RNA–Protein interactions for RNA: ENST00000513522.5

CCSER1-211, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 2

Gene CCSER1, Length 605 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-211ENST00000513522 PPP1R3GB7ZBB8 358 aa8.21□□□□□ -1.1
CCSER1-211ENST00000513522 DCAF8L2P0C7V8 631 aa8.21□□□□□ -1.1
CCSER1-211ENST00000513522 LOC100996750A0A140TA64 210 aa8.19□□□□□ -1.1
CCSER1-211ENST00000513522 LCE2AQ5TA79 106 aaPredicted RBP8.19□□□□□ -1.1
CCSER1-211ENST00000513522 KRTAP4-6Q9BYQ5 205 aa8.19□□□□□ -1.1
CCSER1-211ENST00000513522 TREML4Q6UXN2 200 aa8.18□□□□□ -1.1
CCSER1-211ENST00000513522 TSR3Q9UJK0 312 aaKnown RBP8.18□□□□□ -1.1
CCSER1-211ENST00000513522 POTECB2RU33 542 aa8.17□□□□□ -1.1
CCSER1-211ENST00000513522 COL9A1P20849 921 aa8.17□□□□□ -1.1
CCSER1-211ENST00000513522 PPP1R18Q6NYC8 613 aa8.17□□□□□ -1.1
CCSER1-211ENST00000513522 KIAA1468Q9P260 1216 aa8.17□□□□□ -1.1
CCSER1-211ENST00000513522 HPS5Q9UPZ3 1129 aa8.16□□□□□ -1.1
CCSER1-211ENST00000513522 TJAP1Q5JTD0 557 aa8.15□□□□□ -1.1
CCSER1-211ENST00000513522 EVI5O60447 810 aa8.14□□□□□ -1.11
CCSER1-211ENST00000513522 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.14□□□□□ -1.11
CCSER1-211ENST00000513522 ONECUT3O60422 494 aaPredicted RBP8.12□□□□□ -1.11
CCSER1-211ENST00000513522 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.12□□□□□ -1.11
CCSER1-211ENST00000513522 SEPT9Q9UHD8 586 aaPredicted RBP8.12□□□□□ -1.11
CCSER1-211ENST00000513522 MYT1Q01538 1121 aa8.11□□□□□ -1.11
CCSER1-211ENST00000513522 DCAF1Q9Y4B6 1507 aa8.11□□□□□ -1.11
CCSER1-211ENST00000513522 NACADO15069 1562 aa8.1□□□□□ -1.11
CCSER1-211ENST00000513522 LRCH3Q96II8 777 aa8.1□□□□□ -1.11
CCSER1-211ENST00000513522 MYO15BQ96JP2 1530 aa8.09□□□□□ -1.11
CCSER1-211ENST00000513522 FAM98CQ17RN3 349 aaKnown RBP8.09□□□□□ -1.11
CCSER1-211ENST00000513522 PCDHGA10Q9Y5H3 936 aa8.09□□□□□ -1.11
CCSER1-211ENST00000513522 STK17AQ9UEE5 414 aa8.08□□□□□ -1.12
CCSER1-211ENST00000513522 RB1CC1Q8TDY2 1594 aa8.06□□□□□ -1.12
CCSER1-211ENST00000513522 PPP4CP60510 307 aa8.06□□□□□ -1.12
CCSER1-211ENST00000513522 PPP1R15BQ5SWA1 713 aa8.06□□□□□ -1.12
CCSER1-211ENST00000513522 IL21Q9HBE4 155 aa8.06□□□□□ -1.12
CCSER1-211ENST00000513522 DGAT1O75907 488 aa8.05□□□□□ -1.12
CCSER1-211ENST00000513522 TRIM67Q6ZTA4 783 aa8.05□□□□□ -1.12
CCSER1-211ENST00000513522 MTRQ99707 1265 aa8.05□□□□□ -1.12
CCSER1-211ENST00000513522 PKDCCQ504Y2 493 aa8.04□□□□□ -1.12
CCSER1-211ENST00000513522 CRISPLD2Q9H0B8 497 aa8.04□□□□□ -1.12
CCSER1-211ENST00000513522 ZNF516Q92618 1163 aa8.03□□□□□ -1.12
CCSER1-211ENST00000513522 FBXW7Q969H0 707 aa8.02□□□□□ -1.13
CCSER1-211ENST00000513522 TRIM6-TRIM34B2RNG4 842 aa8.01□□□□□ -1.13
CCSER1-211ENST00000513522 TYW1BQ6NUM6 668 aa8.01□□□□□ -1.13
CCSER1-211ENST00000513522 ECM2O94769 699 aaPredicted RBP7.99□□□□□ -1.13
CCSER1-211ENST00000513522 MAP3K9P80192 1104 aa7.99□□□□□ -1.13
CCSER1-211ENST00000513522 NKX2-3Q8TAU0 364 aa7.99□□□□□ -1.13
CCSER1-211ENST00000513522 WFS1O76024 890 aa7.98□□□□□ -1.13
CCSER1-211ENST00000513522 C6orf132Q5T0Z8 1188 aa7.98□□□□□ -1.13
CCSER1-211ENST00000513522 RGL2O15211 777 aa7.97□□□□□ -1.13
CCSER1-211ENST00000513522 PHF14O94880 888 aa7.97□□□□□ -1.13
CCSER1-211ENST00000513522 GGCXP38435 758 aa7.96□□□□□ -1.14
CCSER1-211ENST00000513522 WIPF1O43516 503 aa7.95□□□□□ -1.14
CCSER1-211ENST00000513522 INSM1Q01101 510 aaPredicted RBP7.95□□□□□ -1.14
CCSER1-211ENST00000513522 TMUB1Q9BVT8 246 aa7.95□□□□□ -1.14
CCSER1-211ENST00000513522 PRR20EP86478 221 aa7.94□□□□□ -1.14
CCSER1-211ENST00000513522 PRR20CP86479 221 aa7.94□□□□□ -1.14
CCSER1-211ENST00000513522 PRR20DP86480 221 aa7.94□□□□□ -1.14
CCSER1-211ENST00000513522 PRR20BP86481 221 aa7.94□□□□□ -1.14
CCSER1-211ENST00000513522 PRR20AP86496 221 aa7.94□□□□□ -1.14
CCSER1-211ENST00000513522 PDE4AP27815 886 aa7.93□□□□□ -1.14
CCSER1-211ENST00000513522 NCKAP5LQ9HCH0 1330 aa7.93□□□□□ -1.14
CCSER1-211ENST00000513522 SLC19A1P41440 591 aa7.92□□□□□ -1.14
CCSER1-211ENST00000513522 SAMD7Q7Z3H4 446 aa7.92□□□□□ -1.14
CCSER1-211ENST00000513522 EMID1Q96A84 441 aaPredicted RBP7.92□□□□□ -1.14
CCSER1-211ENST00000513522 AAASQ9NRG9 546 aa7.92□□□□□ -1.14
CCSER1-211ENST00000513522 SCRIBQ14160 1630 aa7.92□□□□□ -1.14
CCSER1-211ENST00000513522 ST8SIA5O15466 376 aa7.91□□□□□ -1.14
CCSER1-211ENST00000513522 PACS2Q86VP3 889 aa7.91□□□□□ -1.14
CCSER1-211ENST00000513522 FAM187AA6NFU0 413 aa7.9□□□□□ -1.14
CCSER1-211ENST00000513522 NFX1Q12986 1120 aaKnown RBP7.9□□□□□ -1.14
CCSER1-211ENST00000513522 BICRAQ9NZM4 1560 aa7.89□□□□□ -1.15
CCSER1-211ENST00000513522 SHROOM4Q9ULL8 1493 aa7.89□□□□□ -1.15
CCSER1-211ENST00000513522 SPRYD7Q5W111 196 aa7.89□□□□□ -1.15
CCSER1-211ENST00000513522 ZNF598Q86UK7 904 aaKnown RBP7.89□□□□□ -1.15
CCSER1-211ENST00000513522 EPAS1Q99814 870 aa7.89□□□□□ -1.15
CCSER1-211ENST00000513522 TSKSQ9UJT2 592 aa7.89□□□□□ -1.15
CCSER1-211ENST00000513522 APLP1P51693 650 aa7.88□□□□□ -1.15
CCSER1-211ENST00000513522 EMILIN3Q9NT22 766 aa7.88□□□□□ -1.15
CCSER1-211ENST00000513522 GDF9O60383 454 aa7.85□□□□□ -1.15
CCSER1-211ENST00000513522 UNC13AQ9UPW8 1703 aa7.85□□□□□ -1.15
CCSER1-211ENST00000513522 RNF223E7ERA6 249 aa7.84□□□□□ -1.15
CCSER1-211ENST00000513522 SMAPO00193 183 aa7.84□□□□□ -1.15
CCSER1-211ENST00000513522 SUZ12Q15022 739 aaKnown RBP7.84□□□□□ -1.15
CCSER1-211ENST00000513522 LARP6Q9BRS8 491 aaKnown RBP7.84□□□□□ -1.15
CCSER1-211ENST00000513522 COPS2P61201 443 aa7.83□□□□□ -1.16
CCSER1-211ENST00000513522 RBM33Q96EV2 1170 aaKnown RBP7.83□□□□□ -1.16
CCSER1-211ENST00000513522 DDX27Q96GQ7 796 aaKnown RBP7.83□□□□□ -1.16
CCSER1-211ENST00000513522 DACH1Q9UI36 760 aa7.83□□□□□ -1.16
CCSER1-211ENST00000513522 TNFRSF10AO00220 468 aa7.82□□□□□ -1.16
CCSER1-211ENST00000513522 PKD2Q13563 968 aa7.82□□□□□ -1.16
CCSER1-211ENST00000513522 ZNF697Q5TEC3 545 aa7.82□□□□□ -1.16
CCSER1-211ENST00000513522 C11orf95C9JLR9 678 aaPredicted RBP7.81□□□□□ -1.16
CCSER1-211ENST00000513522 ZPR1O75312 459 aa7.81□□□□□ -1.16
CCSER1-211ENST00000513522 LCE2CQ5TA81 110 aa7.81□□□□□ -1.16
CCSER1-211ENST00000513522 HS6ST3Q8IZP7 471 aa7.81□□□□□ -1.16
CCSER1-211ENST00000513522 LIAT1Q6ZQX7 453 aa7.8□□□□□ -1.16
CCSER1-211ENST00000513522 CRIPAKQ8N1N5 446 aa7.8□□□□□ -1.16
CCSER1-211ENST00000513522 GMPR2Q9P2T1 348 aaKnown RBP7.8□□□□□ -1.16
CCSER1-211ENST00000513522 MFSD10Q14728 455 aa7.79□□□□□ -1.16
CCSER1-211ENST00000513522 C3orf80F5H4A9 247 aa7.78□□□□□ -1.16
CCSER1-211ENST00000513522 FAM198AQ9UFP1 575 aa7.77□□□□□ -1.17
CCSER1-211ENST00000513522 RNF40O75150 1001 aa7.76□□□□□ -1.17
CCSER1-211ENST00000513522 ANKLE1Q8NAG6 615 aa7.76□□□□□ -1.17
CCSER1-211ENST00000513522 TATDN2Q93075 761 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms