RNA–Protein interactions for RNA: ENST00000508173.5

PDE6A-202, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best)

Gene PDE6A, Length 5,706 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-202ENST00000508173 CHMP3Q9Y3E7 222 aa10.14□□□□□ -0.79
PDE6A-202ENST00000508173 TCEAL9Q9UHQ7 104 aa10.14□□□□□ -0.79
PDE6A-202ENST00000508173 PRG4Q92954 1404 aaPredicted RBP10.14□□□□□ -0.79
PDE6A-202ENST00000508173 MCCP23508 829 aa10.14□□□□□ -0.79
PDE6A-202ENST00000508173 THEMISQ8N1K5 641 aaPredicted RBP10.14□□□□□ -0.79
PDE6A-202ENST00000508173 NGDNQ8NEJ9 315 aaKnown RBP10.14□□□□□ -0.79
PDE6A-202ENST00000508173 PRKCSHP14314 528 aaPredicted RBP10.12□□□□□ -0.79
PDE6A-202ENST00000508173 UBAP1LF5GYI3 381 aa10.12□□□□□ -0.79
PDE6A-202ENST00000508173 MARCH6O60337 910 aa10.12□□□□□ -0.79
PDE6A-202ENST00000508173 NOL10Q9BSC4 688 aaKnown RBP10.12□□□□□ -0.79
PDE6A-202ENST00000508173 SYNJ1O43426 1573 aa10.12□□□□□ -0.79
PDE6A-202ENST00000508173 CCER2I3L3R5 266 aa10.11□□□□□ -0.79
PDE6A-202ENST00000508173 ANKLE2Q86XL3 938 aa10.11□□□□□ -0.79
PDE6A-202ENST00000508173 PLCB2Q00722 1185 aa10.11□□□□□ -0.79
PDE6A-202ENST00000508173 CC2D1BQ5T0F9 858 aaKnown RBP10.11□□□□□ -0.79
PDE6A-202ENST00000508173 SLC4A3P48751 1232 aa10.11□□□□□ -0.79
PDE6A-202ENST00000508173 CALD1Q05682 793 aaKnown RBP10.11□□□□□ -0.79
PDE6A-202ENST00000508173 PROSER2Q86WR7 435 aaPredicted RBP10.1□□□□□ -0.79
PDE6A-202ENST00000508173 VSIG10Q8N0Z9 540 aa10.1□□□□□ -0.79
PDE6A-202ENST00000508173 TMF1P82094 1093 aa10.1□□□□□ -0.79
PDE6A-202ENST00000508173 SLKQ9H2G2 1235 aaPredicted RBP10.1□□□□□ -0.79
PDE6A-202ENST00000508173 AMOTL1Q8IY63 956 aa10.1□□□□□ -0.79
PDE6A-202ENST00000508173 CCDC34Q96HJ3 373 aa10.1□□□□□ -0.79
PDE6A-202ENST00000508173 CFAP44Q96MT7 982 aa10.1□□□□□ -0.79
PDE6A-202ENST00000508173 MORC1Q86VD1 984 aa10.09□□□□□ -0.79
PDE6A-202ENST00000508173 FRAT1Q92837 279 aaPredicted RBP10.09□□□□□ -0.79
PDE6A-202ENST00000508173 CEP89Q96ST8 783 aa10.09□□□□□ -0.79
PDE6A-202ENST00000508173 HSP90AB1P08238 724 aaKnown RBP10.09□□□□□ -0.79
PDE6A-202ENST00000508173 ANKRD30AQ9BXX3 1397 aa10.09□□□□□ -0.79
PDE6A-202ENST00000508173 ARHGAP35Q9NRY4 1499 aa10.09□□□□□ -0.79
PDE6A-202ENST00000508173 NUTM2BA6NNL0 878 aaPredicted RBP10.08□□□□□ -0.8
PDE6A-202ENST00000508173 NUTM2EB1AL46 878 aaPredicted RBP10.08□□□□□ -0.8
PDE6A-202ENST00000508173 NUTM2DQ5VT03 806 aaPredicted RBP10.08□□□□□ -0.8
PDE6A-202ENST00000508173 KIAA1211Q6ZU35 1233 aa10.08□□□□□ -0.8
PDE6A-202ENST00000508173 NUTM2AQ8IVF1 878 aaPredicted RBP10.08□□□□□ -0.8
PDE6A-202ENST00000508173 NOC3LQ8WTT2 800 aaKnown RBP10.08□□□□□ -0.8
PDE6A-202ENST00000508173 MSNP26038 577 aaKnown RBP10.08□□□□□ -0.8
PDE6A-202ENST00000508173 RASSF8Q8NHQ8 419 aa10.08□□□□□ -0.8
PDE6A-202ENST00000508173 GPATCH3Q96I76 525 aa10.08□□□□□ -0.8
PDE6A-202ENST00000508173 HSPA5P11021 654 aaKnown RBP10.07□□□□□ -0.8
PDE6A-202ENST00000508173 MAGI1Q96QZ7 1491 aaPredicted RBP10.07□□□□□ -0.8
PDE6A-202ENST00000508173 STK31Q9BXU1 1019 aa10.06□□□□□ -0.8
PDE6A-202ENST00000508173 FHOD3Q2V2M9 1422 aa10.06□□□□□ -0.8
PDE6A-202ENST00000508173 SYNJ2O15056 1496 aa10.06□□□□□ -0.8
PDE6A-202ENST00000508173 POLA1P09884 1462 aaPredicted RBP10.06□□□□□ -0.8
PDE6A-202ENST00000508173 AMPHP49418 695 aa10.06□□□□□ -0.8
PDE6A-202ENST00000508173 FBXW7Q969H0 707 aa10.06□□□□□ -0.8
PDE6A-202ENST00000508173 PRDM2Q13029 1718 aa10.06□□□□□ -0.8
PDE6A-202ENST00000508173 CCAR1Q8IX12 1150 aaKnown RBP10.05□□□□□ -0.8
PDE6A-202ENST00000508173 TOMM22Q9NS69 142 aa10.04□□□□□ -0.8
PDE6A-202ENST00000508173 HSP90AA2PQ14568 343 aaPredicted RBP10.04□□□□□ -0.8
PDE6A-202ENST00000508173 IL27Q8NEV9 243 aa10.04□□□□□ -0.8
PDE6A-202ENST00000508173 HTATSF1O43719 755 aaKnown RBP10.03□□□□□ -0.8
PDE6A-202ENST00000508173 PSME1Q06323 249 aa10.03□□□□□ -0.8
PDE6A-202ENST00000508173 SYTL4Q96C24 671 aaPredicted RBP10.03□□□□□ -0.8
PDE6A-202ENST00000508173 RAD21O60216 631 aa10.02□□□□□ -0.8
PDE6A-202ENST00000508173 TEX14Q8IWB6 1497 aa10.02□□□□□ -0.81
PDE6A-202ENST00000508173 FANCIQ9NVI1 1328 aa10.02□□□□□ -0.81
PDE6A-202ENST00000508173 IGF1RP08069 1367 aa10.02□□□□□ -0.81
PDE6A-202ENST00000508173 HNRNPMP52272 730 aaKnown RBP eCLIP10.02□□□□□ -0.81
PDE6A-202ENST00000508173 C1orf141Q5JVX7 400 aa10.02□□□□□ -0.81
PDE6A-202ENST00000508173 HSCBQ8IWL3 235 aa10.02□□□□□ -0.81
PDE6A-202ENST00000508173 RSPH6AQ9H0K4 717 aa10.01□□□□□ -0.81
PDE6A-202ENST00000508173 GOLGA6L3A6NEY3 463 aa10.01□□□□□ -0.81
PDE6A-202ENST00000508173 PDE4CQ08493 712 aa10.01□□□□□ -0.81
PDE6A-202ENST00000508173 KANK4Q5T7N3 995 aaPredicted RBP10.01□□□□□ -0.81
PDE6A-202ENST00000508173 TERF2IPQ9NYB0 399 aa10.01□□□□□ -0.81
PDE6A-202ENST00000508173 IPO8O15397 1037 aaKnown RBP10□□□□□ -0.81
PDE6A-202ENST00000508173 GSE1Q14687 1217 aa10□□□□□ -0.81
PDE6A-202ENST00000508173 LTV1Q96GA3 475 aaPredicted RBP10□□□□□ -0.81
PDE6A-202ENST00000508173 RBM33Q96EV2 1170 aaKnown RBP10□□□□□ -0.81
PDE6A-202ENST00000508173 TCERG1O14776 1098 aaKnown RBP10□□□□□ -0.81
PDE6A-202ENST00000508173 TTC5Q8N0Z6 440 aa10□□□□□ -0.81
PDE6A-202ENST00000508173 DCAF11Q8TEB1 546 aa10□□□□□ -0.81
PDE6A-202ENST00000508173 PEG3Q9GZU2 1588 aa9.99□□□□□ -0.81
PDE6A-202ENST00000508173 UACAQ9BZF9 1416 aa9.99□□□□□ -0.81
PDE6A-202ENST00000508173 FOXD4L1Q9NU39 408 aa9.99□□□□□ -0.81
PDE6A-202ENST00000508173 PPP6R1Q9UPN7 881 aa9.99□□□□□ -0.81
PDE6A-202ENST00000508173 RCAN3Q9UKA8 241 aa9.99□□□□□ -0.81
PDE6A-202ENST00000508173 VPS37DQ86XT2 251 aa9.98□□□□□ -0.81
PDE6A-202ENST00000508173 EIF3AQ14152 1382 aaKnown RBP9.98□□□□□ -0.81
PDE6A-202ENST00000508173 CCDC43Q96MW1 224 aaKnown RBP9.98□□□□□ -0.81
PDE6A-202ENST00000508173 HSP90B1P14625 803 aaKnown RBP9.97□□□□□ -0.81
PDE6A-202ENST00000508173 TPM4P67936 248 aa9.97□□□□□ -0.81
PDE6A-202ENST00000508173 A0A0U1RQG5 324 aaPredicted RBP9.97□□□□□ -0.81
PDE6A-202ENST00000508173 TXNDC2Q86VQ3 553 aa9.97□□□□□ -0.81
PDE6A-202ENST00000508173 VGFO15240 615 aaPredicted RBP9.96□□□□□ -0.81
PDE6A-202ENST00000508173 WWC2Q6AWC2 1192 aa9.96□□□□□ -0.81
PDE6A-202ENST00000508173 NGLY1Q96IV0 654 aa9.96□□□□□ -0.81
PDE6A-202ENST00000508173 DRC7Q8IY82 874 aa9.96□□□□□ -0.82
PDE6A-202ENST00000508173 R3HCC1Q9Y3T6 440 aaKnown RBP9.96□□□□□ -0.82
PDE6A-202ENST00000508173 RAB3GAP2Q9H2M9 1393 aa9.96□□□□□ -0.82
PDE6A-202ENST00000508173 LMOD3Q0VAK6 560 aa9.96□□□□□ -0.82
PDE6A-202ENST00000508173 SETD5Q9C0A6 1442 aa9.96□□□□□ -0.82
PDE6A-202ENST00000508173 WDHD1O75717 1129 aaPredicted RBP9.95□□□□□ -0.82
PDE6A-202ENST00000508173 VPS8Q8N3P4 1428 aa9.95□□□□□ -0.82
PDE6A-202ENST00000508173 PDE4AP27815 886 aa9.95□□□□□ -0.82
PDE6A-202ENST00000508173 WWC1Q8IX03 1113 aa9.95□□□□□ -0.82
PDE6A-202ENST00000508173 BRPF3Q9ULD4 1205 aa9.95□□□□□ -0.82
PDE6A-202ENST00000508173 CUX1P39880 1505 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms