC00461-216ENST00000515885 PROSER2Q86WR7 435 aaPredicted RBP12.66□□□□□ -0.38
LINC00461-216ENST00000515885 PHOX2BQ99453 314 aa12.66□□□□□ -0.38
LINC00461-216ENST00000515885 ZNF777Q9ULD5 760 aaPredicted RBP12.66□□□□□ -0.38
LINC00461-216ENST00000515885 G3V3G9 751 aa12.65□□□□□ -0.38
LINC00461-216ENST00000515885 MDM2Q00987 491 aaPredicted RBP12.65□□□□□ -0.38
LINC00461-216ENST00000515885 FNBP4Q8N3X1 1017 aaPredicted RBP12.65□□□□□ -0.38
LINC00461-216ENST00000515885 POM121Q96HA1 1249 aa12.65□□□□□ -0.38
LINC00461-216ENST00000515885 GPCPD1Q9NPB8 672 aa12.65□□□□□ -0.38
LINC00461-216ENST00000515885 SSTR3P32745 418 aaPredicted RBP12.63□□□□□ -0.39
LINC00461-216ENST00000515885 PROCA1Q8NCQ7 364 aaPredicted RBP12.63□□□□□ -0.39
LINC00461-216ENST00000515885 RSF1Q96T23 1441 aaPredicted RBP12.61□□□□□ -0.39
LINC00461-216ENST00000515885 TOPBP1Q92547 1522 aa12.6□□□□□ -0.39
LINC00461-216ENST00000515885 TOP2AP11388 1531 aaKnown RBP12.59□□□□□ -0.39
LINC00461-216ENST00000515885 EN1Q05925 392 aaPredicted RBP12.59□□□□□ -0.39
LINC00461-216ENST00000515885 IER5LQ5T953 404 aa12.59□□□□□ -0.39
LINC00461-216ENST00000515885 BEGAINQ9BUH8 593 aa12.59□□□□□ -0.39
LINC00461-216ENST00000515885 ANO8Q9HCE9 1232 aaPredicted RBP12.59□□□□□ -0.39
LINC00461-216ENST00000515885 ATMINO43313 823 aaPredicted RBP12.57□□□□□ -0.4
LINC00461-216ENST00000515885 PTCD2Q8WV60 388 aaKnown RBP12.57□□□□□ -0.4
LINC00461-216ENST00000515885 CCDC9Q9Y3X0 531 aaKnown RBP12.57□□□□□ -0.4
LINC00461-216ENST00000515885 AQRO60306 1485 aaKnown RBP eCLIP12.57□□□□□ -0.4
LINC00461-216ENST00000515885 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.56□□□□□ -0.4
LINC00461-216ENST00000515885 POLR3EQ9NVU0 708 aa12.56□□□□□ -0.4
LINC00461-216ENST00000515885 ABCC8Q09428 1581 aa12.56□□□□□ -0.4
LINC00461-216ENST00000515885 RAD21O60216 631 aa12.55□□□□□ -0.4
LINC00461-216ENST00000515885 L3MBTL3Q96JM7 780 aaPredicted RBP12.55□□□□□ -0.4
LINC00461-216ENST00000515885 FAM217BQ9NTX9 383 aaPredicted RBP12.55□□□□□ -0.4
LINC00461-216ENST00000515885 MAP3K7O43318 606 aa12.54□□□□□ -0.4
LINC00461-216ENST00000515885 PHF14O94880 888 aa12.54□□□□□ -0.4
LINC00461-216ENST00000515885 SERPINA10Q9UK55 444 aa12.54□□□□□ -0.4
LINC00461-216ENST00000515885 PLCG2P16885 1265 aa12.53□□□□□ -0.4
LINC00461-216ENST00000515885 ASTLQ6HA08 431 aaPredicted RBP12.53□□□□□ -0.4
LINC00461-216ENST00000515885 CCDC97Q96F63 343 aaPredicted RBP12.53□□□□□ -0.4
LINC00461-216ENST00000515885 EPAS1Q99814 870 aa12.53□□□□□ -0.4
LINC00461-216ENST00000515885 TRAIPQ9BWF2 469 aa12.53□□□□□ -0.4
LINC00461-216ENST00000515885 COG6Q9Y2V7 657 aa12.53□□□□□ -0.4
LINC00461-216ENST00000515885 SPDYE5A6NIY4 337 aa12.52□□□□□ -0.41
LINC00461-216ENST00000515885 TSR1Q2NL82 804 aaKnown RBP12.52□□□□□ -0.41
LINC00461-216ENST00000515885 FAM161AQ3B820 660 aa12.52□□□□□ -0.41
LINC00461-216ENST00000515885 MYSM1Q5VVJ2 828 aa12.52□□□□□ -0.41
LINC00461-216ENST00000515885 NLRP7Q8WX94 980 aa12.52□□□□□ -0.41
LINC00461-216ENST00000515885 RBM33Q96EV2 1170 aaKnown RBP12.52□□□□□ -0.41
LINC00461-216ENST00000515885 ATP1B4Q9UN42 357 aaPredicted RBP12.52□□□□□ -0.41
LINC00461-216ENST00000515885 DNMBPQ6XZF7 1577 aa12.52□□□□□ -0.41
LINC00461-216ENST00000515885 METTL3Q86U44 580 aaKnown RBP12.5□□□□□ -0.41
LINC00461-216ENST00000515885 PLSCR2Q9NRY7 297 aa12.5□□□□□ -0.41
LINC00461-216ENST00000515885 TARBP1Q13395 1621 aaKnown RBP12.5□□□□□ -0.41
LINC00461-216ENST00000515885 SNRKQ9NRH2 765 aa12.49□□□□□ -0.41
LINC00461-216ENST00000515885 PCDHGA10Q9Y5H3 936 aa12.49□□□□□ -0.41
LINC00461-216ENST00000515885 FBXO31Q5XUX0 539 aaPredicted RBP12.48□□□□□ -0.41
LINC00461-216ENST00000515885 CHMP7Q8WUX9 453 aaPredicted RBP12.48□□□□□ -0.41
LINC00461-216ENST00000515885 SYNJ1O43426 1573 aa12.47□□□□□ -0.41
LINC00461-216ENST00000515885 CLK2P49760 499 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms