RNA–Protein interactions for RNA: ENST00000515393.5

MCTP1-218, Transcript of multiple C2 and transmembrane domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCTP1, Length 5,396 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCTP1-218ENST00000515393 SKOR2Q2VWA4 1001 aaPredicted RBP23.36■■□□□ 1.33
MCTP1-218ENST00000515393 RUSC2Q8N2Y8 1516 aa23.36■■□□□ 1.33
MCTP1-218ENST00000515393 SLKQ9H2G2 1235 aaPredicted RBP23.36■■□□□ 1.33
MCTP1-218ENST00000515393 ST18O60284 1047 aa23.36■■□□□ 1.33
MCTP1-218ENST00000515393 MFAP1P55081 439 aaKnown RBP23.36■■□□□ 1.33
MCTP1-218ENST00000515393 HNRNPMP52272 730 aaKnown RBP eCLIP23.35■■□□□ 1.33
MCTP1-218ENST00000515393 STK26Q9P289 416 aa23.35■■□□□ 1.33
MCTP1-218ENST00000515393 MIA2Q96PC5 1412 aa23.35■■□□□ 1.33
MCTP1-218ENST00000515393 KIF3BO15066 747 aa23.35■■□□□ 1.33
MCTP1-218ENST00000515393 CCDC34Q96HJ3 373 aa23.35■■□□□ 1.33
MCTP1-218ENST00000515393 CHMP4CQ96CF2 233 aa23.34■■□□□ 1.33
MCTP1-218ENST00000515393 FGD6Q6ZV73 1430 aa23.34■■□□□ 1.33
MCTP1-218ENST00000515393 SAFB2Q14151 953 aaKnown RBP eCLIP23.33■■□□□ 1.33
MCTP1-218ENST00000515393 PDE4AP27815 886 aa23.32■■□□□ 1.32
MCTP1-218ENST00000515393 GNL2Q13823 731 aaKnown RBP23.32■■□□□ 1.32
MCTP1-218ENST00000515393 ST20-MTHFSA0A0A6YYL1 179 aa23.32■■□□□ 1.32
MCTP1-218ENST00000515393 PANK3Q9H999 370 aa23.3■■□□□ 1.32
MCTP1-218ENST00000515393 CNTLNQ9NXG0 1405 aa23.29■■□□□ 1.32
MCTP1-218ENST00000515393 KIF3AQ9Y496 699 aa23.29■■□□□ 1.32
MCTP1-218ENST00000515393 FYCO1Q9BQS8 1478 aa23.28■■□□□ 1.32
MCTP1-218ENST00000515393 JPH4Q96JJ6 628 aa23.28■■□□□ 1.32
MCTP1-218ENST00000515393 LRRC9Q6ZRR7 1453 aa23.27■■□□□ 1.32
MCTP1-218ENST00000515393 ZKSCAN2Q63HK3 967 aa23.27■■□□□ 1.32
MCTP1-218ENST00000515393 NPHP1O15259 732 aa23.26■■□□□ 1.31
MCTP1-218ENST00000515393 CASKIN1Q8WXD9 1431 aa23.25■■□□□ 1.31
MCTP1-218ENST00000515393 EVC2Q86UK5 1308 aa23.25■■□□□ 1.31
MCTP1-218ENST00000515393 IGF1RP08069 1367 aa23.25■■□□□ 1.31
MCTP1-218ENST00000515393 CCDC7Q96M83 1385 aa23.25■■□□□ 1.31
MCTP1-218ENST00000515393 CCDC146Q8IYE0 955 aa23.24■■□□□ 1.31
MCTP1-218ENST00000515393 WASHC2CQ9Y4E1 1318 aa23.23■■□□□ 1.31
MCTP1-218ENST00000515393 RSPH6AQ9H0K4 717 aa23.23■■□□□ 1.31
MCTP1-218ENST00000515393 FGD5Q6ZNL6 1462 aa23.23■■□□□ 1.31
MCTP1-218ENST00000515393 GZF1Q9H116 711 aaPredicted RBP23.22■■□□□ 1.31
MCTP1-218ENST00000515393 VGFO15240 615 aaPredicted RBP23.22■■□□□ 1.31
MCTP1-218ENST00000515393 ATP6V1DQ9Y5K8 247 aa23.22■■□□□ 1.31
MCTP1-218ENST00000515393 RRBP1Q9P2E9 1410 aaKnown RBP23.22■■□□□ 1.31
MCTP1-218ENST00000515393 APBB1O00213 710 aa23.21■■□□□ 1.31
MCTP1-218ENST00000515393 GAPVD1Q14C86 1478 aa23.2■■□□□ 1.3
MCTP1-218ENST00000515393 GSE1Q14687 1217 aa23.2■■□□□ 1.3
MCTP1-218ENST00000515393 ROCK1Q13464 1354 aa23.2■■□□□ 1.3
MCTP1-218ENST00000515393 TRIM6-TRIM34B2RNG4 842 aa23.19■■□□□ 1.3
MCTP1-218ENST00000515393 DDX19BQ9UMR2 479 aa23.19■■□□□ 1.3
MCTP1-218ENST00000515393 SOX12O15370 315 aa23.18■■□□□ 1.3
MCTP1-218ENST00000515393 EID1Q9Y6B2 187 aa23.18■■□□□ 1.3
MCTP1-218ENST00000515393 BRD4O60885 1362 aaPredicted RBP23.18■■□□□ 1.3
MCTP1-218ENST00000515393 PTPRGP23470 1445 aa23.18■■□□□ 1.3
MCTP1-218ENST00000515393 MLECQ14165 292 aa23.18■■□□□ 1.3
MCTP1-218ENST00000515393 KIF16BQ96L93 1317 aa23.18■■□□□ 1.3
MCTP1-218ENST00000515393 EXOC6Q8TAG9 804 aa23.17■■□□□ 1.3
MCTP1-218ENST00000515393 EFCAB5A4FU69 1503 aa23.16■■□□□ 1.3
MCTP1-218ENST00000515393 CLUAP1Q96AJ1 413 aa23.16■■□□□ 1.3
MCTP1-218ENST00000515393 CRBNQ96SW2 442 aa23.16■■□□□ 1.3
MCTP1-218ENST00000515393 NCAPD3P42695 1498 aa23.11■■□□□ 1.29
MCTP1-218ENST00000515393 API5Q9BZZ5 524 aaKnown RBP23.11■■□□□ 1.29
MCTP1-218ENST00000515393 REC8O95072 547 aa23.11■■□□□ 1.29
MCTP1-218ENST00000515393 WASHC2AQ641Q2 1341 aa23.11■■□□□ 1.29
MCTP1-218ENST00000515393 HSP90B1P14625 803 aaKnown RBP23.1■■□□□ 1.29
MCTP1-218ENST00000515393 PAK3O75914 559 aaPredicted RBP23.09■■□□□ 1.29
MCTP1-218ENST00000515393 GORABQ5T7V8 394 aa23.09■■□□□ 1.29
MCTP1-218ENST00000515393 NCOA2Q15596 1464 aa23.09■■□□□ 1.29
MCTP1-218ENST00000515393 KIF7Q2M1P5 1343 aa23.09■■□□□ 1.29
MCTP1-218ENST00000515393 AMPHP49418 695 aa23.09■■□□□ 1.29
MCTP1-218ENST00000515393 TRAK1Q9UPV9 953 aa23.09■■□□□ 1.29
MCTP1-218ENST00000515393 COG3Q96JB2 828 aa23.08■■□□□ 1.28
MCTP1-218ENST00000515393 RUNDC1Q96C34 613 aa23.08■■□□□ 1.28
MCTP1-218ENST00000515393 CHMP5Q9NZZ3 219 aa23.08■■□□□ 1.28
MCTP1-218ENST00000515393 CSB-PGBD3P0DP91 1061 aa23.07■■□□□ 1.28
MCTP1-218ENST00000515393 TAOK2Q9UL54 1235 aa23.07■■□□□ 1.28
MCTP1-218ENST00000515393 SLC4A10Q6U841 1118 aa23.06■■□□□ 1.28
MCTP1-218ENST00000515393 NGDNQ8NEJ9 315 aaKnown RBP23.06■■□□□ 1.28
MCTP1-218ENST00000515393 RUFY2Q8WXA3 655 aa23.05■■□□□ 1.28
MCTP1-218ENST00000515393 LRRFIP1Q32MZ4 808 aaKnown RBP23.05■■□□□ 1.28
MCTP1-218ENST00000515393 DZIP1LQ8IYY4 767 aaKnown RBP23.05■■□□□ 1.28
MCTP1-218ENST00000515393 SCAPERQ9BY12 1400 aa23.05■■□□□ 1.28
MCTP1-218ENST00000515393 EHBP1L1Q8N3D4 1523 aa23.05■■□□□ 1.28
MCTP1-218ENST00000515393 ANKRD45Q5TZF3 282 aa23.04■■□□□ 1.28
MCTP1-218ENST00000515393 DDX49Q9Y6V7 483 aaKnown RBP23.04■■□□□ 1.28
MCTP1-218ENST00000515393 ANKRD50Q9ULJ7 1429 aa23.03■■□□□ 1.28
MCTP1-218ENST00000515393 TAF7LQ5H9L4 462 aa23.02■■□□□ 1.28
MCTP1-218ENST00000515393 DIAPH1O60610 1272 aaKnown RBP23.01■■□□□ 1.27
MCTP1-218ENST00000515393 APAF1O14727 1248 aa23.01■■□□□ 1.27
MCTP1-218ENST00000515393 GOLGA6L1Q8N7Z2 621 aa23■■□□□ 1.27
MCTP1-218ENST00000515393 COG6Q9Y2V7 657 aa23■■□□□ 1.27
MCTP1-218ENST00000515393 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23■■□□□ 1.27
MCTP1-218ENST00000515393 HFM1A2PYH4 1435 aa23■■□□□ 1.27
MCTP1-218ENST00000515393 NINLQ9Y2I6 1382 aa22.99■■□□□ 1.27
MCTP1-218ENST00000515393 NUCB2P80303 420 aa22.99■■□□□ 1.27
MCTP1-218ENST00000515393 RRP7AQ9Y3A4 280 aaKnown RBP22.98■■□□□ 1.27
MCTP1-218ENST00000515393 PLIN1O60240 522 aa22.98■■□□□ 1.27
MCTP1-218ENST00000515393 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.97■■□□□ 1.27
MCTP1-218ENST00000515393 GNAI1P63096 354 aa22.96■■□□□ 1.27
MCTP1-218ENST00000515393 HSP90AA2PQ14568 343 aaPredicted RBP22.95■■□□□ 1.26
MCTP1-218ENST00000515393 SF3A1Q15459 793 aaKnown RBP22.95■■□□□ 1.26
MCTP1-218ENST00000515393 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.94■■□□□ 1.26
MCTP1-218ENST00000515393 INTS3Q68E01 1043 aaKnown RBP22.94■■□□□ 1.26
MCTP1-218ENST00000515393 H3BQV1 296 aa22.94■■□□□ 1.26
MCTP1-218ENST00000515393 IFFO2Q5TF58 517 aa22.94■■□□□ 1.26
MCTP1-218ENST00000515393 HSP90AB4PQ58FF6 505 aa22.93■■□□□ 1.26
MCTP1-218ENST00000515393 TPM3P06753 285 aa22.93■■□□□ 1.26
MCTP1-218ENST00000515393 CHMP3Q9Y3E7 222 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms