RNA–Protein interactions for RNA: ENST00000508164.5

TSPAN17-207, Transcript of tetraspanin 17, humanhuman

TSL 1 (best) BASIC

Gene TSPAN17, Length 2,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-207ENST00000508164 RGL3Q3MIN7 710 aa29■■■□□ 2.23
TSPAN17-207ENST00000508164 CCDC136Q96JN2 1154 aa28.98■■■□□ 2.23
TSPAN17-207ENST00000508164 ARHGEF5Q12774 1597 aa28.97■■■□□ 2.23
TSPAN17-207ENST00000508164 SAMD9LQ8IVG5 1584 aa28.97■■■□□ 2.23
TSPAN17-207ENST00000508164 FAM135AQ9P2D6 1515 aa28.96■■■□□ 2.23
TSPAN17-207ENST00000508164 MYBBP1AQ9BQG0 1328 aaKnown RBP28.96■■■□□ 2.23
TSPAN17-207ENST00000508164 NBPF1Q3BBV0 1214 aa28.95■■■□□ 2.23
TSPAN17-207ENST00000508164 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.95■■■□□ 2.23
TSPAN17-207ENST00000508164 SALL2Q9Y467 1007 aaPredicted RBP28.95■■■□□ 2.22
TSPAN17-207ENST00000508164 CDC42BPBQ9Y5S2 1711 aa28.94■■■□□ 2.22
TSPAN17-207ENST00000508164 CCDC141Q6ZP82 1450 aa28.94■■■□□ 2.22
TSPAN17-207ENST00000508164 LRPPRCP42704 1394 aaKnown RBP28.94■■■□□ 2.22
TSPAN17-207ENST00000508164 RALBP1Q15311 655 aa28.92■■■□□ 2.22
TSPAN17-207ENST00000508164 BRD4O60885 1362 aaPredicted RBP28.92■■■□□ 2.22
TSPAN17-207ENST00000508164 CCDC144AA2RUR9 1427 aa28.9■■■□□ 2.22
TSPAN17-207ENST00000508164 E9PCH4 1651 aa28.89■■■□□ 2.22
TSPAN17-207ENST00000508164 PRAG1Q86YV5 1406 aa28.89■■■□□ 2.21
TSPAN17-207ENST00000508164 PREX2Q70Z35 1606 aa28.86■■■□□ 2.21
TSPAN17-207ENST00000508164 SYCP2Q9BX26 1530 aa28.86■■■□□ 2.21
TSPAN17-207ENST00000508164 TRPM1Q7Z4N2 1603 aa28.85■■■□□ 2.21
TSPAN17-207ENST00000508164 PLA2R1Q13018 1463 aa28.84■■■□□ 2.21
TSPAN17-207ENST00000508164 KTN1Q86UP2 1357 aaKnown RBP28.82■■■□□ 2.2
TSPAN17-207ENST00000508164 RSPH4AQ5TD94 716 aa28.81■■■□□ 2.2
TSPAN17-207ENST00000508164 NLRP13Q86W25 1043 aa28.8■■■□□ 2.2
TSPAN17-207ENST00000508164 PER1O15534 1290 aaPredicted RBP28.8■■■□□ 2.2
TSPAN17-207ENST00000508164 ARHGAP5Q13017 1502 aa28.8■■■□□ 2.2
TSPAN17-207ENST00000508164 A2MP01023 1474 aa28.79■■■□□ 2.2
TSPAN17-207ENST00000508164 CC2D1BQ5T0F9 858 aaKnown RBP28.79■■■□□ 2.2
TSPAN17-207ENST00000508164 PARD3Q8TEW0 1356 aa28.79■■■□□ 2.2
TSPAN17-207ENST00000508164 TTC37Q6PGP7 1564 aa28.79■■■□□ 2.2
TSPAN17-207ENST00000508164 DISP3Q9P2K9 1392 aa28.77■■■□□ 2.2
TSPAN17-207ENST00000508164 RRP1P56182 461 aaKnown RBP28.77■■■□□ 2.2
TSPAN17-207ENST00000508164 PLEKHH2Q8IVE3 1493 aa28.76■■■□□ 2.19
TSPAN17-207ENST00000508164 EXOC6Q8TAG9 804 aa28.76■■■□□ 2.19
TSPAN17-207ENST00000508164 PAK3O75914 559 aaPredicted RBP28.75■■■□□ 2.19
TSPAN17-207ENST00000508164 TESK2Q96S53 571 aa28.75■■■□□ 2.19
TSPAN17-207ENST00000508164 RCAN3Q9UKA8 241 aa28.74■■■□□ 2.19
TSPAN17-207ENST00000508164 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.73■■■□□ 2.192e-6■■■■■ 51.7
TSPAN17-207ENST00000508164 CDCA7LQ96GN5 454 aa28.73■■■□□ 2.19
TSPAN17-207ENST00000508164 UNC13BO14795 1591 aa28.72■■■□□ 2.19
TSPAN17-207ENST00000508164 NOP58Q9Y2X3 529 aaKnown RBP28.72■■■□□ 2.19
TSPAN17-207ENST00000508164 GPRASP1Q5JY77 1395 aa28.71■■■□□ 2.19
TSPAN17-207ENST00000508164 PANK3Q9H999 370 aa28.71■■■□□ 2.19
TSPAN17-207ENST00000508164 COL17A1Q9UMD9 1497 aaPredicted RBP28.69■■■□□ 2.18
TSPAN17-207ENST00000508164 MYO5CQ9NQX4 1742 aa28.67■■■□□ 2.18
TSPAN17-207ENST00000508164 MAST1Q9Y2H9 1570 aa28.67■■■□□ 2.18
TSPAN17-207ENST00000508164 PRDM15P57071 1507 aaPredicted RBP28.66■■■□□ 2.18
TSPAN17-207ENST00000508164 ERBINQ96RT1 1412 aa28.65■■■□□ 2.18
TSPAN17-207ENST00000508164 CHD1O14646 1710 aa28.63■■■□□ 2.17
TSPAN17-207ENST00000508164 IQGAP3Q86VI3 1631 aa28.63■■■□□ 2.17
TSPAN17-207ENST00000508164 ERCC6L2Q5T890 1561 aa28.63■■■□□ 2.17
TSPAN17-207ENST00000508164 NBR1Q14596 966 aa28.61■■■□□ 2.17
TSPAN17-207ENST00000508164 ANP32AP39687 249 aaKnown RBP28.61■■■□□ 2.17
TSPAN17-207ENST00000508164 PDE3BQ13370 1112 aa28.61■■■□□ 2.17
TSPAN17-207ENST00000508164 PLIN1O60240 522 aa28.6■■■□□ 2.17
TSPAN17-207ENST00000508164 TMF1P82094 1093 aa28.6■■■□□ 2.17
TSPAN17-207ENST00000508164 PLXNC1O60486 1568 aa28.59■■■□□ 2.17
TSPAN17-207ENST00000508164 IPO9Q96P70 1041 aaKnown RBP28.58■■■□□ 2.17
TSPAN17-207ENST00000508164 LAMC1P11047 1609 aa28.57■■■□□ 2.16
TSPAN17-207ENST00000508164 DUOX2Q9NRD8 1548 aa28.56■■■□□ 2.16
TSPAN17-207ENST00000508164 WASHC2CQ9Y4E1 1318 aa28.56■■■□□ 2.16
TSPAN17-207ENST00000508164 EIF2AK4Q9P2K8 1649 aaKnown RBP28.54■■■□□ 2.16
TSPAN17-207ENST00000508164 ABCC2Q92887 1545 aa28.53■■■□□ 2.16
TSPAN17-207ENST00000508164 BLMP54132 1417 aaPredicted RBP28.52■■■□□ 2.16
TSPAN17-207ENST00000508164 ATP10AO60312 1499 aa28.51■■■□□ 2.15
TSPAN17-207ENST00000508164 NPM2Q86SE8 214 aaKnown RBP28.51■■■□□ 2.15
TSPAN17-207ENST00000508164 MAGI2Q86UL8 1455 aa28.5■■■□□ 2.15
TSPAN17-207ENST00000508164 SHROOM2Q13796 1616 aa28.5■■■□□ 2.15
TSPAN17-207ENST00000508164 ADAMTS8Q9UP79 889 aa28.49■■■□□ 2.15
TSPAN17-207ENST00000508164 TRAPPC8Q9Y2L5 1435 aa28.49■■■□□ 2.15
TSPAN17-207ENST00000508164 ZBTB47Q9UFB7 747 aaPredicted RBP28.48■■■□□ 2.15
TSPAN17-207ENST00000508164 EFCAB2Q5VUJ9 269 aa28.47■■■□□ 2.15
TSPAN17-207ENST00000508164 SKAP1Q86WV1 359 aa28.47■■■□□ 2.15
TSPAN17-207ENST00000508164 DEKP35659 375 aaKnown RBP28.47■■■□□ 2.15
TSPAN17-207ENST00000508164 PLCH2O75038 1416 aa28.47■■■□□ 2.15
TSPAN17-207ENST00000508164 CRBNQ96SW2 442 aa28.45■■■□□ 2.15
TSPAN17-207ENST00000508164 TCERG1O14776 1098 aaKnown RBP28.45■■■□□ 2.14
TSPAN17-207ENST00000508164 RNF17Q9BXT8 1623 aaKnown RBP28.44■■■□□ 2.14
TSPAN17-207ENST00000508164 WDR7Q9Y4E6 1490 aa28.43■■■□□ 2.14
TSPAN17-207ENST00000508164 PDE4AP27815 886 aa28.43■■■□□ 2.14
TSPAN17-207ENST00000508164 AFAP1Q8N556 730 aa28.43■■■□□ 2.14
TSPAN17-207ENST00000508164 KNSTRNQ9Y448 316 aa28.42■■■□□ 2.14
TSPAN17-207ENST00000508164 PPP2R1AP30153 589 aa28.41■■■□□ 2.14
TSPAN17-207ENST00000508164 C20orf194Q5TEA3 1177 aa28.41■■■□□ 2.14
TSPAN17-207ENST00000508164 MYT1LQ9UL68 1186 aa28.4■■■□□ 2.14
TSPAN17-207ENST00000508164 ZMYM4Q5VZL5 1548 aa28.39■■■□□ 2.14
TSPAN17-207ENST00000508164 ABCC1P33527 1531 aa28.38■■■□□ 2.13
TSPAN17-207ENST00000508164 MADDQ8WXG6 1647 aa28.38■■■□□ 2.13
TSPAN17-207ENST00000508164 INSRP06213 1382 aa28.38■■■□□ 2.13
TSPAN17-207ENST00000508164 ZCCHC11Q5TAX3 1644 aaKnown RBP28.38■■■□□ 2.13
TSPAN17-207ENST00000508164 SPAG9O60271 1321 aaKnown RBP28.37■■■□□ 2.13
TSPAN17-207ENST00000508164 AMER1Q5JTC6 1135 aaPredicted RBP28.37■■■□□ 2.13
TSPAN17-207ENST00000508164 BACH2Q9BYV9 841 aa28.36■■■□□ 2.13
TSPAN17-207ENST00000508164 PLEKHH1Q9ULM0 1364 aa28.36■■■□□ 2.13
TSPAN17-207ENST00000508164 WDR43Q15061 677 aaKnown RBP eCLIP28.35■■■□□ 2.13
TSPAN17-207ENST00000508164 IQGAP1P46940 1657 aa28.33■■■□□ 2.13
TSPAN17-207ENST00000508164 MS4A1P11836 297 aa28.29■■■□□ 2.12
TSPAN17-207ENST00000508164 DUSP27Q5VZP5 1158 aa28.29■■■□□ 2.12
TSPAN17-207ENST00000508164 CLTCL1P53675 1640 aa28.29■■■□□ 2.12
TSPAN17-207ENST00000508164 SCAF11Q99590 1463 aaKnown RBP28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms