RNA–Protein interactions for RNA: ENST00000508132.1

CDH6-204, Transcript of cadherin 6, humanhuman

TSL 2

Gene CDH6, Length 678 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6-204ENST00000508132 LSM11P83369 360 aaKnown RBP eCLIP13.62□□□□□ -0.23
CDH6-204ENST00000508132 CHMP7Q8WUX9 453 aaPredicted RBP13.62□□□□□ -0.23
CDH6-204ENST00000508132 MAGI1Q96QZ7 1491 aaPredicted RBP13.6□□□□□ -0.23
CDH6-204ENST00000508132 SYNJ2O15056 1496 aa13.58□□□□□ -0.24
CDH6-204ENST00000508132 CHGAP10645 457 aaKnown RBP13.57□□□□□ -0.24
CDH6-204ENST00000508132 NKX1-1Q15270 411 aaPredicted RBP13.57□□□□□ -0.24
CDH6-204ENST00000508132 KDM6BO15054 1643 aa13.57□□□□□ -0.24
CDH6-204ENST00000508132 CCDC88BA6NC98 1476 aa13.55□□□□□ -0.24
CDH6-204ENST00000508132 SUPT5HO00267 1087 aaKnown RBP13.55□□□□□ -0.24
CDH6-204ENST00000508132 SOGA1O94964 1423 aa13.54□□□□□ -0.24
CDH6-204ENST00000508132 PBRM1Q86U86 1689 aa13.53□□□□□ -0.24
CDH6-204ENST00000508132 DSG2Q14126 1118 aa13.53□□□□□ -0.24
CDH6-204ENST00000508132 PLPP6Q8IY26 295 aa13.53□□□□□ -0.24
CDH6-204ENST00000508132 CEP170Q5SW79 1584 aa13.53□□□□□ -0.24
CDH6-204ENST00000508132 GRIN2BQ13224 1484 aa13.52□□□□□ -0.25
CDH6-204ENST00000508132 WDR97A6NE52 1622 aa13.52□□□□□ -0.25
CDH6-204ENST00000508132 TSPOAP1O95153 1857 aa13.51□□□□□ -0.25
CDH6-204ENST00000508132 DIP2BQ9P265 1576 aa13.51□□□□□ -0.25
CDH6-204ENST00000508132 ADGRL1O94910 1474 aa13.51□□□□□ -0.25
CDH6-204ENST00000508132 FOXK1P85037 733 aa13.51□□□□□ -0.25
CDH6-204ENST00000508132 PTGER2P43116 358 aa13.5□□□□□ -0.25
CDH6-204ENST00000508132 FBXO41Q8TF61 875 aa13.5□□□□□ -0.25
CDH6-204ENST00000508132 PTCD2Q8WV60 388 aaKnown RBP13.5□□□□□ -0.25
CDH6-204ENST00000508132 GPHNQ9NQX3 736 aaPredicted RBP13.5□□□□□ -0.25
CDH6-204ENST00000508132 ABCC10Q5T3U5 1492 aa13.49□□□□□ -0.25
CDH6-204ENST00000508132 PBX2P40425 430 aa13.49□□□□□ -0.25
CDH6-204ENST00000508132 FAM69CQ0P6D2 419 aa13.48□□□□□ -0.25
CDH6-204ENST00000508132 FGD5Q6ZNL6 1462 aa13.48□□□□□ -0.25
CDH6-204ENST00000508132 SHROOM2Q13796 1616 aa13.47□□□□□ -0.25
CDH6-204ENST00000508132 LMTK3Q96Q04 1460 aa13.44□□□□□ -0.26
CDH6-204ENST00000508132 PSEN2P49810 448 aa13.44□□□□□ -0.26
CDH6-204ENST00000508132 DMRTA1Q5VZB9 504 aa13.44□□□□□ -0.26
CDH6-204ENST00000508132 ARHGAP33O14559 1287 aa13.41□□□□□ -0.26
CDH6-204ENST00000508132 ADGRD1Q6QNK2 874 aa13.41□□□□□ -0.26
CDH6-204ENST00000508132 ILDR2Q71H61 639 aa13.4□□□□□ -0.26
CDH6-204ENST00000508132 MAPKBP1O60336 1514 aa13.39□□□□□ -0.27
CDH6-204ENST00000508132 UPF1Q92900 1129 aaKnown RBP eCLIP13.39□□□□□ -0.27
CDH6-204ENST00000508132 GRIN2AQ12879 1464 aa13.38□□□□□ -0.27
CDH6-204ENST00000508132 ABCA5Q8WWZ7 1642 aa13.38□□□□□ -0.27
CDH6-204ENST00000508132 CUX1P39880 1505 aa13.38□□□□□ -0.27
CDH6-204ENST00000508132 NUP160Q12769 1436 aa13.37□□□□□ -0.27
CDH6-204ENST00000508132 CRISPLD2Q9H0B8 497 aa13.36□□□□□ -0.27
CDH6-204ENST00000508132 ADCY10Q96PN6 1610 aa13.35□□□□□ -0.27
CDH6-204ENST00000508132 PPRC1Q5VV67 1664 aaKnown RBP13.35□□□□□ -0.27
CDH6-204ENST00000508132 PSDA5PKW4 1024 aaPredicted RBP13.35□□□□□ -0.27
CDH6-204ENST00000508132 NCKAP5LQ9HCH0 1330 aa13.35□□□□□ -0.27
CDH6-204ENST00000508132 OXER1Q8TDS5 423 aa13.34□□□□□ -0.27
CDH6-204ENST00000508132 PPP4R3BQ5MIZ7 849 aa13.33□□□□□ -0.28
CDH6-204ENST00000508132 SOCS7O14512 581 aa13.32□□□□□ -0.28
CDH6-204ENST00000508132 HRO43593 1189 aa13.32□□□□□ -0.28
CDH6-204ENST00000508132 ADAMTS12P58397 1594 aa13.32□□□□□ -0.28
CDH6-204ENST00000508132 PPP1R15BQ5SWA1 713 aa13.31□□□□□ -0.28
CDH6-204ENST00000508132 KCNK17Q96T54 332 aa13.31□□□□□ -0.28
CDH6-204ENST00000508132 PRG4Q92954 1404 aaPredicted RBP13.3□□□□□ -0.28
CDH6-204ENST00000508132 TBC1D12O60347 775 aa13.29□□□□□ -0.28
CDH6-204ENST00000508132 COL17A1Q9UMD9 1497 aaPredicted RBP13.29□□□□□ -0.28
CDH6-204ENST00000508132 GTPBP6O43824 516 aaPredicted RBP13.28□□□□□ -0.28
CDH6-204ENST00000508132 TK2O00142 265 aa13.27□□□□□ -0.29
CDH6-204ENST00000508132 ZNF454Q8N9F8 522 aa13.25□□□□□ -0.29
CDH6-204ENST00000508132 ABCA10Q8WWZ4 1543 aa13.23□□□□□ -0.29
CDH6-204ENST00000508132 KCTD12Q96CX2 325 aaKnown RBP13.22□□□□□ -0.29
CDH6-204ENST00000508132 PLA2G2EQ9NZK7 142 aa13.22□□□□□ -0.29
CDH6-204ENST00000508132 HCSTQ9UBK5 93 aa13.22□□□□□ -0.29
CDH6-204ENST00000508132 RYDENQ9NUL5 291 aaKnown RBP13.21□□□□□ -0.29
CDH6-204ENST00000508132 VPS9D1Q9Y2B5 631 aa13.2□□□□□ -0.3
CDH6-204ENST00000508132 FOSBP53539 338 aa13.19□□□□□ -0.3
CDH6-204ENST00000508132 LARP6Q9BRS8 491 aaKnown RBP13.19□□□□□ -0.3
CDH6-204ENST00000508132 DISP3Q9P2K9 1392 aa13.19□□□□□ -0.3
CDH6-204ENST00000508132 PDE4AP27815 886 aa13.18□□□□□ -0.3
CDH6-204ENST00000508132 RUSC2Q8N2Y8 1516 aa13.17□□□□□ -0.3
CDH6-204ENST00000508132 CADPS2Q86UW7 1296 aa13.16□□□□□ -0.3
CDH6-204ENST00000508132 JPH4Q96JJ6 628 aa13.16□□□□□ -0.3
CDH6-204ENST00000508132 BCL2L12Q9HB09 334 aa13.16□□□□□ -0.3
CDH6-204ENST00000508132 EVI5O60447 810 aa13.15□□□□□ -0.3
CDH6-204ENST00000508132 FHAD1B1AJZ9 1412 aa13.14□□□□□ -0.31
CDH6-204ENST00000508132 DDX27Q96GQ7 796 aaKnown RBP13.14□□□□□ -0.31
CDH6-204ENST00000508132 EMILIN3Q9NT22 766 aa13.14□□□□□ -0.31
CDH6-204ENST00000508132 ADAM33Q9BZ11 813 aa13.13□□□□□ -0.31
CDH6-204ENST00000508132 ANO8Q9HCE9 1232 aaPredicted RBP13.13□□□□□ -0.31
CDH6-204ENST00000508132 TOP2BQ02880 1626 aa13.13□□□□□ -0.31
CDH6-204ENST00000508132 GLI2P10070 1586 aa13.12□□□□□ -0.31
CDH6-204ENST00000508132 MFSD10Q14728 455 aa13.11□□□□□ -0.31
CDH6-204ENST00000508132 KCNH8Q96L42 1107 aa13.11□□□□□ -0.31
CDH6-204ENST00000508132 STAC3Q96MF2 364 aa13.09□□□□□ -0.31
CDH6-204ENST00000508132 ZBED2Q9BTP6 218 aa13.09□□□□□ -0.31
CDH6-204ENST00000508132 KIF21BO75037 1637 aa13.09□□□□□ -0.31
CDH6-204ENST00000508132 MAP3K4Q9Y6R4 1608 aa13.09□□□□□ -0.31
CDH6-204ENST00000508132 PTPREP23469 700 aa13.08□□□□□ -0.32
CDH6-204ENST00000508132 PTPN5P54829 565 aa13.08□□□□□ -0.32
CDH6-204ENST00000508132 SPATA31D1Q6ZQQ2 1576 aa13.07□□□□□ -0.32
CDH6-204ENST00000508132 BHMG1C9JSJ3 638 aaPredicted RBP13.07□□□□□ -0.32
CDH6-204ENST00000508132 CUL7Q14999 1698 aa13.07□□□□□ -0.32
CDH6-204ENST00000508132 ASXL2Q76L83 1435 aa13.06□□□□□ -0.32
CDH6-204ENST00000508132 ZDHHC16Q969W1 377 aa13.06□□□□□ -0.32
CDH6-204ENST00000508132 SLC4A5Q9BY07 1137 aa13.05□□□□□ -0.32
CDH6-204ENST00000508132 MAP3K9P80192 1104 aa13.04□□□□□ -0.32
CDH6-204ENST00000508132 ERICH3Q5RHP9 1530 aa13.03□□□□□ -0.32
CDH6-204ENST00000508132 ABCC2Q92887 1545 aa13.03□□□□□ -0.32
CDH6-204ENST00000508132 PCDHGA10Q9Y5H3 936 aa13.02□□□□□ -0.33
CDH6-204ENST00000508132 PCF11O94913 1555 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms