RNA–Protein interactions for RNA: ENST00000508236.1

CCDC149-206, Transcript of coiled-coil domain containing 149, humanhuman

TSL 4

Gene CCDC149, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-206ENST00000508236 UPF1Q92900 1129 aaKnown RBP eCLIP12.29□□□□□ -0.44
CCDC149-206ENST00000508236 MCM6Q14566 821 aa12.28□□□□□ -0.44
CCDC149-206ENST00000508236 SH3D19Q5HYK7 790 aa12.28□□□□□ -0.44
CCDC149-206ENST00000508236 CCDC88BA6NC98 1476 aa12.27□□□□□ -0.44
CCDC149-206ENST00000508236 PDCD7Q8N8D1 485 aaKnown RBP12.27□□□□□ -0.45
CCDC149-206ENST00000508236 REPIN1Q9BWE0 567 aaKnown RBP12.27□□□□□ -0.45
CCDC149-206ENST00000508236 TMEM121BQ9BXQ6 578 aaPredicted RBP12.27□□□□□ -0.45
CCDC149-206ENST00000508236 OXER1Q8TDS5 423 aa12.26□□□□□ -0.45
CCDC149-206ENST00000508236 PRIM1P49642 420 aaKnown RBP12.25□□□□□ -0.45
CCDC149-206ENST00000508236 BOLA1Q9Y3E2 137 aa12.25□□□□□ -0.45
CCDC149-206ENST00000508236 PEG3Q9GZU2 1588 aa12.25□□□□□ -0.45
CCDC149-206ENST00000508236 FAM9AQ8IZU1 332 aaPredicted RBP12.24□□□□□ -0.45
CCDC149-206ENST00000508236 TBC1D12O60347 775 aa12.23□□□□□ -0.45
CCDC149-206ENST00000508236 CCDC9Q9Y3X0 531 aaKnown RBP12.23□□□□□ -0.45
CCDC149-206ENST00000508236 NECTIN2Q92692 538 aa12.22□□□□□ -0.45
CCDC149-206ENST00000508236 G3V3G9 751 aa12.21□□□□□ -0.45
CCDC149-206ENST00000508236 CLCN1P35523 988 aa12.21□□□□□ -0.45
CCDC149-206ENST00000508236 PROSER2Q86WR7 435 aaPredicted RBP12.21□□□□□ -0.45
CCDC149-206ENST00000508236 TMUB1Q9BVT8 246 aa12.21□□□□□ -0.45
CCDC149-206ENST00000508236 SKIV2LQ15477 1246 aaKnown RBP12.2□□□□□ -0.46
CCDC149-206ENST00000508236 ZNF777Q9ULD5 760 aaPredicted RBP12.2□□□□□ -0.46
CCDC149-206ENST00000508236 EVI5O60447 810 aa12.19□□□□□ -0.46
CCDC149-206ENST00000508236 GPCPD1Q9NPB8 672 aa12.18□□□□□ -0.46
CCDC149-206ENST00000508236 C19orf67A6NJJ6 358 aa12.16□□□□□ -0.46
CCDC149-206ENST00000508236 RAD21O60216 631 aa12.16□□□□□ -0.46
CCDC149-206ENST00000508236 FNBP4Q8N3X1 1017 aaPredicted RBP12.16□□□□□ -0.46
CCDC149-206ENST00000508236 ABCC8Q09428 1581 aa12.15□□□□□ -0.46
CCDC149-206ENST00000508236 SSTR3P32745 418 aaPredicted RBP12.15□□□□□ -0.46
CCDC149-206ENST00000508236 IRX5P78411 483 aaPredicted RBP12.15□□□□□ -0.46
CCDC149-206ENST00000508236 MDM2Q00987 491 aaPredicted RBP12.15□□□□□ -0.46
CCDC149-206ENST00000508236 OCEL1Q9H607 264 aa12.15□□□□□ -0.46
CCDC149-206ENST00000508236 SERPINA10Q9UK55 444 aa12.15□□□□□ -0.46
CCDC149-206ENST00000508236 POM121Q96HA1 1249 aa12.14□□□□□ -0.47
CCDC149-206ENST00000508236 ATP1B4Q9UN42 357 aaPredicted RBP12.14□□□□□ -0.47
CCDC149-206ENST00000508236 CCDC97Q96F63 343 aaPredicted RBP12.13□□□□□ -0.47
CCDC149-206ENST00000508236 PROCA1Q8NCQ7 364 aaPredicted RBP12.12□□□□□ -0.47
CCDC149-206ENST00000508236 TRAIPQ9BWF2 469 aa12.12□□□□□ -0.47
CCDC149-206ENST00000508236 NPDC1Q9NQX5 325 aaPredicted RBP12.12□□□□□ -0.47
CCDC149-206ENST00000508236 EEA1Q15075 1411 aa12.11□□□□□ -0.47
CCDC149-206ENST00000508236 BEGAINQ9BUH8 593 aa12.11□□□□□ -0.47
CCDC149-206ENST00000508236 CDHR5Q9HBB8 845 aa12.11□□□□□ -0.47
CCDC149-206ENST00000508236 GALR2O43603 387 aaPredicted RBP12.1□□□□□ -0.47
CCDC149-206ENST00000508236 TMEM92Q6UXU6 159 aa12.1□□□□□ -0.47
CCDC149-206ENST00000508236 PHOX2BQ99453 314 aa12.1□□□□□ -0.47
CCDC149-206ENST00000508236 ATAD2BQ9ULI0 1458 aa12.09□□□□□ -0.47
CCDC149-206ENST00000508236 EN1Q05925 392 aaPredicted RBP12.09□□□□□ -0.47
CCDC149-206ENST00000508236 ATN1P54259 1190 aaPredicted RBP12.08□□□□□ -0.48
CCDC149-206ENST00000508236 IER5LQ5T953 404 aa12.08□□□□□ -0.48
CCDC149-206ENST00000508236 POLR3EQ9NVU0 708 aa12.08□□□□□ -0.48
CCDC149-206ENST00000508236 SPDYE5A6NIY4 337 aa12.07□□□□□ -0.48
CCDC149-206ENST00000508236 ZEB1P37275 1124 aaPredicted RBP12.07□□□□□ -0.48
CCDC149-206ENST00000508236 L3MBTL3Q96JM7 780 aaPredicted RBP12.07□□□□□ -0.48
CCDC149-206ENST00000508236 KCTD17Q8N5Z5 321 aa12.06□□□□□ -0.48
CCDC149-206ENST00000508236 ANO8Q9HCE9 1232 aaPredicted RBP12.06□□□□□ -0.48
CCDC149-206ENST00000508236 FAM217BQ9NTX9 383 aaPredicted RBP12.06□□□□□ -0.48
CCDC149-206ENST00000508236 BAZ1BQ9UIG0 1483 aaKnown RBP12.06□□□□□ -0.48
CCDC149-206ENST00000508236 MAP3K7O43318 606 aa12.05□□□□□ -0.48
CCDC149-206ENST00000508236 EPAS1Q99814 870 aa12.05□□□□□ -0.48
CCDC149-206ENST00000508236 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.05□□□□□ -0.48
CCDC149-206ENST00000508236 COG6Q9Y2V7 657 aa12.05□□□□□ -0.48
CCDC149-206ENST00000508236 PHF14O94880 888 aa12.04□□□□□ -0.48
CCDC149-206ENST00000508236 PTCD2Q8WV60 388 aaKnown RBP12.04□□□□□ -0.48
CCDC149-206ENST00000508236 PLCG2P16885 1265 aa12.03□□□□□ -0.48
CCDC149-206ENST00000508236 PLSCR2Q9NRY7 297 aa12.03□□□□□ -0.48
CCDC149-206ENST00000508236 MYSM1Q5VVJ2 828 aa12.02□□□□□ -0.49
CCDC149-206ENST00000508236 BANK1Q8NDB2 785 aa12.02□□□□□ -0.49
CCDC149-206ENST00000508236 WRNQ14191 1432 aaPredicted RBP eCLIP12.02□□□□□ -0.49
CCDC149-206ENST00000508236 ATMINO43313 823 aaPredicted RBP12□□□□□ -0.49
CCDC149-206ENST00000508236 CLK2P49760 499 aaKnown RBP12□□□□□ -0.49
CCDC149-206ENST00000508236 RBM33Q96EV2 1170 aaKnown RBP12□□□□□ -0.49
CCDC149-206ENST00000508236 ZNF330Q9Y3S2 320 aaPredicted RBP12□□□□□ -0.49
CCDC149-206ENST00000508236 TNIKQ9UKE5 1360 aa12□□□□□ -0.49
CCDC149-206ENST00000508236 SOGA1O94964 1423 aa12□□□□□ -0.49
CCDC149-206ENST00000508236 OATP04181 439 aa11.99□□□□□ -0.49
CCDC149-206ENST00000508236 METTL3Q86U44 580 aaKnown RBP11.99□□□□□ -0.49
CCDC149-206ENST00000508236 PPARGC1BQ86YN6 1023 aaKnown RBP11.99□□□□□ -0.49
CCDC149-206ENST00000508236 AEBP1Q8IUX7 1158 aa11.99□□□□□ -0.49
CCDC149-206ENST00000508236 SNRKQ9NRH2 765 aa11.99□□□□□ -0.49
CCDC149-206ENST00000508236 RFC5P40937 340 aa11.98□□□□□ -0.49
CCDC149-206ENST00000508236 TSR1Q2NL82 804 aaKnown RBP11.98□□□□□ -0.49
CCDC149-206ENST00000508236 FAM161AQ3B820 660 aa11.97□□□□□ -0.49
CCDC149-206ENST00000508236 NLRP7Q8WX94 980 aa11.97□□□□□ -0.49
CCDC149-206ENST00000508236 SYNJ1O43426 1573 aa11.96□□□□□ -0.49
CCDC149-206ENST00000508236 ASTLQ6HA08 431 aaPredicted RBP11.96□□□□□ -0.49
CCDC149-206ENST00000508236 SLAIN1Q8ND83 568 aa11.96□□□□□ -0.49
CCDC149-206ENST00000508236 PCDHGA10Q9Y5H3 936 aa11.96□□□□□ -0.49
CCDC149-206ENST00000508236 CLCN6P51797 869 aa11.95□□□□□ -0.5
CCDC149-206ENST00000508236 TMEM259Q4ZIN3 620 aa11.95□□□□□ -0.5
CCDC149-206ENST00000508236 RETREG2Q8NC44 543 aa11.95□□□□□ -0.5
CCDC149-206ENST00000508236 TBC1D2Q9BYX2 928 aa11.95□□□□□ -0.5
CCDC149-206ENST00000508236 HMGXB3Q12766 1538 aa11.95□□□□□ -0.5
CCDC149-206ENST00000508236 GOLGA3Q08378 1498 aa11.95□□□□□ -0.5
CCDC149-206ENST00000508236 CEP162Q5TB80 1403 aa11.94□□□□□ -0.5
CCDC149-206ENST00000508236 KIF21BO75037 1637 aa11.94□□□□□ -0.5
CCDC149-206ENST00000508236 SLC34A2O95436 690 aa11.94□□□□□ -0.5
CCDC149-206ENST00000508236 DIXDC1Q155Q3 683 aa11.94□□□□□ -0.5
CCDC149-206ENST00000508236 TYW1BQ6NUM6 668 aa11.94□□□□□ -0.5
CCDC149-206ENST00000508236 RUSC2Q8N2Y8 1516 aa11.93□□□□□ -0.5
CCDC149-206ENST00000508236 PXYLP1Q8TE99 480 aa11.93□□□□□ -0.5
CCDC149-206ENST00000508236 ADGRG1Q9Y653 693 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms