RNA–Protein interactions for RNA: ENST00000515708.5

TSPAN17-209, Transcript of tetraspanin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN17, Length 2,361 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-209ENST00000515708 KTN1Q86UP2 1357 aaKnown RBP22.67■■□□□ 1.22
TSPAN17-209ENST00000515708 E9PCH4 1651 aa22.67■■□□□ 1.22
TSPAN17-209ENST00000515708 BRD4O60885 1362 aaPredicted RBP22.67■■□□□ 1.22
TSPAN17-209ENST00000515708 SENP3-EIF4A1A0A087X0R7 540 aa22.67■■□□□ 1.22
TSPAN17-209ENST00000515708 DCAF11Q8TEB1 546 aa22.67■■□□□ 1.22
TSPAN17-209ENST00000515708 ARHGEF5Q12774 1597 aa22.66■■□□□ 1.22
TSPAN17-209ENST00000515708 MYBBP1AQ9BQG0 1328 aaKnown RBP22.66■■□□□ 1.22
TSPAN17-209ENST00000515708 RALBP1Q15311 655 aa22.64■■□□□ 1.22
TSPAN17-209ENST00000515708 CHD1O14646 1710 aa22.64■■□□□ 1.21
TSPAN17-209ENST00000515708 HNRNPMP52272 730 aaKnown RBP eCLIP22.63■■□□□ 1.21
TSPAN17-209ENST00000515708 FAM135AQ9P2D6 1515 aa22.61■■□□□ 1.21
TSPAN17-209ENST00000515708 CCDC141Q6ZP82 1450 aa22.58■■□□□ 1.21
TSPAN17-209ENST00000515708 NOP58Q9Y2X3 529 aaKnown RBP22.57■■□□□ 1.2
TSPAN17-209ENST00000515708 TRPM1Q7Z4N2 1603 aa22.57■■□□□ 1.2
TSPAN17-209ENST00000515708 SAMD9LQ8IVG5 1584 aa22.57■■□□□ 1.2
TSPAN17-209ENST00000515708 PRAG1Q86YV5 1406 aa22.57■■□□□ 1.2
TSPAN17-209ENST00000515708 MYT1LQ9UL68 1186 aa22.55■■□□□ 1.2
TSPAN17-209ENST00000515708 CDC42BPBQ9Y5S2 1711 aa22.55■■□□□ 1.2
TSPAN17-209ENST00000515708 PREX2Q70Z35 1606 aa22.54■■□□□ 1.2
TSPAN17-209ENST00000515708 CCDC144AA2RUR9 1427 aa22.54■■□□□ 1.2
TSPAN17-209ENST00000515708 PARD3Q8TEW0 1356 aa22.54■■□□□ 1.2
TSPAN17-209ENST00000515708 NLRP13Q86W25 1043 aa22.53■■□□□ 1.2
TSPAN17-209ENST00000515708 RRP1P56182 461 aaKnown RBP22.52■■□□□ 1.19
TSPAN17-209ENST00000515708 RSPH4AQ5TD94 716 aa22.5■■□□□ 1.19
TSPAN17-209ENST00000515708 PAK3O75914 559 aaPredicted RBP22.5■■□□□ 1.19
TSPAN17-209ENST00000515708 GPRASP1Q5JY77 1395 aa22.49■■□□□ 1.19
TSPAN17-209ENST00000515708 PLA2R1Q13018 1463 aa22.48■■□□□ 1.19
TSPAN17-209ENST00000515708 PER1O15534 1290 aaPredicted RBP22.48■■□□□ 1.19
TSPAN17-209ENST00000515708 ANP32AP39687 249 aaKnown RBP22.48■■□□□ 1.19
TSPAN17-209ENST00000515708 NBPF1Q3BBV0 1214 aa22.48■■□□□ 1.19
TSPAN17-209ENST00000515708 UNC13BO14795 1591 aa22.48■■□□□ 1.19
TSPAN17-209ENST00000515708 RCAN3Q9UKA8 241 aa22.47■■□□□ 1.19
TSPAN17-209ENST00000515708 ERCC6L2Q5T890 1561 aa22.47■■□□□ 1.19
TSPAN17-209ENST00000515708 A2MP01023 1474 aa22.46■■□□□ 1.19
TSPAN17-209ENST00000515708 PDE3BQ13370 1112 aa22.46■■□□□ 1.19
TSPAN17-209ENST00000515708 RGL3Q3MIN7 710 aa22.46■■□□□ 1.19
TSPAN17-209ENST00000515708 COL17A1Q9UMD9 1497 aaPredicted RBP22.46■■□□□ 1.19
TSPAN17-209ENST00000515708 SYCP2Q9BX26 1530 aa22.46■■□□□ 1.19
TSPAN17-209ENST00000515708 LAMC1P11047 1609 aa22.45■■□□□ 1.19
TSPAN17-209ENST00000515708 IPO9Q96P70 1041 aaKnown RBP22.45■■□□□ 1.18
TSPAN17-209ENST00000515708 MAST1Q9Y2H9 1570 aa22.45■■□□□ 1.18
TSPAN17-209ENST00000515708 PRDM15P57071 1507 aaPredicted RBP22.44■■□□□ 1.18
TSPAN17-209ENST00000515708 EXOC6Q8TAG9 804 aa22.44■■□□□ 1.18
TSPAN17-209ENST00000515708 SALL2Q9Y467 1007 aaPredicted RBP22.44■■□□□ 1.18
TSPAN17-209ENST00000515708 SHROOM2Q13796 1616 aa22.44■■□□□ 1.18
TSPAN17-209ENST00000515708 WASHC2CQ9Y4E1 1318 aa22.42■■□□□ 1.18
TSPAN17-209ENST00000515708 TESK2Q96S53 571 aa22.41■■□□□ 1.18
TSPAN17-209ENST00000515708 DISP3Q9P2K9 1392 aa22.41■■□□□ 1.18
TSPAN17-209ENST00000515708 IQGAP3Q86VI3 1631 aa22.4■■□□□ 1.18
TSPAN17-209ENST00000515708 MYO5CQ9NQX4 1742 aa22.4■■□□□ 1.18
TSPAN17-209ENST00000515708 TTC37Q6PGP7 1564 aa22.4■■□□□ 1.18
TSPAN17-209ENST00000515708 ARHGAP5Q13017 1502 aa22.4■■□□□ 1.18
TSPAN17-209ENST00000515708 EIF2AK4Q9P2K8 1649 aaKnown RBP22.39■■□□□ 1.17
TSPAN17-209ENST00000515708 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.39■■□□□ 1.17
TSPAN17-209ENST00000515708 PLXNC1O60486 1568 aa22.38■■□□□ 1.17
TSPAN17-209ENST00000515708 DEKP35659 375 aaKnown RBP22.38■■□□□ 1.17
TSPAN17-209ENST00000515708 INSRP06213 1382 aa22.38■■□□□ 1.17
TSPAN17-209ENST00000515708 ZMYM4Q5VZL5 1548 aa22.37■■□□□ 1.17
TSPAN17-209ENST00000515708 NBR1Q14596 966 aa22.37■■□□□ 1.17
TSPAN17-209ENST00000515708 ERBINQ96RT1 1412 aa22.37■■□□□ 1.17
TSPAN17-209ENST00000515708 CC2D1BQ5T0F9 858 aaKnown RBP22.36■■□□□ 1.17
TSPAN17-209ENST00000515708 CDCA7LQ96GN5 454 aa22.36■■□□□ 1.17
TSPAN17-209ENST00000515708 BLMP54132 1417 aaPredicted RBP22.36■■□□□ 1.17
TSPAN17-209ENST00000515708 PLEKHH2Q8IVE3 1493 aa22.36■■□□□ 1.17
TSPAN17-209ENST00000515708 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.36■■□□□ 1.172e-6■■■■■ 51.7
TSPAN17-209ENST00000515708 TCERG1O14776 1098 aaKnown RBP22.35■■□□□ 1.17
TSPAN17-209ENST00000515708 ZBTB47Q9UFB7 747 aaPredicted RBP22.35■■□□□ 1.17
TSPAN17-209ENST00000515708 ATP10AO60312 1499 aa22.34■■□□□ 1.17
TSPAN17-209ENST00000515708 PANK3Q9H999 370 aa22.34■■□□□ 1.17
TSPAN17-209ENST00000515708 CLASP1Q7Z460 1538 aa22.34■■□□□ 1.17
TSPAN17-209ENST00000515708 TMF1P82094 1093 aa22.32■■□□□ 1.16
TSPAN17-209ENST00000515708 MAGI2Q86UL8 1455 aa22.32■■□□□ 1.16
TSPAN17-209ENST00000515708 DUOX2Q9NRD8 1548 aa22.31■■□□□ 1.16
TSPAN17-209ENST00000515708 RNF17Q9BXT8 1623 aaKnown RBP22.29■■□□□ 1.16
TSPAN17-209ENST00000515708 PDE4AP27815 886 aa22.27■■□□□ 1.16
TSPAN17-209ENST00000515708 MS4A1P11836 297 aa22.26■■□□□ 1.15
TSPAN17-209ENST00000515708 PLIN1O60240 522 aa22.25■■□□□ 1.15
TSPAN17-209ENST00000515708 BACH2Q9BYV9 841 aa22.25■■□□□ 1.15
TSPAN17-209ENST00000515708 ABCC2Q92887 1545 aa22.24■■□□□ 1.15
TSPAN17-209ENST00000515708 NPM2Q86SE8 214 aaKnown RBP22.23■■□□□ 1.15
TSPAN17-209ENST00000515708 WDR7Q9Y4E6 1490 aa22.22■■□□□ 1.15
TSPAN17-209ENST00000515708 CRBNQ96SW2 442 aa22.21■■□□□ 1.15
TSPAN17-209ENST00000515708 RTL5Q5HYW3 569 aaPredicted RBP22.2■■□□□ 1.14
TSPAN17-209ENST00000515708 ADAMTS8Q9UP79 889 aa22.2■■□□□ 1.14
TSPAN17-209ENST00000515708 MADDQ8WXG6 1647 aa22.19■■□□□ 1.14
TSPAN17-209ENST00000515708 IQGAP1P46940 1657 aa22.19■■□□□ 1.14
TSPAN17-209ENST00000515708 PLCH2O75038 1416 aa22.17■■□□□ 1.14
TSPAN17-209ENST00000515708 KNSTRNQ9Y448 316 aa22.16■■□□□ 1.14
TSPAN17-209ENST00000515708 PPP2R1AP30153 589 aa22.16■■□□□ 1.14
TSPAN17-209ENST00000515708 ABCC1P33527 1531 aa22.14■■□□□ 1.13
TSPAN17-209ENST00000515708 AMER1Q5JTC6 1135 aaPredicted RBP22.13■■□□□ 1.13
TSPAN17-209ENST00000515708 PLEKHH1Q9ULM0 1364 aa22.13■■□□□ 1.13
TSPAN17-209ENST00000515708 SYNMO15061 1565 aa22.13■■□□□ 1.13
TSPAN17-209ENST00000515708 C20orf194Q5TEA3 1177 aa22.13■■□□□ 1.13
TSPAN17-209ENST00000515708 EFCAB2Q5VUJ9 269 aa22.12■■□□□ 1.13
TSPAN17-209ENST00000515708 SPHKAPQ2M3C7 1700 aa22.12■■□□□ 1.13
TSPAN17-209ENST00000515708 TRAPPC8Q9Y2L5 1435 aa22.12■■□□□ 1.13
TSPAN17-209ENST00000515708 TRPM2O94759 1503 aa22.12■■□□□ 1.13
TSPAN17-209ENST00000515708 WDR43Q15061 677 aaKnown RBP eCLIP22.12■■□□□ 1.13
TSPAN17-209ENST00000515708 SCAF11Q99590 1463 aaKnown RBP22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms