RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 NAP1L2Q9ULW6 460 aaPredicted RBP10.19□□□□□ -0.78
PDLIM5-219ENST00000514743 TRIM52Q96A61 297 aa10.18□□□□□ -0.78
PDLIM5-219ENST00000514743 BCANQ96GW7 911 aa10.18□□□□□ -0.78
PDLIM5-219ENST00000514743 FOXD4L1Q9NU39 408 aa10.18□□□□□ -0.78
PDLIM5-219ENST00000514743 PREX2Q70Z35 1606 aa10.18□□□□□ -0.78
PDLIM5-219ENST00000514743 SHANK2Q9UPX8 1470 aa10.17□□□□□ -0.78
PDLIM5-219ENST00000514743 ARHGEF5Q12774 1597 aa10.16□□□□□ -0.78
PDLIM5-219ENST00000514743 CFDP1Q9UEE9 299 aaPredicted RBP10.15□□□□□ -0.78
PDLIM5-219ENST00000514743 SAMD9LQ8IVG5 1584 aa10.15□□□□□ -0.78
PDLIM5-219ENST00000514743 MBD5Q9P267 1494 aa10.15□□□□□ -0.78
PDLIM5-219ENST00000514743 RTL5Q5HYW3 569 aaPredicted RBP10.14□□□□□ -0.79
PDLIM5-219ENST00000514743 ERCC6L2Q5T890 1561 aa10.14□□□□□ -0.79
PDLIM5-219ENST00000514743 L3MBTL2Q969R5 705 aa10.14□□□□□ -0.79
PDLIM5-219ENST00000514743 KDM5DQ9BY66 1539 aa10.14□□□□□ -0.79
PDLIM5-219ENST00000514743 IRX6P78412 446 aaPredicted RBP10.14□□□□□ -0.79
PDLIM5-219ENST00000514743 CHMP4BQ9H444 224 aaKnown RBP10.14□□□□□ -0.79
PDLIM5-219ENST00000514743 TTC37Q6PGP7 1564 aa10.13□□□□□ -0.79
PDLIM5-219ENST00000514743 CCER2I3L3R5 266 aa10.12□□□□□ -0.79
PDLIM5-219ENST00000514743 PIAS4Q8N2W9 510 aaPredicted RBP10.12□□□□□ -0.79
PDLIM5-219ENST00000514743 WASHC2AQ641Q2 1341 aa10.12□□□□□ -0.79
PDLIM5-219ENST00000514743 HSPA5P11021 654 aaKnown RBP10.12□□□□□ -0.79
PDLIM5-219ENST00000514743 C9orf84Q5VXU9 1444 aa10.11□□□□□ -0.79
PDLIM5-219ENST00000514743 SPATA31E1Q6ZUB1 1445 aa10.11□□□□□ -0.79
PDLIM5-219ENST00000514743 NBPF8Q3BBV2 869 aa10.11□□□□□ -0.79
PDLIM5-219ENST00000514743 KIAA1107Q9UPP5 1409 aa10.11□□□□□ -0.79
PDLIM5-219ENST00000514743 PTPRGP23470 1445 aa10.1□□□□□ -0.79
PDLIM5-219ENST00000514743 ANKRD50Q9ULJ7 1429 aa10.1□□□□□ -0.79
PDLIM5-219ENST00000514743 ANKRD30AQ9BXX3 1397 aa10.1□□□□□ -0.79
PDLIM5-219ENST00000514743 MYO5CQ9NQX4 1742 aa10.1□□□□□ -0.79
PDLIM5-219ENST00000514743 PLEKHD1A6NEE1 506 aa10.1□□□□□ -0.79
PDLIM5-219ENST00000514743 ZNF777Q9ULD5 760 aaPredicted RBP10.1□□□□□ -0.79
PDLIM5-219ENST00000514743 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.09□□□□□ -0.79
PDLIM5-219ENST00000514743 BBXQ8WY36 941 aaPredicted RBP10.09□□□□□ -0.79
PDLIM5-219ENST00000514743 BCORL1Q5H9F3 1711 aa10.09□□□□□ -0.79
PDLIM5-219ENST00000514743 ANP32CO43423 234 aa10.09□□□□□ -0.79
PDLIM5-219ENST00000514743 MAST1Q9Y2H9 1570 aa10.09□□□□□ -0.79
PDLIM5-219ENST00000514743 CLASP1Q7Z460 1538 aa10.09□□□□□ -0.79
PDLIM5-219ENST00000514743 ABCC2Q92887 1545 aa10.09□□□□□ -0.79
PDLIM5-219ENST00000514743 KDM5CP41229 1560 aa10.08□□□□□ -0.8
PDLIM5-219ENST00000514743 CNTLNQ9NXG0 1405 aa10.08□□□□□ -0.8
PDLIM5-219ENST00000514743 C11orf95C9JLR9 678 aaPredicted RBP10.07□□□□□ -0.8
PDLIM5-219ENST00000514743 EIF4G2P78344 907 aaKnown RBP eCLIP10.07□□□□□ -0.8
PDLIM5-219ENST00000514743 CCDC141Q6ZP82 1450 aa10.07□□□□□ -0.8
PDLIM5-219ENST00000514743 ZCCHC11Q5TAX3 1644 aaKnown RBP10.07□□□□□ -0.8
PDLIM5-219ENST00000514743 SYCP2Q9BX26 1530 aa10.07□□□□□ -0.8
PDLIM5-219ENST00000514743 UNC13BO14795 1591 aa10.06□□□□□ -0.8
PDLIM5-219ENST00000514743 PLXNC1O60486 1568 aa10.06□□□□□ -0.8
PDLIM5-219ENST00000514743 CCDC7Q96M83 1385 aa10.05□□□□□ -0.8
PDLIM5-219ENST00000514743 CNKSR2Q8WXI2 1034 aa10.05□□□□□ -0.8
PDLIM5-219ENST00000514743 ARHGEF12Q9NZN5 1544 aa10.04□□□□□ -0.8
PDLIM5-219ENST00000514743 KIF15Q9NS87 1388 aa10.04□□□□□ -0.8
PDLIM5-219ENST00000514743 FAM135AQ9P2D6 1515 aa10.03□□□□□ -0.8
PDLIM5-219ENST00000514743 CDK11BP21127 795 aaKnown RBP10.03□□□□□ -0.8
PDLIM5-219ENST00000514743 UHRF1BP1Q6BDS2 1440 aa10.03□□□□□ -0.8
PDLIM5-219ENST00000514743 PKD2Q13563 968 aa10.03□□□□□ -0.8
PDLIM5-219ENST00000514743 HSP90AA2PQ14568 343 aaPredicted RBP10.03□□□□□ -0.8
PDLIM5-219ENST00000514743 IPO4Q8TEX9 1081 aaKnown RBP10.03□□□□□ -0.8
PDLIM5-219ENST00000514743 ZFP91Q96JP5 570 aaPredicted RBP10.03□□□□□ -0.8
PDLIM5-219ENST00000514743 ARHGAP5Q13017 1502 aa10.03□□□□□ -0.8
PDLIM5-219ENST00000514743 HNRNPMP52272 730 aaKnown RBP eCLIP10.03□□□□□ -0.85e-6■■■□□ 18.5
PDLIM5-219ENST00000514743 IQGAP3Q86VI3 1631 aa10.02□□□□□ -0.81
PDLIM5-219ENST00000514743 RALGAPBQ86X10 1494 aa10.02□□□□□ -0.81
PDLIM5-219ENST00000514743 NUP155O75694 1391 aa10.02□□□□□ -0.81
PDLIM5-219ENST00000514743 KIF7Q2M1P5 1343 aa10□□□□□ -0.81
PDLIM5-219ENST00000514743 UHRF1BP1LA0JNW5 1464 aa10□□□□□ -0.81
PDLIM5-219ENST00000514743 E9PCH4 1651 aa10□□□□□ -0.81
PDLIM5-219ENST00000514743 TRPM1Q7Z4N2 1603 aa10□□□□□ -0.81
PDLIM5-219ENST00000514743 MAGI2Q86UL8 1455 aa10□□□□□ -0.81
PDLIM5-219ENST00000514743 CANXP27824 592 aaKnown RBP9.99□□□□□ -0.81
PDLIM5-219ENST00000514743 ABCC1P33527 1531 aa9.99□□□□□ -0.81
PDLIM5-219ENST00000514743 TSPY4P0CV99 314 aa9.98□□□□□ -0.81
PDLIM5-219ENST00000514743 TSPY10P0CW01 314 aa9.98□□□□□ -0.81
PDLIM5-219ENST00000514743 NOP58Q9Y2X3 529 aaKnown RBP9.98□□□□□ -0.81
PDLIM5-219ENST00000514743 GTF2E1P29083 439 aaPredicted RBP9.98□□□□□ -0.81
PDLIM5-219ENST00000514743 RRP9O43818 475 aaKnown RBP9.98□□□□□ -0.81
PDLIM5-219ENST00000514743 CCDC184Q52MB2 194 aa9.98□□□□□ -0.81
PDLIM5-219ENST00000514743 FBXO3Q9UK99 471 aa9.98□□□□□ -0.81
PDLIM5-219ENST00000514743 BRPF3Q9ULD4 1205 aa9.98□□□□□ -0.81
PDLIM5-219ENST00000514743 USP47Q96K76 1375 aa9.98□□□□□ -0.81
PDLIM5-219ENST00000514743 BCCIPQ9P287 314 aaKnown RBP eCLIP9.97□□□□□ -0.81
PDLIM5-219ENST00000514743 HSP90B1P14625 803 aaKnown RBP9.97□□□□□ -0.81
PDLIM5-219ENST00000514743 PLA2R1Q13018 1463 aa9.97□□□□□ -0.81
PDLIM5-219ENST00000514743 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.97□□□□□ -0.81
PDLIM5-219ENST00000514743 POLR3GLQ9BT43 218 aa9.97□□□□□ -0.81
PDLIM5-219ENST00000514743 PRKRIP1Q9H875 184 aaPredicted RBP9.97□□□□□ -0.81
PDLIM5-219ENST00000514743 PLEKHH2Q8IVE3 1493 aa9.96□□□□□ -0.81
PDLIM5-219ENST00000514743 DHX29Q7Z478 1369 aaKnown RBP9.96□□□□□ -0.81
PDLIM5-219ENST00000514743 DUOX2Q9NRD8 1548 aa9.96□□□□□ -0.82
PDLIM5-219ENST00000514743 PLCH2O75038 1416 aa9.95□□□□□ -0.82
PDLIM5-219ENST00000514743 LAMC1P11047 1609 aa9.95□□□□□ -0.82
PDLIM5-219ENST00000514743 ARAP3Q8WWN8 1544 aa9.94□□□□□ -0.82
PDLIM5-219ENST00000514743 SECISBP2LQ93073 1101 aaKnown RBP9.94□□□□□ -0.82
PDLIM5-219ENST00000514743 ABCA9Q8IUA7 1624 aa9.94□□□□□ -0.82
PDLIM5-219ENST00000514743 CNGB1Q14028 1251 aaPredicted RBP9.94□□□□□ -0.82
PDLIM5-219ENST00000514743 DEPDC5O75140 1603 aa9.93□□□□□ -0.82
PDLIM5-219ENST00000514743 ERBINQ96RT1 1412 aa9.93□□□□□ -0.82
PDLIM5-219ENST00000514743 ZFYVE16Q7Z3T8 1539 aa9.93□□□□□ -0.82
PDLIM5-219ENST00000514743 ATP10AO60312 1499 aa9.92□□□□□ -0.82
PDLIM5-219ENST00000514743 RNF17Q9BXT8 1623 aaKnown RBP9.92□□□□□ -0.82
PDLIM5-219ENST00000514743 A2MP01023 1474 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms