RNA–Protein interactions for RNA: ENST00000506747.5

CLOCK-205, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 1,337 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-205ENST00000506747 ZDHHC16Q969W1 377 aa9.95□□□□□ -0.82
CLOCK-205ENST00000506747 LARP6Q9BRS8 491 aaKnown RBP9.94□□□□□ -0.82
CLOCK-205ENST00000506747 DDX27Q96GQ7 796 aaKnown RBP9.93□□□□□ -0.82
CLOCK-205ENST00000506747 ADAM33Q9BZ11 813 aa9.93□□□□□ -0.82
CLOCK-205ENST00000506747 ITGBL1O95965 494 aaPredicted RBP9.92□□□□□ -0.82
CLOCK-205ENST00000506747 EVI5O60447 810 aa9.91□□□□□ -0.82
CLOCK-205ENST00000506747 CADPS2Q86UW7 1296 aa9.9□□□□□ -0.82
CLOCK-205ENST00000506747 LCE2BO14633 110 aa9.89□□□□□ -0.83
CLOCK-205ENST00000506747 ANKK1Q8NFD2 765 aa9.89□□□□□ -0.83
CLOCK-205ENST00000506747 RABGEF1Q9UJ41 708 aa9.89□□□□□ -0.83
CLOCK-205ENST00000506747 MFSD10Q14728 455 aa9.88□□□□□ -0.83
CLOCK-205ENST00000506747 PPP1R3GB7ZBB8 358 aa9.87□□□□□ -0.83
CLOCK-205ENST00000506747 NYAP1Q6ZVC0 841 aa9.85□□□□□ -0.83
CLOCK-205ENST00000506747 TRAF7Q6Q0C0 670 aa9.84□□□□□ -0.83
CLOCK-205ENST00000506747 LAPTM4BQ86VI4 370 aa9.83□□□□□ -0.84
CLOCK-205ENST00000506747 SOWAHBA6NEL2 793 aa9.82□□□□□ -0.84
CLOCK-205ENST00000506747 MAP3K9P80192 1104 aa9.82□□□□□ -0.84
CLOCK-205ENST00000506747 PROX2Q3B8N5 592 aa9.82□□□□□ -0.84
CLOCK-205ENST00000506747 BCAMP50895 628 aa9.82□□□□□ -0.84
CLOCK-205ENST00000506747 PCDHGA10Q9Y5H3 936 aa9.82□□□□□ -0.84
CLOCK-205ENST00000506747 COL9A1P20849 921 aa9.8□□□□□ -0.84
CLOCK-205ENST00000506747 KCNC4Q03721 635 aa9.8□□□□□ -0.84
CLOCK-205ENST00000506747 LAPTM4AQ15012 233 aa9.79□□□□□ -0.84
CLOCK-205ENST00000506747 FBXW7Q969H0 707 aa9.79□□□□□ -0.84
CLOCK-205ENST00000506747 BCANQ96GW7 911 aa9.79□□□□□ -0.84
CLOCK-205ENST00000506747 ZFRQ96KR1 1074 aaKnown RBP9.79□□□□□ -0.84
CLOCK-205ENST00000506747 ONECUT3O60422 494 aaPredicted RBP9.78□□□□□ -0.84
CLOCK-205ENST00000506747 TYW1BQ6NUM6 668 aa9.77□□□□□ -0.85
CLOCK-205ENST00000506747 EMILIN3Q9NT22 766 aa9.77□□□□□ -0.85
CLOCK-205ENST00000506747 WBP1LQ9NX94 342 aa9.77□□□□□ -0.85
CLOCK-205ENST00000506747 KIAA1468Q9P260 1216 aa9.77□□□□□ -0.85
CLOCK-205ENST00000506747 PHF14O94880 888 aa9.76□□□□□ -0.85
CLOCK-205ENST00000506747 WDR70Q9NW82 654 aa9.75□□□□□ -0.85
CLOCK-205ENST00000506747 CAMK2BQ13554 666 aa9.74□□□□□ -0.85
CLOCK-205ENST00000506747 GFRA3O60609 400 aa9.71□□□□□ -0.86
CLOCK-205ENST00000506747 ZNF775Q96BV0 537 aaPredicted RBP9.71□□□□□ -0.86
CLOCK-205ENST00000506747 TSR3Q9UJK0 312 aaKnown RBP9.71□□□□□ -0.86
CLOCK-205ENST00000506747 DPYSL4O14531 572 aa9.7□□□□□ -0.86
CLOCK-205ENST00000506747 FAM98CQ17RN3 349 aaKnown RBP9.7□□□□□ -0.86
CLOCK-205ENST00000506747 ZNF787Q6DD87 383 aa9.7□□□□□ -0.86
CLOCK-205ENST00000506747 SEPT9Q9UHD8 586 aaPredicted RBP9.7□□□□□ -0.86
CLOCK-205ENST00000506747 C6orf132Q5T0Z8 1188 aa9.69□□□□□ -0.86
CLOCK-205ENST00000506747 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.69□□□□□ -0.86
CLOCK-205ENST00000506747 TRIM6-TRIM34B2RNG4 842 aa9.68□□□□□ -0.86
CLOCK-205ENST00000506747 E2F4Q16254 413 aa9.68□□□□□ -0.86
CLOCK-205ENST00000506747 EPAS1Q99814 870 aa9.68□□□□□ -0.86
CLOCK-205ENST00000506747 LRCH3Q96II8 777 aa9.67□□□□□ -0.86
CLOCK-205ENST00000506747 HPS5Q9UPZ3 1129 aa9.67□□□□□ -0.86
CLOCK-205ENST00000506747 NRG2O14511 850 aaPredicted RBP9.6□□□□□ -0.87
CLOCK-205ENST00000506747 PPP4CP60510 307 aa9.6□□□□□ -0.87
CLOCK-205ENST00000506747 SPDYE16A6NNV3 312 aaPredicted RBP9.59□□□□□ -0.87
CLOCK-205ENST00000506747 PDIA6Q15084 440 aa9.59□□□□□ -0.87
CLOCK-205ENST00000506747 PRKD2Q9BZL6 878 aa9.59□□□□□ -0.87
CLOCK-205ENST00000506747 TJAP1Q5JTD0 557 aa9.58□□□□□ -0.88
CLOCK-205ENST00000506747 PACS2Q86VP3 889 aa9.58□□□□□ -0.88
CLOCK-205ENST00000506747 DDX12PQ92771 950 aa9.58□□□□□ -0.88
CLOCK-205ENST00000506747 RBM33Q96EV2 1170 aaKnown RBP9.57□□□□□ -0.88
CLOCK-205ENST00000506747 ARIH1Q9Y4X5 557 aaPredicted RBP9.57□□□□□ -0.88
CLOCK-205ENST00000506747 PRKCSHP14314 528 aaPredicted RBP9.56□□□□□ -0.88
CLOCK-205ENST00000506747 V9GY48 417 aaPredicted RBP9.56□□□□□ -0.88
CLOCK-205ENST00000506747 TSKSQ9UJT2 592 aa9.55□□□□□ -0.88
CLOCK-205ENST00000506747 NBR1Q14596 966 aa9.54□□□□□ -0.88
CLOCK-205ENST00000506747 PPP1R18Q6NYC8 613 aa9.54□□□□□ -0.88
CLOCK-205ENST00000506747 IL21Q9HBE4 155 aa9.54□□□□□ -0.88
CLOCK-205ENST00000506747 KCNV2Q8TDN2 545 aa9.53□□□□□ -0.88
CLOCK-205ENST00000506747 MTRQ99707 1265 aa9.52□□□□□ -0.89
CLOCK-205ENST00000506747 GRXCR2A6NFK2 248 aa9.51□□□□□ -0.89
CLOCK-205ENST00000506747 EN1Q05925 392 aaPredicted RBP9.51□□□□□ -0.89
CLOCK-205ENST00000506747 SAMD7Q7Z3H4 446 aa9.51□□□□□ -0.89
CLOCK-205ENST00000506747 MAP3K7O43318 606 aa9.5□□□□□ -0.89
CLOCK-205ENST00000506747 ARHGEF1Q92888 912 aaKnown RBP9.5□□□□□ -0.89
CLOCK-205ENST00000506747 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.5□□□□□ -0.89
CLOCK-205ENST00000506747 TSR1Q2NL82 804 aaKnown RBP9.49□□□□□ -0.89
CLOCK-205ENST00000506747 P3H3Q8IVL6 736 aa9.49□□□□□ -0.89
CLOCK-205ENST00000506747 LOC100996750A0A140TA64 210 aa9.48□□□□□ -0.89
CLOCK-205ENST00000506747 KRTAP4-6Q9BYQ5 205 aa9.48□□□□□ -0.89
CLOCK-205ENST00000506747 PDZRN3Q9UPQ7 1066 aa9.48□□□□□ -0.89
CLOCK-205ENST00000506747 CDCA7LQ96GN5 454 aa9.47□□□□□ -0.89
CLOCK-205ENST00000506747 SMAPO00193 183 aa9.46□□□□□ -0.9
CLOCK-205ENST00000506747 PRSS12P56730 875 aa9.46□□□□□ -0.9
CLOCK-205ENST00000506747 TPRNQ4KMQ1 711 aa9.46□□□□□ -0.9
CLOCK-205ENST00000506747 CERKQ8TCT0 537 aa9.45□□□□□ -0.9
CLOCK-205ENST00000506747 ZNF516Q92618 1163 aa9.45□□□□□ -0.9
CLOCK-205ENST00000506747 TATDN2Q93075 761 aa9.43□□□□□ -0.9
CLOCK-205ENST00000506747 FAM198AQ9UFP1 575 aa9.43□□□□□ -0.9
CLOCK-205ENST00000506747 NBPF26B4DH59 902 aa9.42□□□□□ -0.9
CLOCK-205ENST00000506747 GGCXP38435 758 aa9.42□□□□□ -0.9
CLOCK-205ENST00000506747 HDGFP51858 240 aaKnown RBP9.42□□□□□ -0.9
CLOCK-205ENST00000506747 OSBPP22059 807 aa9.41□□□□□ -0.9
CLOCK-205ENST00000506747 PNMA3Q9UL41 463 aa9.41□□□□□ -0.9
CLOCK-205ENST00000506747 APLP1P51693 650 aa9.4□□□□□ -0.9
CLOCK-205ENST00000506747 C3orf80F5H4A9 247 aa9.39□□□□□ -0.91
CLOCK-205ENST00000506747 PRIM1P49642 420 aaKnown RBP9.39□□□□□ -0.91
CLOCK-205ENST00000506747 NKX2-3Q8TAU0 364 aa9.39□□□□□ -0.91
CLOCK-205ENST00000506747 NECTIN2Q92692 538 aa9.39□□□□□ -0.91
CLOCK-205ENST00000506747 TMUB1Q9BVT8 246 aa9.39□□□□□ -0.91
CLOCK-205ENST00000506747 RNF40O75150 1001 aa9.37□□□□□ -0.91
CLOCK-205ENST00000506747 MLLT3P42568 568 aaPredicted RBP9.37□□□□□ -0.91
CLOCK-205ENST00000506747 NUDT18Q6ZVK8 323 aa9.36□□□□□ -0.91
CLOCK-205ENST00000506747 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms