RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 ZNF428Q96B54 188 aa5.27□□□□□ -1.57
NEDD4-209ENST00000508871 NEFMP07197 916 aa5.27□□□□□ -1.57
NEDD4-209ENST00000508871 BCCIPQ9P287 314 aaKnown RBP eCLIP5.27□□□□□ -1.57
NEDD4-209ENST00000508871 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.27□□□□□ -1.57
NEDD4-209ENST00000508871 ARHGEF11O15085 1522 aa5.27□□□□□ -1.57
NEDD4-209ENST00000508871 IBSPP21815 317 aaPredicted RBP5.26□□□□□ -1.57
NEDD4-209ENST00000508871 PATL2C9JE40 543 aaKnown RBP5.26□□□□□ -1.57
NEDD4-209ENST00000508871 PLCD4Q9BRC7 762 aa5.26□□□□□ -1.57
NEDD4-209ENST00000508871 ZNF219Q9P2Y4 722 aaPredicted RBP5.26□□□□□ -1.57
NEDD4-209ENST00000508871 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.26□□□□□ -1.57
NEDD4-209ENST00000508871 LRRC9Q6ZRR7 1453 aa5.26□□□□□ -1.57
NEDD4-209ENST00000508871 CLASP1Q7Z460 1538 aa5.25□□□□□ -1.57
NEDD4-209ENST00000508871 ZNF608Q9ULD9 1512 aaPredicted RBP5.25□□□□□ -1.57
NEDD4-209ENST00000508871 FOSBP53539 338 aa5.25□□□□□ -1.57
NEDD4-209ENST00000508871 CALR3Q96L12 384 aaKnown RBP5.25□□□□□ -1.57
NEDD4-209ENST00000508871 SERPINA10Q9UK55 444 aa5.25□□□□□ -1.57
NEDD4-209ENST00000508871 DNAJC5BQ9UF47 199 aa5.25□□□□□ -1.57
NEDD4-209ENST00000508871 STAG3Q9UJ98 1225 aa5.25□□□□□ -1.57
NEDD4-209ENST00000508871 ZC3H15Q8WU90 426 aaKnown RBP5.25□□□□□ -1.57
NEDD4-209ENST00000508871 AK7Q96M32 723 aa5.25□□□□□ -1.57
NEDD4-209ENST00000508871 BIN2Q9UBW5 565 aaPredicted RBP5.24□□□□□ -1.57
NEDD4-209ENST00000508871 CROCC2H7BZ55 1655 aa5.24□□□□□ -1.57
NEDD4-209ENST00000508871 ANKRD62A6NC57 917 aa5.24□□□□□ -1.57
NEDD4-209ENST00000508871 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.24□□□□□ -1.57
NEDD4-209ENST00000508871 GPIHBP1Q8IV16 184 aa5.24□□□□□ -1.57
NEDD4-209ENST00000508871 GCC2Q8IWJ2 1684 aa5.24□□□□□ -1.57
NEDD4-209ENST00000508871 DISP1Q96F81 1524 aa5.24□□□□□ -1.57
NEDD4-209ENST00000508871 ABCA8O94911 1581 aa5.24□□□□□ -1.57
NEDD4-209ENST00000508871 ADGBQ8N7X0 1667 aa5.24□□□□□ -1.57
NEDD4-209ENST00000508871 ANKRD13AQ8IZ07 590 aa5.24□□□□□ -1.57
NEDD4-209ENST00000508871 NUTM2FA1L443 756 aa5.24□□□□□ -1.57
NEDD4-209ENST00000508871 BCL11BQ9C0K0 894 aaPredicted RBP5.24□□□□□ -1.57
NEDD4-209ENST00000508871 GSE1Q14687 1217 aa5.23□□□□□ -1.57
NEDD4-209ENST00000508871 FAM177A1Q8N128 213 aaPredicted RBP5.23□□□□□ -1.57
NEDD4-209ENST00000508871 CLUAP1Q96AJ1 413 aa5.23□□□□□ -1.57
NEDD4-209ENST00000508871 TDRD9Q8NDG6 1382 aaKnown RBP5.23□□□□□ -1.57
NEDD4-209ENST00000508871 SLC4A2P04920 1241 aa5.23□□□□□ -1.57
NEDD4-209ENST00000508871 PAF1Q8N7H5 531 aa5.23□□□□□ -1.57
NEDD4-209ENST00000508871 TCOF1Q13428 1488 aaKnown RBP5.23□□□□□ -1.57
NEDD4-209ENST00000508871 ZNF692Q9BU19 519 aaPredicted RBP5.22□□□□□ -1.57
NEDD4-209ENST00000508871 MYH16Q9H6N6 1097 aa5.22□□□□□ -1.57
NEDD4-209ENST00000508871 ZNF330Q9Y3S2 320 aaPredicted RBP5.22□□□□□ -1.57
NEDD4-209ENST00000508871 SOX12O15370 315 aa5.21□□□□□ -1.57
NEDD4-209ENST00000508871 IRX6P78412 446 aaPredicted RBP5.21□□□□□ -1.57
NEDD4-209ENST00000508871 WDR78Q5VTH9 848 aa5.21□□□□□ -1.57
NEDD4-209ENST00000508871 HS6ST3Q8IZP7 471 aa5.21□□□□□ -1.58
NEDD4-209ENST00000508871 CARMIL2Q6F5E8 1435 aa5.21□□□□□ -1.58
NEDD4-209ENST00000508871 ANP32CO43423 234 aa5.21□□□□□ -1.58
NEDD4-209ENST00000508871 ANAPC15P60006 121 aa5.21□□□□□ -1.58
NEDD4-209ENST00000508871 NECTIN2Q92692 538 aa5.2□□□□□ -1.58
NEDD4-209ENST00000508871 KDM4CQ9H3R0 1056 aa5.2□□□□□ -1.58
NEDD4-209ENST00000508871 PKNOX2Q96KN3 472 aa5.2□□□□□ -1.58
NEDD4-209ENST00000508871 PTPN23Q9H3S7 1636 aa5.2□□□□□ -1.58
NEDD4-209ENST00000508871 MKRN3Q13064 507 aaKnown RBP5.2□□□□□ -1.58
NEDD4-209ENST00000508871 FHOD3Q2V2M9 1422 aa5.2□□□□□ -1.58
NEDD4-209ENST00000508871 SMARCA5O60264 1052 aaPredicted RBP5.2□□□□□ -1.58
NEDD4-209ENST00000508871 CAPN15O75808 1086 aa5.2□□□□□ -1.58
NEDD4-209ENST00000508871 RETREG2Q8NC44 543 aa5.2□□□□□ -1.58
NEDD4-209ENST00000508871 EPRSP07814 1512 aaKnown RBP5.2□□□□□ -1.58
NEDD4-209ENST00000508871 KIF14Q15058 1648 aa5.2□□□□□ -1.58
NEDD4-209ENST00000508871 UHRF1BP1LA0JNW5 1464 aa5.2□□□□□ -1.58
NEDD4-209ENST00000508871 KDM4AO75164 1064 aa5.19□□□□□ -1.58
NEDD4-209ENST00000508871 DDRGK1Q96HY6 314 aa5.19□□□□□ -1.58
NEDD4-209ENST00000508871 OS9Q13438 667 aaPredicted RBP5.19□□□□□ -1.58
NEDD4-209ENST00000508871 FAM212AQ96EL1 285 aa5.19□□□□□ -1.58
NEDD4-209ENST00000508871 KCNV2Q8TDN2 545 aa5.19□□□□□ -1.58
NEDD4-209ENST00000508871 AKNAQ7Z591 1439 aa5.18□□□□□ -1.58
NEDD4-209ENST00000508871 DNMT1P26358 1616 aaKnown RBP5.18□□□□□ -1.58
NEDD4-209ENST00000508871 RIOK3O14730 519 aaKnown RBP5.18□□□□□ -1.58
NEDD4-209ENST00000508871 PTMAP06454 111 aaKnown RBP5.18□□□□□ -1.58
NEDD4-209ENST00000508871 ANP32EQ9BTT0 268 aa5.18□□□□□ -1.58
NEDD4-209ENST00000508871 MIA2Q96PC5 1412 aa5.18□□□□□ -1.58
NEDD4-209ENST00000508871 SEMA3EO15041 775 aa5.18□□□□□ -1.58
NEDD4-209ENST00000508871 PREX2Q70Z35 1606 aa5.18□□□□□ -1.58
NEDD4-209ENST00000508871 FAM50AQ14320 339 aaKnown RBP5.18□□□□□ -1.58
NEDD4-209ENST00000508871 TICAM2Q86XR7 235 aa5.17□□□□□ -1.58
NEDD4-209ENST00000508871 ABL2P42684 1182 aa5.17□□□□□ -1.58
NEDD4-209ENST00000508871 CDC42BPAQ5VT25 1732 aa5.17□□□□□ -1.58
NEDD4-209ENST00000508871 VGFO15240 615 aaPredicted RBP5.17□□□□□ -1.58
NEDD4-209ENST00000508871 NPHP1O15259 732 aa5.17□□□□□ -1.58
NEDD4-209ENST00000508871 E2F4Q16254 413 aa5.17□□□□□ -1.58
NEDD4-209ENST00000508871 ARHGEF5Q12774 1597 aa5.17□□□□□ -1.58
NEDD4-209ENST00000508871 PRPF38AQ8NAV1 312 aaKnown RBP5.16□□□□□ -1.58
NEDD4-209ENST00000508871 NUP153P49790 1475 aaKnown RBP5.16□□□□□ -1.58
NEDD4-209ENST00000508871 CENPBP07199 599 aaPredicted RBP5.16□□□□□ -1.58
NEDD4-209ENST00000508871 GOLGA2Q08379 1002 aa5.16□□□□□ -1.58
NEDD4-209ENST00000508871 PCGF6Q9BYE7 350 aa5.16□□□□□ -1.58
NEDD4-209ENST00000508871 MYO5CQ9NQX4 1742 aa5.16□□□□□ -1.58
NEDD4-209ENST00000508871 CFAP74Q9C0B2 1584 aa5.16□□□□□ -1.58
NEDD4-209ENST00000508871 MAST1Q9Y2H9 1570 aa5.16□□□□□ -1.58
NEDD4-209ENST00000508871 MAGI3Q5TCQ9 1506 aa5.16□□□□□ -1.58
NEDD4-209ENST00000508871 NCOA2Q15596 1464 aa5.16□□□□□ -1.58
NEDD4-209ENST00000508871 ARAP3Q8WWN8 1544 aa5.16□□□□□ -1.58
NEDD4-209ENST00000508871 ABCC2Q92887 1545 aa5.16□□□□□ -1.58
NEDD4-209ENST00000508871 MYOM3Q5VTT5 1437 aa5.16□□□□□ -1.58
NEDD4-209ENST00000508871 FAM9BQ8IZU0 186 aa5.16□□□□□ -1.58
NEDD4-209ENST00000508871 CCNB3Q8WWL7 1395 aa5.16□□□□□ -1.58
NEDD4-209ENST00000508871 AXDND1Q5T1B0 1012 aaPredicted RBP5.16□□□□□ -1.58
NEDD4-209ENST00000508871 ZCCHC11Q5TAX3 1644 aaKnown RBP5.15□□□□□ -1.58
NEDD4-209ENST00000508871 CANXP27824 592 aaKnown RBP5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms