RNA–Protein interactions for RNA: ENST00000514552.5

PDE4D-222, Transcript of phosphodiesterase 4D, humanhuman

TSL 3

Gene PDE4D, Length 494 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-222ENST00000514552 ERBB3P21860 1342 aa13.25□□□□□ -0.29
PDE4D-222ENST00000514552 PRIM1P49642 420 aaKnown RBP13.25□□□□□ -0.29
PDE4D-222ENST00000514552 MARVELD3Q96A59 401 aa13.25□□□□□ -0.29
PDE4D-222ENST00000514552 HMGXB3Q12766 1538 aa13.23□□□□□ -0.29
PDE4D-222ENST00000514552 SMARCA2P51531 1590 aa13.23□□□□□ -0.29
PDE4D-222ENST00000514552 MAP3K7O43318 606 aa13.22□□□□□ -0.29
PDE4D-222ENST00000514552 GPIHBP1Q8IV16 184 aa13.22□□□□□ -0.29
PDE4D-222ENST00000514552 RBM33Q96EV2 1170 aaKnown RBP13.22□□□□□ -0.29
PDE4D-222ENST00000514552 SMARCA4P51532 1647 aa13.21□□□□□ -0.29
PDE4D-222ENST00000514552 ADAM33Q9BZ11 813 aa13.21□□□□□ -0.29
PDE4D-222ENST00000514552 ATAD2BQ9ULI0 1458 aa13.21□□□□□ -0.3
PDE4D-222ENST00000514552 NUTM2FA1L443 756 aa13.2□□□□□ -0.3
PDE4D-222ENST00000514552 VARS2Q5ST30 1063 aaKnown RBP13.2□□□□□ -0.3
PDE4D-222ENST00000514552 BCL2L12Q9HB09 334 aa13.2□□□□□ -0.3
PDE4D-222ENST00000514552 TPRNQ4KMQ1 711 aa13.19□□□□□ -0.3
PDE4D-222ENST00000514552 FAM205CA6NFA0 338 aa13.18□□□□□ -0.3
PDE4D-222ENST00000514552 C6orf132Q5T0Z8 1188 aa13.18□□□□□ -0.3
PDE4D-222ENST00000514552 ZC3H15Q8WU90 426 aaKnown RBP13.18□□□□□ -0.3
PDE4D-222ENST00000514552 CUX2O14529 1486 aa13.17□□□□□ -0.3
PDE4D-222ENST00000514552 BAZ1AQ9NRL2 1556 aaPredicted RBP13.17□□□□□ -0.3
PDE4D-222ENST00000514552 PEG3Q9GZU2 1588 aa13.16□□□□□ -0.3
PDE4D-222ENST00000514552 TSR1Q2NL82 804 aaKnown RBP13.16□□□□□ -0.3
PDE4D-222ENST00000514552 FCHSD2O94868 740 aa13.15□□□□□ -0.3
PDE4D-222ENST00000514552 GPR37O15354 613 aa13.14□□□□□ -0.31
PDE4D-222ENST00000514552 HS3ST6Q96QI5 342 aa13.14□□□□□ -0.31
PDE4D-222ENST00000514552 CDHR5Q9HBB8 845 aa13.14□□□□□ -0.31
PDE4D-222ENST00000514552 PTPREP23469 700 aa13.13□□□□□ -0.31
PDE4D-222ENST00000514552 PTGDRQ13258 359 aa13.13□□□□□ -0.31
PDE4D-222ENST00000514552 CERKQ8TCT0 537 aa13.13□□□□□ -0.31
PDE4D-222ENST00000514552 ZNF687Q8N1G0 1237 aa13.12□□□□□ -0.31
PDE4D-222ENST00000514552 NPDC1Q9NQX5 325 aaPredicted RBP13.12□□□□□ -0.31
PDE4D-222ENST00000514552 HIC1Q14526 733 aa13.11□□□□□ -0.31
PDE4D-222ENST00000514552 ERCC6Q03468 1493 aa13.1□□□□□ -0.31
PDE4D-222ENST00000514552 ZMYND10O75800 440 aa13.1□□□□□ -0.31
PDE4D-222ENST00000514552 PBX2P40425 430 aa13.1□□□□□ -0.31
PDE4D-222ENST00000514552 KCNH8Q96L42 1107 aa13.1□□□□□ -0.31
PDE4D-222ENST00000514552 POTEB3A0JP26 581 aa13.09□□□□□ -0.31
PDE4D-222ENST00000514552 POTEBQ6S5H4 581 aa13.09□□□□□ -0.31
PDE4D-222ENST00000514552 BAZ1BQ9UIG0 1483 aaKnown RBP13.09□□□□□ -0.31
PDE4D-222ENST00000514552 PPP1R3GB7ZBB8 358 aa13.08□□□□□ -0.32
PDE4D-222ENST00000514552 PRKCSHP14314 528 aaPredicted RBP13.08□□□□□ -0.32
PDE4D-222ENST00000514552 KCNK17Q96T54 332 aa13.08□□□□□ -0.32
PDE4D-222ENST00000514552 ARHGAP33O14559 1287 aa13.07□□□□□ -0.32
PDE4D-222ENST00000514552 GNPATO15228 680 aa13.07□□□□□ -0.32
PDE4D-222ENST00000514552 BARGINQ6ZT62 677 aa13.07□□□□□ -0.32
PDE4D-222ENST00000514552 COL9A1P20849 921 aa13.05□□□□□ -0.32
PDE4D-222ENST00000514552 POTEEQ6S8J3 1075 aa13.04□□□□□ -0.32
PDE4D-222ENST00000514552 RBM27Q9P2N5 1060 aaKnown RBP13.04□□□□□ -0.32
PDE4D-222ENST00000514552 PSEN2P49810 448 aa13.02□□□□□ -0.33
PDE4D-222ENST00000514552 PRSS12P56730 875 aa13.02□□□□□ -0.33
PDE4D-222ENST00000514552 LAMC3Q9Y6N6 1575 aa13.02□□□□□ -0.33
PDE4D-222ENST00000514552 CDCA7LQ96GN5 454 aa13□□□□□ -0.33
PDE4D-222ENST00000514552 AXIN2Q9Y2T1 843 aa13□□□□□ -0.33
PDE4D-222ENST00000514552 MAP2K5Q13163 448 aa12.99□□□□□ -0.33
PDE4D-222ENST00000514552 KRI1Q8N9T8 703 aaKnown RBP12.99□□□□□ -0.33
PDE4D-222ENST00000514552 MROH2BQ7Z745 1585 aa12.98□□□□□ -0.33
PDE4D-222ENST00000514552 MINK1Q8N4C8 1332 aaPredicted RBP12.98□□□□□ -0.33
PDE4D-222ENST00000514552 FECHP22830 423 aa12.98□□□□□ -0.33
PDE4D-222ENST00000514552 POTEGQ6S5H5 508 aa12.98□□□□□ -0.33
PDE4D-222ENST00000514552 TTC13Q8NBP0 860 aa12.98□□□□□ -0.33
PDE4D-222ENST00000514552 ZBED2Q9BTP6 218 aa12.98□□□□□ -0.33
PDE4D-222ENST00000514552 SLC4A5Q9BY07 1137 aa12.98□□□□□ -0.33
PDE4D-222ENST00000514552 NESP48681 1621 aa12.98□□□□□ -0.33
PDE4D-222ENST00000514552 ONECUT3O60422 494 aaPredicted RBP12.97□□□□□ -0.33
PDE4D-222ENST00000514552 PADI6Q6TGC4 694 aa12.97□□□□□ -0.33
PDE4D-222ENST00000514552 THOC2Q8NI27 1593 aaKnown RBP12.96□□□□□ -0.33
PDE4D-222ENST00000514552 POTEMA6NI47 508 aa12.96□□□□□ -0.33
PDE4D-222ENST00000514552 DMRTA1Q5VZB9 504 aa12.96□□□□□ -0.33
PDE4D-222ENST00000514552 TRIM6-TRIM34B2RNG4 842 aa12.95□□□□□ -0.34
PDE4D-222ENST00000514552 IRF6O14896 467 aa12.94□□□□□ -0.34
PDE4D-222ENST00000514552 SLC24A3Q9HC58 644 aa12.94□□□□□ -0.34
PDE4D-222ENST00000514552 LSM11P83369 360 aaKnown RBP eCLIP12.93□□□□□ -0.34
PDE4D-222ENST00000514552 TSKSQ9UJT2 592 aa12.93□□□□□ -0.34
PDE4D-222ENST00000514552 TK2O00142 265 aa12.92□□□□□ -0.34
PDE4D-222ENST00000514552 PROX2Q3B8N5 592 aa12.92□□□□□ -0.34
PDE4D-222ENST00000514552 PACS2Q86VP3 889 aa12.92□□□□□ -0.34
PDE4D-222ENST00000514552 AK7Q96M32 723 aa12.92□□□□□ -0.34
PDE4D-222ENST00000514552 FAM198AQ9UFP1 575 aa12.92□□□□□ -0.34
PDE4D-222ENST00000514552 PDS5BQ9NTI5 1447 aa12.91□□□□□ -0.34
PDE4D-222ENST00000514552 VPS9D1Q9Y2B5 631 aa12.91□□□□□ -0.34
PDE4D-222ENST00000514552 ADGRG1Q9Y653 693 aa12.9□□□□□ -0.34
PDE4D-222ENST00000514552 OATP04181 439 aa12.89□□□□□ -0.35
PDE4D-222ENST00000514552 CCDC102AQ96A19 550 aa12.89□□□□□ -0.35
PDE4D-222ENST00000514552 NBPF26B4DH59 902 aa12.88□□□□□ -0.35
PDE4D-222ENST00000514552 RABGEF1Q9UJ41 708 aa12.88□□□□□ -0.35
PDE4D-222ENST00000514552 KIAA1468Q9P260 1216 aa12.87□□□□□ -0.35
PDE4D-222ENST00000514552 KIF21AQ7Z4S6 1674 aa12.86□□□□□ -0.35
PDE4D-222ENST00000514552 CDAN1Q8IWY9 1227 aa12.86□□□□□ -0.35
PDE4D-222ENST00000514552 KRTAP3-3Q9BYR6 98 aa12.86□□□□□ -0.35
PDE4D-222ENST00000514552 KRTAP3-2Q9BYR7 98 aa12.86□□□□□ -0.35
PDE4D-222ENST00000514552 CADPSQ9ULU8 1353 aa12.85□□□□□ -0.35
PDE4D-222ENST00000514552 ADGRD1Q6QNK2 874 aa12.85□□□□□ -0.35
PDE4D-222ENST00000514552 RBM46Q8TBY0 533 aaKnown RBP12.85□□□□□ -0.35
PDE4D-222ENST00000514552 TATDN2Q93075 761 aa12.85□□□□□ -0.35
PDE4D-222ENST00000514552 TRIM66O15016 1216 aa12.83□□□□□ -0.36
PDE4D-222ENST00000514552 FAM161AQ3B820 660 aa12.83□□□□□ -0.36
PDE4D-222ENST00000514552 ANKRD13DQ6ZTN6 518 aa12.83□□□□□ -0.36
PDE4D-222ENST00000514552 NUDT18Q6ZVK8 323 aa12.83□□□□□ -0.36
PDE4D-222ENST00000514552 METTL3Q86U44 580 aaKnown RBP12.83□□□□□ -0.36
PDE4D-222ENST00000514552 PXYLP1Q8TE99 480 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms