RNA–Protein interactions for RNA: ENST00000508550.5

CCSER1-207, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 3

Gene CCSER1, Length 716 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-207ENST00000508550 MAP3K1Q13233 1512 aa12.5□□□□□ -0.41
CCSER1-207ENST00000508550 ADAMTS12P58397 1594 aa12.5□□□□□ -0.41
CCSER1-207ENST00000508550 SYNJ2O15056 1496 aa12.49□□□□□ -0.41
CCSER1-207ENST00000508550 HS6ST3Q8IZP7 471 aa12.49□□□□□ -0.41
CCSER1-207ENST00000508550 KIAA0586Q9BVV6 1533 aa12.47□□□□□ -0.41
CCSER1-207ENST00000508550 ARAP1Q96P48 1450 aa12.47□□□□□ -0.41
CCSER1-207ENST00000508550 FMN1Q68DA7 1419 aa12.46□□□□□ -0.41
CCSER1-207ENST00000508550 ERBB3P21860 1342 aa12.46□□□□□ -0.41
CCSER1-207ENST00000508550 MMRN1Q13201 1228 aa12.46□□□□□ -0.41
CCSER1-207ENST00000508550 EIF4G3O43432 1585 aaKnown RBP12.46□□□□□ -0.42
CCSER1-207ENST00000508550 C2orf72A6NCS6 295 aa12.45□□□□□ -0.42
CCSER1-207ENST00000508550 PPP1R37O75864 691 aa12.45□□□□□ -0.42
CCSER1-207ENST00000508550 GRIN2AQ12879 1464 aa12.45□□□□□ -0.42
CCSER1-207ENST00000508550 SNAPC4Q5SXM2 1469 aa12.45□□□□□ -0.42
CCSER1-207ENST00000508550 PBRM1Q86U86 1689 aa12.45□□□□□ -0.42
CCSER1-207ENST00000508550 CHMP7Q8WUX9 453 aaPredicted RBP12.43□□□□□ -0.42
CCSER1-207ENST00000508550 DNAJC5Q9H3Z4 198 aa12.43□□□□□ -0.42
CCSER1-207ENST00000508550 NUP160Q12769 1436 aa12.43□□□□□ -0.42
CCSER1-207ENST00000508550 UGGT2Q9NYU1 1516 aa12.42□□□□□ -0.42
CCSER1-207ENST00000508550 ARSIQ5FYB1 569 aa12.41□□□□□ -0.42
CCSER1-207ENST00000508550 CASKIN1Q8WXD9 1431 aa12.4□□□□□ -0.42
CCSER1-207ENST00000508550 SAMD9Q5K651 1589 aa12.39□□□□□ -0.43
CCSER1-207ENST00000508550 VARS2Q5ST30 1063 aaKnown RBP12.39□□□□□ -0.43
CCSER1-207ENST00000508550 IQGAP2Q13576 1575 aa12.39□□□□□ -0.43
CCSER1-207ENST00000508550 CTTNBP2Q8WZ74 1663 aa12.38□□□□□ -0.43
CCSER1-207ENST00000508550 SLC34A2O95436 690 aa12.38□□□□□ -0.43
CCSER1-207ENST00000508550 PCGF6Q9BYE7 350 aa12.38□□□□□ -0.43
CCSER1-207ENST00000508550 FYCO1Q9BQS8 1478 aa12.38□□□□□ -0.43
CCSER1-207ENST00000508550 CHGAP10645 457 aaKnown RBP12.37□□□□□ -0.43
CCSER1-207ENST00000508550 ZNF687Q8N1G0 1237 aa12.37□□□□□ -0.43
CCSER1-207ENST00000508550 TMC2Q8TDI7 906 aa12.36□□□□□ -0.43
CCSER1-207ENST00000508550 KHSRPQ92945 711 aaKnown RBP eCLIP12.33□□□□□ -0.44
CCSER1-207ENST00000508550 CARMIL2Q6F5E8 1435 aa12.33□□□□□ -0.44
CCSER1-207ENST00000508550 ZNF316A6NFI3 1004 aaPredicted RBP12.32□□□□□ -0.44
CCSER1-207ENST00000508550 NKX1-1Q15270 411 aaPredicted RBP12.32□□□□□ -0.44
CCSER1-207ENST00000508550 JPH4Q96JJ6 628 aa12.32□□□□□ -0.44
CCSER1-207ENST00000508550 FHOD3Q2V2M9 1422 aa12.31□□□□□ -0.44
CCSER1-207ENST00000508550 RANGAP1P46060 587 aaPredicted RBP12.3□□□□□ -0.44
CCSER1-207ENST00000508550 CCDC18Q5T9S5 1454 aa12.29□□□□□ -0.44
CCSER1-207ENST00000508550 DISP1Q96F81 1524 aa12.29□□□□□ -0.44
CCSER1-207ENST00000508550 GPHNQ9NQX3 736 aaPredicted RBP12.28□□□□□ -0.44
CCSER1-207ENST00000508550 PCDHGA4Q9Y5G9 962 aa12.28□□□□□ -0.44
CCSER1-207ENST00000508550 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.28□□□□□ -0.44
CCSER1-207ENST00000508550 LRRC9Q6ZRR7 1453 aa12.27□□□□□ -0.44
CCSER1-207ENST00000508550 CEP170Q5SW79 1584 aa12.27□□□□□ -0.44
CCSER1-207ENST00000508550 RYDENQ9NUL5 291 aaKnown RBP12.27□□□□□ -0.45
CCSER1-207ENST00000508550 TIAM1Q13009 1591 aa12.26□□□□□ -0.45
CCSER1-207ENST00000508550 FOXK1P85037 733 aa12.26□□□□□ -0.45
CCSER1-207ENST00000508550 RRBP1Q9P2E9 1410 aaKnown RBP12.26□□□□□ -0.45
CCSER1-207ENST00000508550 KIAA0556O60303 1618 aa12.24□□□□□ -0.45
CCSER1-207ENST00000508550 NUDT7P0C024 238 aa12.24□□□□□ -0.45
CCSER1-207ENST00000508550 KDM4FA0A1W2PPD8 638 aa12.23□□□□□ -0.45
CCSER1-207ENST00000508550 KANK4Q5T7N3 995 aaPredicted RBP12.23□□□□□ -0.45
CCSER1-207ENST00000508550 P3H3Q8IVL6 736 aa12.23□□□□□ -0.45
CCSER1-207ENST00000508550 PTCD2Q8WV60 388 aaKnown RBP12.23□□□□□ -0.45
CCSER1-207ENST00000508550 CDK11AQ9UQ88 783 aaPredicted RBP12.23□□□□□ -0.45
CCSER1-207ENST00000508550 PCF11O94913 1555 aaKnown RBP12.21□□□□□ -0.46
CCSER1-207ENST00000508550 ZEB1P37275 1124 aaPredicted RBP12.2□□□□□ -0.46
CCSER1-207ENST00000508550 PLPP6Q8IY26 295 aa12.2□□□□□ -0.46
CCSER1-207ENST00000508550 LHX6Q9UPM6 363 aa12.2□□□□□ -0.46
CCSER1-207ENST00000508550 HECW1Q76N89 1606 aa12.19□□□□□ -0.46
CCSER1-207ENST00000508550 DSG2Q14126 1118 aa12.19□□□□□ -0.46
CCSER1-207ENST00000508550 CCNB3Q8WWL7 1395 aa12.18□□□□□ -0.46
CCSER1-207ENST00000508550 CFAP43Q8NDM7 1665 aa12.18□□□□□ -0.46
CCSER1-207ENST00000508550 MTUS2Q5JR59 1369 aa12.18□□□□□ -0.46
CCSER1-207ENST00000508550 EPRSP07814 1512 aaKnown RBP12.17□□□□□ -0.46
CCSER1-207ENST00000508550 SHROOM2Q13796 1616 aa12.17□□□□□ -0.46
CCSER1-207ENST00000508550 PRG4Q92954 1404 aaPredicted RBP12.17□□□□□ -0.46
CCSER1-207ENST00000508550 HRCP23327 699 aa12.16□□□□□ -0.46
CCSER1-207ENST00000508550 PBX2P40425 430 aa12.16□□□□□ -0.46
CCSER1-207ENST00000508550 PPARGC1BQ86YN6 1023 aaKnown RBP12.16□□□□□ -0.46
CCSER1-207ENST00000508550 EHBP1L1Q8N3D4 1523 aa12.16□□□□□ -0.46
CCSER1-207ENST00000508550 PTPRGP23470 1445 aa12.15□□□□□ -0.46
CCSER1-207ENST00000508550 GTPBP6O43824 516 aaPredicted RBP12.15□□□□□ -0.46
CCSER1-207ENST00000508550 CRISPLD2Q9H0B8 497 aa12.15□□□□□ -0.46
CCSER1-207ENST00000508550 CLASP1Q7Z460 1538 aa12.15□□□□□ -0.46
CCSER1-207ENST00000508550 ACIN1Q9UKV3 1341 aaKnown RBP12.14□□□□□ -0.47
CCSER1-207ENST00000508550 PTGER2P43116 358 aa12.14□□□□□ -0.47
CCSER1-207ENST00000508550 ARHGEF11O15085 1522 aa12.14□□□□□ -0.47
CCSER1-207ENST00000508550 MIA2Q96PC5 1412 aa12.13□□□□□ -0.47
CCSER1-207ENST00000508550 PSDA5PKW4 1024 aaPredicted RBP12.13□□□□□ -0.47
CCSER1-207ENST00000508550 LSM11P83369 360 aaKnown RBP eCLIP12.13□□□□□ -0.47
CCSER1-207ENST00000508550 POTEEQ6S8J3 1075 aa12.13□□□□□ -0.47
CCSER1-207ENST00000508550 NUP153P49790 1475 aaKnown RBP12.13□□□□□ -0.47
CCSER1-207ENST00000508550 ATP1B4Q9UN42 357 aaPredicted RBP12.12□□□□□ -0.47
CCSER1-207ENST00000508550 ABCA8O94911 1581 aa12.11□□□□□ -0.47
CCSER1-207ENST00000508550 PHLDB1Q86UU1 1377 aa12.11□□□□□ -0.47
CCSER1-207ENST00000508550 TBC1D12O60347 775 aa12.11□□□□□ -0.47
CCSER1-207ENST00000508550 MYT1LQ9UL68 1186 aa12.11□□□□□ -0.47
CCSER1-207ENST00000508550 RAPGEF6Q8TEU7 1601 aa12.11□□□□□ -0.47
CCSER1-207ENST00000508550 UHRF1BP1LA0JNW5 1464 aa12.1□□□□□ -0.47
CCSER1-207ENST00000508550 ANKRD13DQ6ZTN6 518 aa12.1□□□□□ -0.47
CCSER1-207ENST00000508550 RNF166Q96A37 237 aaPredicted RBP12.1□□□□□ -0.47
CCSER1-207ENST00000508550 UACAQ9BZF9 1416 aa12.1□□□□□ -0.47
CCSER1-207ENST00000508550 CLSPNQ9HAW4 1339 aa12.1□□□□□ -0.47
CCSER1-207ENST00000508550 OXER1Q8TDS5 423 aa12.09□□□□□ -0.47
CCSER1-207ENST00000508550 TROQ12816 1431 aaPredicted RBP12.09□□□□□ -0.47
CCSER1-207ENST00000508550 MYOM3Q5VTT5 1437 aa12.09□□□□□ -0.47
CCSER1-207ENST00000508550 NCKAP5LQ9HCH0 1330 aa12.08□□□□□ -0.48
CCSER1-207ENST00000508550 NCOA2Q15596 1464 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms