RNA–Protein interactions for RNA: ENST00000506747.5

CLOCK-205, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 1,337 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-205ENST00000506747 AEBP2Q6ZN18 517 aaPredicted RBP25.09■■□□□ 1.61
CLOCK-205ENST00000506747 CHIC1Q5VXU3 224 aa23.51■■□□□ 1.35
CLOCK-205ENST00000506747 SENP3Q9H4L4 574 aaPredicted RBP21.52■■□□□ 1.03
CLOCK-205ENST00000506747 PHF23Q9BUL5 403 aaPredicted RBP21.17■□□□□ 0.98
CLOCK-205ENST00000506747 POTEDQ86YR6 584 aa20.66■□□□□ 0.9
CLOCK-205ENST00000506747 FOXD1Q16676 465 aa20.2■□□□□ 0.82
CLOCK-205ENST00000506747 MSH5O43196 834 aa19.26■□□□□ 0.67
CLOCK-205ENST00000506747 PIAS4Q8N2W9 510 aaPredicted RBP18.66■□□□□ 0.58
CLOCK-205ENST00000506747 PLPPR3Q6T4P5 718 aa18.63■□□□□ 0.57
CLOCK-205ENST00000506747 PPP6R1Q9UPN7 881 aa18.47■□□□□ 0.55
CLOCK-205ENST00000506747 ADRA2BP18089 450 aa18.38■□□□□ 0.53
CLOCK-205ENST00000506747 CACNB1Q02641 598 aaPredicted RBP17.26■□□□□ 0.35
CLOCK-205ENST00000506747 DMRT2Q9Y5R5 561 aa16.99■□□□□ 0.31
CLOCK-205ENST00000506747 MAPK8IP2Q13387 824 aaPredicted RBP16.98■□□□□ 0.31
CLOCK-205ENST00000506747 SCAF1Q9H7N4 1312 aaKnown RBP16.89■□□□□ 0.29
CLOCK-205ENST00000506747 DCAF8L1A6NGE4 600 aa16.38■□□□□ 0.21
CLOCK-205ENST00000506747 RNF39Q9H2S5 420 aa16.35■□□□□ 0.21
CLOCK-205ENST00000506747 PPP4R3CPQ6ZMV5 832 aa16.26■□□□□ 0.19
CLOCK-205ENST00000506747 HOXD11P31277 338 aaPredicted RBP16.22■□□□□ 0.19
CLOCK-205ENST00000506747 CNKSR2Q8WXI2 1034 aa16.06■□□□□ 0.16
CLOCK-205ENST00000506747 C1QBPQ07021 282 aaKnown RBP16.02■□□□□ 0.16
CLOCK-205ENST00000506747 RNF216Q9NWF9 866 aaPredicted RBP16.01■□□□□ 0.15
CLOCK-205ENST00000506747 POTEHQ6S545 545 aa15.98■□□□□ 0.15
CLOCK-205ENST00000506747 DNAJC5BQ9UF47 199 aa15.79■□□□□ 0.12
CLOCK-205ENST00000506747 NCBP3Q53F19 620 aaKnown RBP15.56■□□□□ 0.08
CLOCK-205ENST00000506747 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.45■□□□□ 0.06
CLOCK-205ENST00000506747 NPM3O75607 178 aaKnown RBP15.29■□□□□ 0.04
CLOCK-205ENST00000506747 U3KPZ7 1027 aaPredicted RBP15.07■□□□□ 0
CLOCK-205ENST00000506747 DSG3P32926 999 aa14.97□□□□□ -0.01
CLOCK-205ENST00000506747 CAPN15O75808 1086 aa14.96□□□□□ -0.01
CLOCK-205ENST00000506747 SPINK5Q9NQ38 1064 aaPredicted RBP14.95□□□□□ -0.02
CLOCK-205ENST00000506747 SLC4A2P04920 1241 aa14.69□□□□□ -0.06
CLOCK-205ENST00000506747 APLP2Q06481 763 aa14.67□□□□□ -0.06
CLOCK-205ENST00000506747 KCNA4P22459 653 aa14.66□□□□□ -0.06
CLOCK-205ENST00000506747 TRHP20396 242 aaPredicted RBP14.63□□□□□ -0.07
CLOCK-205ENST00000506747 ZNF219Q9P2Y4 722 aaPredicted RBP14.62□□□□□ -0.07
CLOCK-205ENST00000506747 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.57□□□□□ -0.08
CLOCK-205ENST00000506747 HNRNPUL2Q1KMD3 747 aaKnown RBP14.57□□□□□ -0.08
CLOCK-205ENST00000506747 ABCB7O75027 752 aa14.56□□□□□ -0.08
CLOCK-205ENST00000506747 SP7Q8TDD2 431 aaPredicted RBP14.47□□□□□ -0.09
CLOCK-205ENST00000506747 SAMD1Q6SPF0 538 aaPredicted RBP14.45□□□□□ -0.1
CLOCK-205ENST00000506747 CHRDL2Q6WN34 429 aa14.43□□□□□ -0.1
CLOCK-205ENST00000506747 RBM42Q9BTD8 480 aaKnown RBP14.33□□□□□ -0.12
CLOCK-205ENST00000506747 MYCNP04198 464 aaPredicted RBP14.17□□□□□ -0.14
CLOCK-205ENST00000506747 POLA2Q14181 598 aa14.16□□□□□ -0.14
CLOCK-205ENST00000506747 HAX1O00165 279 aa13.95□□□□□ -0.18
CLOCK-205ENST00000506747 AKT1S1Q96B36 256 aa13.91□□□□□ -0.18
CLOCK-205ENST00000506747 SLC4A1APQ9BWU0 796 aaKnown RBP13.91□□□□□ -0.18
CLOCK-205ENST00000506747 ZBTB12Q9Y330 459 aaPredicted RBP13.89□□□□□ -0.19
CLOCK-205ENST00000506747 PIP4P2Q8N4L2 257 aa13.88□□□□□ -0.19
CLOCK-205ENST00000506747 ATF5Q9Y2D1 282 aaPredicted RBP13.83□□□□□ -0.2
CLOCK-205ENST00000506747 FOXD4L1Q9NU39 408 aa13.82□□□□□ -0.2
CLOCK-205ENST00000506747 REM2Q8IYK8 340 aaPredicted RBP13.76□□□□□ -0.21
CLOCK-205ENST00000506747 OSCARQ8IYS5 282 aa13.7□□□□□ -0.22
CLOCK-205ENST00000506747 PLSCR2Q9NRY7 297 aa13.7□□□□□ -0.22
CLOCK-205ENST00000506747 EVX2Q03828 476 aa13.69□□□□□ -0.22
CLOCK-205ENST00000506747 PITPNM1O00562 1244 aa13.61□□□□□ -0.23
CLOCK-205ENST00000506747 FXR2P51116 673 aaKnown RBP eCLIP13.59□□□□□ -0.23
CLOCK-205ENST00000506747 LHX8Q68G74 356 aa13.58□□□□□ -0.24
CLOCK-205ENST00000506747 ATXN8OSP0DMR3 200 aa13.46□□□□□ -0.25
CLOCK-205ENST00000506747 ZBTB22O15209 634 aa13.44□□□□□ -0.26
CLOCK-205ENST00000506747 SPDYE2BA6NHP3 402 aa13.4□□□□□ -0.26
CLOCK-205ENST00000506747 SPDYE6P0CI01 402 aa13.4□□□□□ -0.26
CLOCK-205ENST00000506747 SPDYE2Q495Y8 402 aa13.4□□□□□ -0.26
CLOCK-205ENST00000506747 FBLN2P98095 1184 aa13.38□□□□□ -0.27
CLOCK-205ENST00000506747 GABBR2O75899 941 aa13.29□□□□□ -0.28
CLOCK-205ENST00000506747 SPDYE1Q8NFV5 336 aaPredicted RBP13.27□□□□□ -0.29
CLOCK-205ENST00000506747 PRKAR2AP13861 404 aaKnown RBP13.26□□□□□ -0.29
CLOCK-205ENST00000506747 CLEC11AQ9Y240 323 aa13.24□□□□□ -0.29
CLOCK-205ENST00000506747 C19orf67A6NJJ6 358 aa13.18□□□□□ -0.3
CLOCK-205ENST00000506747 MKRN4PQ13434 485 aaPredicted RBP13.18□□□□□ -0.3
CLOCK-205ENST00000506747 EHMT2Q96KQ7 1210 aa13.17□□□□□ -0.3
CLOCK-205ENST00000506747 ZNF692Q9BU19 519 aaPredicted RBP13.17□□□□□ -0.3
CLOCK-205ENST00000506747 SSUH2Q9Y2M2 353 aa13.17□□□□□ -0.3
CLOCK-205ENST00000506747 CSRNP3Q8WYN3 585 aa13.12□□□□□ -0.31
CLOCK-205ENST00000506747 POTEIP0CG38 1075 aa13.01□□□□□ -0.33
CLOCK-205ENST00000506747 CHADLQ6NUI6 762 aa13□□□□□ -0.33
CLOCK-205ENST00000506747 PRR29P0C7W0 189 aa12.98□□□□□ -0.33
CLOCK-205ENST00000506747 PABPN1Q86U42 306 aaKnown RBP eCLIP12.96□□□□□ -0.33
CLOCK-205ENST00000506747 POTEMA6NI47 508 aa12.87□□□□□ -0.35
CLOCK-205ENST00000506747 CD44P16070 742 aaKnown RBP12.81□□□□□ -0.36
CLOCK-205ENST00000506747 FARP1Q9Y4F1 1045 aaPredicted RBP12.81□□□□□ -0.36
CLOCK-205ENST00000506747 CLCN6P51797 869 aa12.79□□□□□ -0.36
CLOCK-205ENST00000506747 POTEGQ6S5H5 508 aa12.78□□□□□ -0.36
CLOCK-205ENST00000506747 DCBLD2Q96PD2 775 aa12.73□□□□□ -0.37
CLOCK-205ENST00000506747 OTUD5Q96G74 571 aa12.72□□□□□ -0.37
CLOCK-205ENST00000506747 ZNF579Q8NAF0 562 aaKnown RBP12.61□□□□□ -0.39
CLOCK-205ENST00000506747 PCDH10Q9P2E7 1040 aa12.6□□□□□ -0.39
CLOCK-205ENST00000506747 POTEB2H3BUK9 544 aa12.58□□□□□ -0.4
CLOCK-205ENST00000506747 ZRANB1Q9UGI0 708 aa12.58□□□□□ -0.4
CLOCK-205ENST00000506747 STAG3Q9UJ98 1225 aa12.58□□□□□ -0.4
CLOCK-205ENST00000506747 CREBZFQ9NS37 354 aa12.56□□□□□ -0.4
CLOCK-205ENST00000506747 GALR2O43603 387 aaPredicted RBP12.46□□□□□ -0.41
CLOCK-205ENST00000506747 PAK3O75914 559 aaPredicted RBP12.42□□□□□ -0.42
CLOCK-205ENST00000506747 SPDYE4A6NLX3 237 aa12.39□□□□□ -0.43
CLOCK-205ENST00000506747 NPM1P06748 294 aaKnown RBP eCLIP12.36□□□□□ -0.43
CLOCK-205ENST00000506747 PHF12Q96QT6 1004 aa12.34□□□□□ -0.43
CLOCK-205ENST00000506747 LCE2DQ5TA82 110 aaPredicted RBP12.32□□□□□ -0.44
CLOCK-205ENST00000506747 MNX1P50219 401 aaPredicted RBP12.3□□□□□ -0.44
CLOCK-205ENST00000506747 FAM163AQ96GL9 167 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms