RNA–Protein interactions for RNA: ENST00000511633.5

NEK1-207, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 5,536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-207ENST00000511633 LMOD3Q0VAK6 560 aa11.42□□□□□ -0.58
NEK1-207ENST00000511633 PMFBP1Q8TBY8 1022 aa11.41□□□□□ -0.58
NEK1-207ENST00000511633 COG3Q96JB2 828 aa11.41□□□□□ -0.58
NEK1-207ENST00000511633 NCAPD3P42695 1498 aa11.41□□□□□ -0.58
NEK1-207ENST00000511633 GORABQ5T7V8 394 aa11.4□□□□□ -0.58
NEK1-207ENST00000511633 MYOM3Q5VTT5 1437 aa11.4□□□□□ -0.58
NEK1-207ENST00000511633 TAF7LQ5H9L4 462 aa11.4□□□□□ -0.58
NEK1-207ENST00000511633 RBM19Q9Y4C8 960 aaKnown RBP11.4□□□□□ -0.58
NEK1-207ENST00000511633 PHLDB1Q86UU1 1377 aa11.4□□□□□ -0.58
NEK1-207ENST00000511633 CGNL1Q0VF96 1302 aa11.4□□□□□ -0.58
NEK1-207ENST00000511633 CHMP4AQ9BY43 222 aa11.4□□□□□ -0.58
NEK1-207ENST00000511633 ELL2O00472 640 aaPredicted RBP11.39□□□□□ -0.59
NEK1-207ENST00000511633 GNL2Q13823 731 aaKnown RBP11.39□□□□□ -0.59
NEK1-207ENST00000511633 TRIM6-TRIM34B2RNG4 842 aa11.39□□□□□ -0.59
NEK1-207ENST00000511633 FGD6Q6ZV73 1430 aa11.39□□□□□ -0.59
NEK1-207ENST00000511633 MFAP1P55081 439 aaKnown RBP11.38□□□□□ -0.59
NEK1-207ENST00000511633 GOLGA6L6A8MZA4 724 aa11.38□□□□□ -0.59
NEK1-207ENST00000511633 HMMRO75330 724 aa11.38□□□□□ -0.59
NEK1-207ENST00000511633 ERICH6BQ5W0A0 696 aa11.38□□□□□ -0.59
NEK1-207ENST00000511633 PDE3BQ13370 1112 aa11.37□□□□□ -0.59
NEK1-207ENST00000511633 BCL2L13Q9BXK5 485 aa11.37□□□□□ -0.59
NEK1-207ENST00000511633 KIF21BO75037 1637 aa11.37□□□□□ -0.59
NEK1-207ENST00000511633 RTN4Q9NQC3 1192 aaKnown RBP11.37□□□□□ -0.59
NEK1-207ENST00000511633 CUX1P39880 1505 aa11.36□□□□□ -0.59
NEK1-207ENST00000511633 TCERG1O14776 1098 aaKnown RBP11.36□□□□□ -0.59
NEK1-207ENST00000511633 GPATCH3Q96I76 525 aa11.36□□□□□ -0.59
NEK1-207ENST00000511633 SLKQ9H2G2 1235 aaPredicted RBP11.36□□□□□ -0.59
NEK1-207ENST00000511633 TMX4Q9H1E5 349 aaPredicted RBP11.36□□□□□ -0.59
NEK1-207ENST00000511633 PRKRIP1Q9H875 184 aaPredicted RBP11.36□□□□□ -0.59
NEK1-207ENST00000511633 NESP48681 1621 aa11.35□□□□□ -0.59
NEK1-207ENST00000511633 C1orf141Q5JVX7 400 aa11.34□□□□□ -0.59
NEK1-207ENST00000511633 EVA1CP58658 441 aa11.34□□□□□ -0.59
NEK1-207ENST00000511633 GRIN2BQ13224 1484 aa11.34□□□□□ -0.59
NEK1-207ENST00000511633 HDAC5Q9UQL6 1122 aa11.34□□□□□ -0.59
NEK1-207ENST00000511633 LRRC9Q6ZRR7 1453 aa11.34□□□□□ -0.59
NEK1-207ENST00000511633 PLIN1O60240 522 aa11.34□□□□□ -0.59
NEK1-207ENST00000511633 CLSTN1O94985 981 aa11.34□□□□□ -0.59
NEK1-207ENST00000511633 NAP1L5Q96NT1 182 aaPredicted RBP11.33□□□□□ -0.6
NEK1-207ENST00000511633 NCOA2Q15596 1464 aa11.33□□□□□ -0.6
NEK1-207ENST00000511633 ARHGAP5Q13017 1502 aa11.33□□□□□ -0.6
NEK1-207ENST00000511633 GTF2E1P29083 439 aaPredicted RBP11.32□□□□□ -0.6
NEK1-207ENST00000511633 NOL8Q76FK4 1167 aaKnown RBP11.32□□□□□ -0.6
NEK1-207ENST00000511633 HSP90B1P14625 803 aaKnown RBP11.32□□□□□ -0.6
NEK1-207ENST00000511633 PSME1Q06323 249 aa11.32□□□□□ -0.6
NEK1-207ENST00000511633 CASKIN1Q8WXD9 1431 aa11.32□□□□□ -0.6
NEK1-207ENST00000511633 APAF1O14727 1248 aa11.31□□□□□ -0.6
NEK1-207ENST00000511633 DRC7Q8IY82 874 aa11.31□□□□□ -0.6
NEK1-207ENST00000511633 ANKRD50Q9ULJ7 1429 aa11.31□□□□□ -0.6
NEK1-207ENST00000511633 NRDCO43847 1150 aa11.31□□□□□ -0.6
NEK1-207ENST00000511633 AFAP1Q8N556 730 aa11.31□□□□□ -0.6
NEK1-207ENST00000511633 TEFQ10587 303 aa11.31□□□□□ -0.6
NEK1-207ENST00000511633 PRG4Q92954 1404 aaPredicted RBP11.31□□□□□ -0.6
NEK1-207ENST00000511633 DIAPH1O60610 1272 aaKnown RBP11.31□□□□□ -0.6
NEK1-207ENST00000511633 NGEFQ8N5V2 710 aa11.31□□□□□ -0.6
NEK1-207ENST00000511633 E9PSI1 815 aa11.3□□□□□ -0.6
NEK1-207ENST00000511633 G3V3G9 751 aa11.3□□□□□ -0.6
NEK1-207ENST00000511633 DCAF8Q5TAQ9 597 aa11.3□□□□□ -0.6
NEK1-207ENST00000511633 FOXD4L1Q9NU39 408 aa11.3□□□□□ -0.6
NEK1-207ENST00000511633 FYCO1Q9BQS8 1478 aa11.3□□□□□ -0.6
NEK1-207ENST00000511633 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.3□□□□□ -0.6
NEK1-207ENST00000511633 GBP4Q96PP9 640 aa11.3□□□□□ -0.6
NEK1-207ENST00000511633 GZF1Q9H116 711 aaPredicted RBP11.3□□□□□ -0.6
NEK1-207ENST00000511633 SYNJ1O43426 1573 aa11.3□□□□□ -0.6
NEK1-207ENST00000511633 EIF2S2P20042 333 aaKnown RBP11.3□□□□□ -0.6
NEK1-207ENST00000511633 FRAT2O75474 233 aaPredicted RBP11.29□□□□□ -0.6
NEK1-207ENST00000511633 TMEM132EQ6IEE7 984 aa11.29□□□□□ -0.6
NEK1-207ENST00000511633 NECTIN2Q92692 538 aa11.29□□□□□ -0.6
NEK1-207ENST00000511633 CFTRP13569 1480 aa11.29□□□□□ -0.6
NEK1-207ENST00000511633 MRC2Q9UBG0 1479 aa11.28□□□□□ -0.6
NEK1-207ENST00000511633 ZKSCAN2Q63HK3 967 aa11.28□□□□□ -0.6
NEK1-207ENST00000511633 TTC5Q8N0Z6 440 aa11.28□□□□□ -0.6
NEK1-207ENST00000511633 CABP2Q9NPB3 220 aa11.28□□□□□ -0.6
NEK1-207ENST00000511633 CC2D2AQ9P2K1 1620 aa11.27□□□□□ -0.6
NEK1-207ENST00000511633 RIPK4P57078 832 aa11.27□□□□□ -0.6
NEK1-207ENST00000511633 L1TD1Q5T7N2 865 aaKnown RBP11.27□□□□□ -0.6
NEK1-207ENST00000511633 SYNJ2O15056 1496 aa11.27□□□□□ -0.6
NEK1-207ENST00000511633 ANKRD45Q5TZF3 282 aa11.27□□□□□ -0.61
NEK1-207ENST00000511633 TOMM22Q9NS69 142 aa11.27□□□□□ -0.61
NEK1-207ENST00000511633 COG6Q9Y2V7 657 aa11.27□□□□□ -0.61
NEK1-207ENST00000511633 EXOC6Q8TAG9 804 aa11.27□□□□□ -0.61
NEK1-207ENST00000511633 CRBNQ96SW2 442 aa11.27□□□□□ -0.61
NEK1-207ENST00000511633 NUTM2GQ5VZR2 741 aa11.26□□□□□ -0.61
NEK1-207ENST00000511633 RILPL2Q969X0 211 aa11.26□□□□□ -0.61
NEK1-207ENST00000511633 KIF7Q2M1P5 1343 aa11.26□□□□□ -0.61
NEK1-207ENST00000511633 ARAP1Q96P48 1450 aa11.26□□□□□ -0.61
NEK1-207ENST00000511633 RRP1P56182 461 aaKnown RBP11.26□□□□□ -0.61
NEK1-207ENST00000511633 SYTL4Q96C24 671 aaPredicted RBP11.25□□□□□ -0.61
NEK1-207ENST00000511633 GGNBP2Q9H3C7 697 aa11.25□□□□□ -0.61
NEK1-207ENST00000511633 ZBED9Q6R2W3 1325 aa11.25□□□□□ -0.61
NEK1-207ENST00000511633 MSNP26038 577 aaKnown RBP11.25□□□□□ -0.61
NEK1-207ENST00000511633 HMOX1P09601 288 aa11.25□□□□□ -0.61
NEK1-207ENST00000511633 DEKP35659 375 aaKnown RBP11.25□□□□□ -0.61
NEK1-207ENST00000511633 CCDC7Q96M83 1385 aa11.24□□□□□ -0.61
NEK1-207ENST00000511633 MSH5O43196 834 aa11.24□□□□□ -0.61
NEK1-207ENST00000511633 HTATSF1O43719 755 aaKnown RBP11.24□□□□□ -0.61
NEK1-207ENST00000511633 ERICH3Q5RHP9 1530 aa11.24□□□□□ -0.61
NEK1-207ENST00000511633 IFT140Q96RY7 1462 aa11.24□□□□□ -0.61
NEK1-207ENST00000511633 CENPQQ7L2Z9 268 aaPredicted RBP11.24□□□□□ -0.61
NEK1-207ENST00000511633 ATF3P18847 181 aa11.23□□□□□ -0.61
NEK1-207ENST00000511633 TSHZ2Q9NRE2 1034 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms