RNA–Protein interactions for RNA: ENST00000513720.5

AFP-205, Transcript of alpha fetoprotein, humanhuman

TSL 1 (best)

Gene AFP, Length 197 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-205ENST00000513720 SETDB1Q15047 1291 aa5.11□□□□□ -1.59
AFP-205ENST00000513720 CCDC96Q2M329 555 aa5.11□□□□□ -1.59
AFP-205ENST00000513720 CDCA8Q53HL2 280 aa5.11□□□□□ -1.59
AFP-205ENST00000513720 UTP14CQ5TAP6 766 aaKnown RBP5.11□□□□□ -1.59
AFP-205ENST00000513720 NBPF6Q5VWK0 638 aa5.11□□□□□ -1.59
AFP-205ENST00000513720 NBPF5PQ86XG9 351 aaPredicted RBP5.11□□□□□ -1.59
AFP-205ENST00000513720 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.11□□□□□ -1.59
AFP-205ENST00000513720 NBPF4Q96M43 638 aa5.11□□□□□ -1.59
AFP-205ENST00000513720 CCER2I3L3R5 266 aa5.1□□□□□ -1.59
AFP-205ENST00000513720 SEMA3FQ13275 785 aa5.1□□□□□ -1.59
AFP-205ENST00000513720 DNAJC5Q9H3Z4 198 aa5.1□□□□□ -1.59
AFP-205ENST00000513720 YY1AP1Q9H869 796 aa5.1□□□□□ -1.59
AFP-205ENST00000513720 MRVI1Q9Y6F6 885 aa5.1□□□□□ -1.59
AFP-205ENST00000513720 WASHC2CQ9Y4E1 1318 aa5.09□□□□□ -1.59
AFP-205ENST00000513720 VGLL3A8MV65 326 aa5.09□□□□□ -1.59
AFP-205ENST00000513720 PKD2Q13563 968 aa5.09□□□□□ -1.59
AFP-205ENST00000513720 SLC52A1Q9NWF4 448 aa5.09□□□□□ -1.59
AFP-205ENST00000513720 FEZ2Q9UHY8 353 aaPredicted RBP5.09□□□□□ -1.59
AFP-205ENST00000513720 PPME1Q9Y570 386 aa5.09□□□□□ -1.59
AFP-205ENST00000513720 ANKRD62A6NC57 917 aa5.08□□□□□ -1.6
AFP-205ENST00000513720 TPM2P07951 284 aa5.08□□□□□ -1.6
AFP-205ENST00000513720 KRBA2Q6ZNG9 492 aa5.08□□□□□ -1.6
AFP-205ENST00000513720 BANK1Q8NDB2 785 aa5.08□□□□□ -1.6
AFP-205ENST00000513720 TRIM41Q8WV44 630 aa5.08□□□□□ -1.6
AFP-205ENST00000513720 SPATA32Q96LK8 384 aa5.08□□□□□ -1.6
AFP-205ENST00000513720 TSPAN18Q96SJ8 248 aa5.08□□□□□ -1.6
AFP-205ENST00000513720 PAIP2Q9BPZ3 127 aaKnown RBP5.08□□□□□ -1.6
AFP-205ENST00000513720 MTA3Q9BTC8 594 aa5.08□□□□□ -1.6
AFP-205ENST00000513720 HIRIP3Q9BW71 556 aaPredicted RBP5.08□□□□□ -1.6
AFP-205ENST00000513720 SPINK5Q9NQ38 1064 aaPredicted RBP5.08□□□□□ -1.6
AFP-205ENST00000513720 GEMIN8Q9NWZ8 242 aaKnown RBP5.08□□□□□ -1.6
AFP-205ENST00000513720 RAI14Q9P0K7 980 aa5.08□□□□□ -1.6
AFP-205ENST00000513720 NUB1Q9Y5A7 615 aa5.08□□□□□ -1.6
AFP-205ENST00000513720 GOLGA6L3A6NEY3 463 aa5.07□□□□□ -1.6
AFP-205ENST00000513720 ZNF500O60304 480 aaPredicted RBP5.07□□□□□ -1.6
AFP-205ENST00000513720 ZRANB2O95218 330 aaKnown RBP eCLIP5.07□□□□□ -1.6
AFP-205ENST00000513720 MAP2K1Q02750 393 aaPredicted RBP5.07□□□□□ -1.6
AFP-205ENST00000513720 LMOD3Q0VAK6 560 aa5.07□□□□□ -1.6
AFP-205ENST00000513720 ZRSR2Q15696 482 aaKnown RBP5.07□□□□□ -1.6
AFP-205ENST00000513720 ZKSCAN8Q15776 578 aaPredicted RBP5.07□□□□□ -1.6
AFP-205ENST00000513720 LONRF3Q496Y0 759 aa5.07□□□□□ -1.6
AFP-205ENST00000513720 PPP4R3BQ5MIZ7 849 aa5.07□□□□□ -1.6
AFP-205ENST00000513720 CCDC181Q5TID7 509 aa5.07□□□□□ -1.6
AFP-205ENST00000513720 NBPF10Q6P3W6 841 aaKnown RBP5.07□□□□□ -1.6
AFP-205ENST00000513720 SDR16C5Q8N3Y7 309 aa5.07□□□□□ -1.6
AFP-205ENST00000513720 MSL3Q8N5Y2 521 aaKnown RBP5.07□□□□□ -1.6
AFP-205ENST00000513720 MORC4Q8TE76 937 aa5.07□□□□□ -1.6
AFP-205ENST00000513720 BSDC1Q9NW68 430 aaPredicted RBP5.07□□□□□ -1.6
AFP-205ENST00000513720 FRMD4BQ9Y2L6 1034 aa5.07□□□□□ -1.6
AFP-205ENST00000513720 KIF20AO95235 890 aa5.06□□□□□ -1.6
AFP-205ENST00000513720 LIG1P18858 919 aa5.06□□□□□ -1.6
AFP-205ENST00000513720 FOXD4Q12950 439 aaPredicted RBP5.06□□□□□ -1.6
AFP-205ENST00000513720 ZNF280DQ6N043 979 aa5.06□□□□□ -1.6
AFP-205ENST00000513720 LMOD2Q6P5Q4 547 aa5.06□□□□□ -1.6
AFP-205ENST00000513720 NME8Q8N427 588 aa5.06□□□□□ -1.6
AFP-205ENST00000513720 MPNDQ8N594 471 aa5.06□□□□□ -1.6
AFP-205ENST00000513720 CXorf38Q8TB03 319 aa5.06□□□□□ -1.6
AFP-205ENST00000513720 PNNQ9H307 717 aaKnown RBP5.06□□□□□ -1.6
AFP-205ENST00000513720 ZBTB47Q9UFB7 747 aaPredicted RBP5.06□□□□□ -1.6
AFP-205ENST00000513720 GOLGA6CA6NDK9 693 aa5.05□□□□□ -1.6
AFP-205ENST00000513720 GOLGA6BA6NDN3 693 aa5.05□□□□□ -1.6
AFP-205ENST00000513720 DHX16O60231 1041 aaKnown RBP5.05□□□□□ -1.6
AFP-205ENST00000513720 GOLGA6DP0CG33 693 aa5.05□□□□□ -1.6
AFP-205ENST00000513720 SATB1Q01826 763 aa5.05□□□□□ -1.6
AFP-205ENST00000513720 MTERF4Q7Z6M4 381 aaKnown RBP5.05□□□□□ -1.6
AFP-205ENST00000513720 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.05□□□□□ -1.6
AFP-205ENST00000513720 ZNF513Q8N8E2 541 aaPredicted RBP5.05□□□□□ -1.6
AFP-205ENST00000513720 UBA5Q9GZZ9 404 aa5.05□□□□□ -1.6
AFP-205ENST00000513720 WDR70Q9NW82 654 aa5.05□□□□□ -1.6
AFP-205ENST00000513720 GOLGA6AQ9NYA3 693 aa5.05□□□□□ -1.6
AFP-205ENST00000513720 ZBTB12Q9Y330 459 aaPredicted RBP5.05□□□□□ -1.6
AFP-205ENST00000513720 SH3BP5O60239 455 aa5.04□□□□□ -1.6
AFP-205ENST00000513720 CREBRFQ8IUR6 639 aa5.04□□□□□ -1.6
AFP-205ENST00000513720 MICAL1Q8TDZ2 1067 aa5.04□□□□□ -1.6
AFP-205ENST00000513720 TMX4Q9H1E5 349 aaPredicted RBP5.04□□□□□ -1.6
AFP-205ENST00000513720 MAGEC2Q9UBF1 373 aaPredicted RBP5.04□□□□□ -1.6
AFP-205ENST00000513720 WASHC2AQ641Q2 1341 aa5.03□□□□□ -1.6
AFP-205ENST00000513720 RIOK3O14730 519 aaKnown RBP5.03□□□□□ -1.6
AFP-205ENST00000513720 IRF6O14896 467 aa5.03□□□□□ -1.6
AFP-205ENST00000513720 LETM1O95202 739 aaPredicted RBP5.03□□□□□ -1.6
AFP-205ENST00000513720 KIF4AO95239 1232 aa5.03□□□□□ -1.6
AFP-205ENST00000513720 SSFA2P28290 1259 aa5.03□□□□□ -1.6
AFP-205ENST00000513720 SLC20A2Q08357 652 aa5.03□□□□□ -1.6
AFP-205ENST00000513720 CSPP1Q1MSJ5 1256 aa5.03□□□□□ -1.6
AFP-205ENST00000513720 ZCRB1Q8TBF4 217 aaKnown RBP5.03□□□□□ -1.6
AFP-205ENST00000513720 MKL1Q969V6 931 aa5.03□□□□□ -1.6
AFP-205ENST00000513720 CCDC97Q96F63 343 aaPredicted RBP5.03□□□□□ -1.6
AFP-205ENST00000513720 TSPYL1Q9H0U9 437 aa5.03□□□□□ -1.6
AFP-205ENST00000513720 TESPA1A2RU30 521 aaPredicted RBP5.02□□□□□ -1.61
AFP-205ENST00000513720 PEX14O75381 377 aa5.02□□□□□ -1.61
AFP-205ENST00000513720 SCP2P22307 547 aa5.02□□□□□ -1.61
AFP-205ENST00000513720 FOSBP53539 338 aa5.02□□□□□ -1.61
AFP-205ENST00000513720 DMTNQ08495 405 aa5.02□□□□□ -1.61
AFP-205ENST00000513720 MTA1Q13330 715 aa5.02□□□□□ -1.61
AFP-205ENST00000513720 ZFYVE27Q5T4F4 411 aa5.02□□□□□ -1.61
AFP-205ENST00000513720 GET4Q7L5D6 327 aaPredicted RBP5.02□□□□□ -1.61
AFP-205ENST00000513720 DDRGK1Q96HY6 314 aa5.02□□□□□ -1.61
AFP-205ENST00000513720 GTPBP4Q9BZE4 634 aaKnown RBP5.02□□□□□ -1.61
AFP-205ENST00000513720 SUGT1Q9Y2Z0 365 aa5.02□□□□□ -1.61
AFP-205ENST00000513720 ECM2O94769 699 aaPredicted RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms