RNA–Protein interactions for RNA: ENST00000514189.5

PRDM16-208, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRDM16, Length 4,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-208ENST00000514189 IFT140Q96RY7 1462 aa16.59■□□□□ 0.25
PRDM16-208ENST00000514189 OS9Q13438 667 aaPredicted RBP16.59■□□□□ 0.25
PRDM16-208ENST00000514189 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.59■□□□□ 0.25
PRDM16-208ENST00000514189 FOXD4L5Q5VV16 416 aaPredicted RBP16.58■□□□□ 0.25
PRDM16-208ENST00000514189 FOXD4L4Q8WXT5 416 aaPredicted RBP16.58■□□□□ 0.25
PRDM16-208ENST00000514189 EFCAB2Q5VUJ9 269 aa16.58■□□□□ 0.24
PRDM16-208ENST00000514189 CENPJQ9HC77 1338 aaPredicted RBP16.58■□□□□ 0.24
PRDM16-208ENST00000514189 CASC1Q6TDU7 716 aa16.58■□□□□ 0.24
PRDM16-208ENST00000514189 CCDC7Q96M83 1385 aa16.57■□□□□ 0.24
PRDM16-208ENST00000514189 RWDD1Q9H446 243 aaPredicted RBP16.57■□□□□ 0.24
PRDM16-208ENST00000514189 URB2Q14146 1524 aaKnown RBP16.57■□□□□ 0.24
PRDM16-208ENST00000514189 NAP1L2Q9ULW6 460 aaPredicted RBP16.57■□□□□ 0.24
PRDM16-208ENST00000514189 FANCIQ9NVI1 1328 aa16.57■□□□□ 0.24
PRDM16-208ENST00000514189 KCNJ4P48050 445 aa16.56■□□□□ 0.24
PRDM16-208ENST00000514189 KIF15Q9NS87 1388 aa16.54■□□□□ 0.24
PRDM16-208ENST00000514189 PDE3BQ13370 1112 aa16.54■□□□□ 0.24
PRDM16-208ENST00000514189 FOXD4L6Q3SYB3 417 aaPredicted RBP16.54■□□□□ 0.24
PRDM16-208ENST00000514189 FOXD4L3Q6VB84 417 aaPredicted RBP16.54■□□□□ 0.24
PRDM16-208ENST00000514189 ERICH3Q5RHP9 1530 aa16.54■□□□□ 0.24
PRDM16-208ENST00000514189 ABCA10Q8WWZ4 1543 aa16.54■□□□□ 0.24
PRDM16-208ENST00000514189 MS4A1P11836 297 aa16.53■□□□□ 0.24
PRDM16-208ENST00000514189 NBPF1Q3BBV0 1214 aa16.53■□□□□ 0.24
PRDM16-208ENST00000514189 SLC4A10Q6U841 1118 aa16.53■□□□□ 0.24
PRDM16-208ENST00000514189 AKNAQ7Z591 1439 aa16.52■□□□□ 0.24
PRDM16-208ENST00000514189 ADAMTS8Q9UP79 889 aa16.52■□□□□ 0.23
PRDM16-208ENST00000514189 FGD6Q6ZV73 1430 aa16.51■□□□□ 0.23
PRDM16-208ENST00000514189 C11orf95C9JLR9 678 aaPredicted RBP16.51■□□□□ 0.23
PRDM16-208ENST00000514189 FGD1P98174 961 aa16.51■□□□□ 0.23
PRDM16-208ENST00000514189 KANK1Q14678 1352 aa16.51■□□□□ 0.23
PRDM16-208ENST00000514189 SPAG9O60271 1321 aaKnown RBP16.5■□□□□ 0.23
PRDM16-208ENST00000514189 FAM161AQ3B820 660 aa16.5■□□□□ 0.23
PRDM16-208ENST00000514189 PANK1Q8TE04 598 aa16.5■□□□□ 0.23
PRDM16-208ENST00000514189 PNNQ9H307 717 aaKnown RBP16.49■□□□□ 0.23
PRDM16-208ENST00000514189 IPO8O15397 1037 aaKnown RBP16.49■□□□□ 0.23
PRDM16-208ENST00000514189 MSH5O43196 834 aa16.48■□□□□ 0.23
PRDM16-208ENST00000514189 GSE1Q14687 1217 aa16.48■□□□□ 0.23
PRDM16-208ENST00000514189 OSCARQ8IYS5 282 aa16.48■□□□□ 0.23
PRDM16-208ENST00000514189 CCDC144AA2RUR9 1427 aa16.47■□□□□ 0.23
PRDM16-208ENST00000514189 PTPRGP23470 1445 aa16.47■□□□□ 0.23
PRDM16-208ENST00000514189 LRRC9Q6ZRR7 1453 aa16.47■□□□□ 0.23
PRDM16-208ENST00000514189 L1TD1Q5T7N2 865 aaKnown RBP16.46■□□□□ 0.23
PRDM16-208ENST00000514189 HDGFL2Q7Z4V5 671 aaPredicted RBP16.46■□□□□ 0.23
PRDM16-208ENST00000514189 LTV1Q96GA3 475 aaPredicted RBP16.46■□□□□ 0.23
PRDM16-208ENST00000514189 CENPQQ7L2Z9 268 aaPredicted RBP16.46■□□□□ 0.23
PRDM16-208ENST00000514189 BIVM-ERCC5R4GMW8 1640 aa16.46■□□□□ 0.22
PRDM16-208ENST00000514189 SNAPC4Q5SXM2 1469 aa16.45■□□□□ 0.22
PRDM16-208ENST00000514189 HAP1P54257 671 aaPredicted RBP16.45■□□□□ 0.22
PRDM16-208ENST00000514189 IL27Q8NEV9 243 aa16.45■□□□□ 0.22
PRDM16-208ENST00000514189 PMFBP1Q8TBY8 1022 aa16.45■□□□□ 0.22
PRDM16-208ENST00000514189 ANKRD45Q5TZF3 282 aa16.44■□□□□ 0.22
PRDM16-208ENST00000514189 WASHC2CQ9Y4E1 1318 aa16.44■□□□□ 0.22
PRDM16-208ENST00000514189 UACAQ9BZF9 1416 aa16.44■□□□□ 0.22
PRDM16-208ENST00000514189 GOLGA6L3A6NEY3 463 aa16.44■□□□□ 0.22
PRDM16-208ENST00000514189 MSNP26038 577 aaKnown RBP16.44■□□□□ 0.22
PRDM16-208ENST00000514189 RTF1Q92541 710 aaKnown RBP16.44■□□□□ 0.22
PRDM16-208ENST00000514189 TMEM132EQ6IEE7 984 aa16.44■□□□□ 0.22
PRDM16-208ENST00000514189 AMER1Q5JTC6 1135 aaPredicted RBP16.43■□□□□ 0.22
PRDM16-208ENST00000514189 MINK1Q8N4C8 1332 aaPredicted RBP16.43■□□□□ 0.22
PRDM16-208ENST00000514189 WDR97A6NE52 1622 aa16.43■□□□□ 0.22
PRDM16-208ENST00000514189 TRIM6-TRIM34B2RNG4 842 aa16.42■□□□□ 0.22
PRDM16-208ENST00000514189 ZRSR1Q15695 479 aaKnown RBP16.42■□□□□ 0.22
PRDM16-208ENST00000514189 NFKBIBQ15653 356 aa16.41■□□□□ 0.22
PRDM16-208ENST00000514189 ZNF608Q9ULD9 1512 aaPredicted RBP16.41■□□□□ 0.22
PRDM16-208ENST00000514189 CNTLNQ9NXG0 1405 aa16.41■□□□□ 0.22
PRDM16-208ENST00000514189 GOLGA6L4A6NEF3 574 aa16.4■□□□□ 0.22
PRDM16-208ENST00000514189 BRPF3Q9ULD4 1205 aa16.4■□□□□ 0.22
PRDM16-208ENST00000514189 GBP4Q96PP9 640 aa16.4■□□□□ 0.22
PRDM16-208ENST00000514189 CHMP4BQ9H444 224 aaKnown RBP16.4■□□□□ 0.22
PRDM16-208ENST00000514189 TULP1O00294 542 aaPredicted RBP16.39■□□□□ 0.21
PRDM16-208ENST00000514189 PNISRQ8TF01 805 aaKnown RBP16.39■□□□□ 0.21
PRDM16-208ENST00000514189 NECTIN2Q92692 538 aa16.39■□□□□ 0.21
PRDM16-208ENST00000514189 MYOM3Q5VTT5 1437 aa16.39■□□□□ 0.21
PRDM16-208ENST00000514189 ZNF330Q9Y3S2 320 aaPredicted RBP16.39■□□□□ 0.21
PRDM16-208ENST00000514189 BCAR3O75815 825 aa16.39■□□□□ 0.21
PRDM16-208ENST00000514189 LNPKQ9C0E8 428 aa16.39■□□□□ 0.21
PRDM16-208ENST00000514189 RRBP1Q9P2E9 1410 aaKnown RBP16.38■□□□□ 0.21
PRDM16-208ENST00000514189 E9PSI1 815 aa16.37■□□□□ 0.21
PRDM16-208ENST00000514189 FRAT2O75474 233 aaPredicted RBP16.37■□□□□ 0.21
PRDM16-208ENST00000514189 GGNBP2Q9H3C7 697 aa16.37■□□□□ 0.21
PRDM16-208ENST00000514189 AFAP1Q8N556 730 aa16.37■□□□□ 0.21
PRDM16-208ENST00000514189 CFAP70Q5T0N1 1121 aa16.36■□□□□ 0.21
PRDM16-208ENST00000514189 ZKSCAN2Q63HK3 967 aa16.35■□□□□ 0.21
PRDM16-208ENST00000514189 TERF2IPQ9NYB0 399 aa16.35■□□□□ 0.21
PRDM16-208ENST00000514189 NCOA2Q15596 1464 aa16.35■□□□□ 0.21
PRDM16-208ENST00000514189 HMOX1P09601 288 aa16.35■□□□□ 0.21
PRDM16-208ENST00000514189 CCDC9Q9Y3X0 531 aaKnown RBP16.34■□□□□ 0.21
PRDM16-208ENST00000514189 CALD1Q05682 793 aaKnown RBP16.34■□□□□ 0.21
PRDM16-208ENST00000514189 CYB5RLQ6IPT4 315 aa16.34■□□□□ 0.21
PRDM16-208ENST00000514189 DRC7Q8IY82 874 aa16.34■□□□□ 0.21
PRDM16-208ENST00000514189 ANO8Q9HCE9 1232 aaPredicted RBP16.33■□□□□ 0.21
PRDM16-208ENST00000514189 USP35Q9P2H5 1018 aa16.33■□□□□ 0.21
PRDM16-208ENST00000514189 DDX49Q9Y6V7 483 aaKnown RBP16.32■□□□□ 0.2
PRDM16-208ENST00000514189 RIPK4P57078 832 aa16.32■□□□□ 0.2
PRDM16-208ENST00000514189 CGNL1Q0VF96 1302 aa16.32■□□□□ 0.2
PRDM16-208ENST00000514189 KIAA1211Q6ZU35 1233 aa16.31■□□□□ 0.2
PRDM16-208ENST00000514189 RILPL2Q969X0 211 aa16.31■□□□□ 0.2
PRDM16-208ENST00000514189 PRG4Q92954 1404 aaPredicted RBP16.31■□□□□ 0.2
PRDM16-208ENST00000514189 MTHFSP49914 203 aa16.31■□□□□ 0.2
PRDM16-208ENST00000514189 MCCP23508 829 aa16.31■□□□□ 0.2
PRDM16-208ENST00000514189 CASKIN1Q8WXD9 1431 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms