RNA–Protein interactions for RNA: ENST00000505423.1

AP3S1-203, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 2

Gene AP3S1, Length 611 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-203ENST00000505423 RABGEF1Q9UJ41 708 aa9.38□□□□□ -0.91
AP3S1-203ENST00000505423 COL9A1P20849 921 aa9.37□□□□□ -0.91
AP3S1-203ENST00000505423 IFFO2Q5TF58 517 aa9.35□□□□□ -0.91
AP3S1-203ENST00000505423 DPYSL4O14531 572 aa9.34□□□□□ -0.91
AP3S1-203ENST00000505423 A0A0G2JS52 829 aa9.33□□□□□ -0.92
AP3S1-203ENST00000505423 RGS20O76081 388 aa9.33□□□□□ -0.92
AP3S1-203ENST00000505423 EPAS1Q99814 870 aa9.33□□□□□ -0.92
AP3S1-203ENST00000505423 KIAA1468Q9P260 1216 aa9.33□□□□□ -0.92
AP3S1-203ENST00000505423 BCAMP50895 628 aa9.32□□□□□ -0.92
AP3S1-203ENST00000505423 LAPTM4BQ86VI4 370 aa9.32□□□□□ -0.92
AP3S1-203ENST00000505423 RBM33Q96EV2 1170 aaKnown RBP9.32□□□□□ -0.92
AP3S1-203ENST00000505423 C6orf132Q5T0Z8 1188 aa9.31□□□□□ -0.92
AP3S1-203ENST00000505423 CAMK2BQ13554 666 aa9.3□□□□□ -0.92
AP3S1-203ENST00000505423 DDX12PQ92771 950 aa9.3□□□□□ -0.92
AP3S1-203ENST00000505423 IRX2Q9BZI1 471 aaPredicted RBP9.3□□□□□ -0.92
AP3S1-203ENST00000505423 SEPT9Q9UHD8 586 aaPredicted RBP9.3□□□□□ -0.92
AP3S1-203ENST00000505423 SOWAHBA6NEL2 793 aa9.29□□□□□ -0.92
AP3S1-203ENST00000505423 ZFRQ96KR1 1074 aaKnown RBP9.29□□□□□ -0.92
AP3S1-203ENST00000505423 ONECUT3O60422 494 aaPredicted RBP9.27□□□□□ -0.93
AP3S1-203ENST00000505423 TRIM6-TRIM34B2RNG4 842 aa9.26□□□□□ -0.93
AP3S1-203ENST00000505423 NBR1Q14596 966 aa9.25□□□□□ -0.93
AP3S1-203ENST00000505423 NYAP1Q6ZVC0 841 aa9.25□□□□□ -0.93
AP3S1-203ENST00000505423 BBXQ8WY36 941 aaPredicted RBP9.25□□□□□ -0.93
AP3S1-203ENST00000505423 WBP1LQ9NX94 342 aa9.25□□□□□ -0.93
AP3S1-203ENST00000505423 MAP3K7O43318 606 aa9.24□□□□□ -0.93
AP3S1-203ENST00000505423 ITGBL1O95965 494 aaPredicted RBP9.24□□□□□ -0.93
AP3S1-203ENST00000505423 FAM98CQ17RN3 349 aaKnown RBP9.24□□□□□ -0.93
AP3S1-203ENST00000505423 LRCH3Q96II8 777 aa9.23□□□□□ -0.93
AP3S1-203ENST00000505423 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.23□□□□□ -0.93
AP3S1-203ENST00000505423 KCNC4Q03721 635 aa9.22□□□□□ -0.93
AP3S1-203ENST00000505423 PACS2Q86VP3 889 aa9.22□□□□□ -0.93
AP3S1-203ENST00000505423 TSR3Q9UJK0 312 aaKnown RBP9.21□□□□□ -0.94
AP3S1-203ENST00000505423 HPS5Q9UPZ3 1129 aa9.21□□□□□ -0.94
AP3S1-203ENST00000505423 EN1Q05925 392 aaPredicted RBP9.2□□□□□ -0.94
AP3S1-203ENST00000505423 TSR1Q2NL82 804 aaKnown RBP9.2□□□□□ -0.94
AP3S1-203ENST00000505423 SPRYD3Q8NCJ5 442 aa9.19□□□□□ -0.94
AP3S1-203ENST00000505423 PDIA6Q15084 440 aa9.18□□□□□ -0.94
AP3S1-203ENST00000505423 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.18□□□□□ -0.94
AP3S1-203ENST00000505423 SPDYE16A6NNV3 312 aaPredicted RBP9.17□□□□□ -0.94
AP3S1-203ENST00000505423 PPP4CP60510 307 aa9.16□□□□□ -0.94
AP3S1-203ENST00000505423 TSKSQ9UJT2 592 aa9.16□□□□□ -0.94
AP3S1-203ENST00000505423 WDR70Q9NW82 654 aa9.15□□□□□ -0.94
AP3S1-203ENST00000505423 GRXCR2A6NFK2 248 aa9.14□□□□□ -0.95
AP3S1-203ENST00000505423 E2F4Q16254 413 aa9.14□□□□□ -0.95
AP3S1-203ENST00000505423 CDCA7LQ96GN5 454 aa9.14□□□□□ -0.95
AP3S1-203ENST00000505423 SMAPO00193 183 aa9.13□□□□□ -0.95
AP3S1-203ENST00000505423 PRSS12P56730 875 aa9.12□□□□□ -0.95
AP3S1-203ENST00000505423 Q6ZNB5 142 aa9.12□□□□□ -0.95
AP3S1-203ENST00000505423 SAMD7Q7Z3H4 446 aa9.12□□□□□ -0.95
AP3S1-203ENST00000505423 CERKQ8TCT0 537 aa9.11□□□□□ -0.95
AP3S1-203ENST00000505423 CFAP44Q96MT7 982 aa9.11□□□□□ -0.95
AP3S1-203ENST00000505423 NBPF26B4DH59 902 aa9.1□□□□□ -0.95
AP3S1-203ENST00000505423 RNF40O75150 1001 aa9.1□□□□□ -0.95
AP3S1-203ENST00000505423 PNMA3Q9UL41 463 aa9.1□□□□□ -0.95
AP3S1-203ENST00000505423 HDGFP51858 240 aaKnown RBP9.09□□□□□ -0.95
AP3S1-203ENST00000505423 PAXIP1Q6ZW49 1069 aaPredicted RBP9.08□□□□□ -0.96
AP3S1-203ENST00000505423 TATDN2Q93075 761 aa9.08□□□□□ -0.96
AP3S1-203ENST00000505423 PRIM1P49642 420 aaKnown RBP9.06□□□□□ -0.96
AP3S1-203ENST00000505423 FAM198AQ9UFP1 575 aa9.06□□□□□ -0.96
AP3S1-203ENST00000505423 NUDT18Q6ZVK8 323 aa9.04□□□□□ -0.96
AP3S1-203ENST00000505423 CDHR5Q9HBB8 845 aa9.04□□□□□ -0.96
AP3S1-203ENST00000505423 C3orf80F5H4A9 247 aa9.03□□□□□ -0.96
AP3S1-203ENST00000505423 OSBPP22059 807 aa9.03□□□□□ -0.96
AP3S1-203ENST00000505423 TJAP1Q5JTD0 557 aa9.03□□□□□ -0.96
AP3S1-203ENST00000505423 MTRQ99707 1265 aa9.03□□□□□ -0.96
AP3S1-203ENST00000505423 IL21Q9HBE4 155 aa9.03□□□□□ -0.96
AP3S1-203ENST00000505423 ARIH1Q9Y4X5 557 aaPredicted RBP9.03□□□□□ -0.96
AP3S1-203ENST00000505423 LAPTM4AQ15012 233 aa9.02□□□□□ -0.97
AP3S1-203ENST00000505423 GFRA3O60609 400 aa9.01□□□□□ -0.97
AP3S1-203ENST00000505423 PRKD2Q9BZL6 878 aa9□□□□□ -0.97
AP3S1-203ENST00000505423 RBM27Q9P2N5 1060 aaKnown RBP9□□□□□ -0.97
AP3S1-203ENST00000505423 SLC4A3P48751 1232 aa8.99□□□□□ -0.97
AP3S1-203ENST00000505423 PLCB2Q00722 1185 aa8.99□□□□□ -0.97
AP3S1-203ENST00000505423 PPP1R18Q6NYC8 613 aa8.99□□□□□ -0.97
AP3S1-203ENST00000505423 NECTIN2Q92692 538 aa8.98□□□□□ -0.97
AP3S1-203ENST00000505423 APLP1P51693 650 aa8.97□□□□□ -0.97
AP3S1-203ENST00000505423 PADI6Q6TGC4 694 aa8.97□□□□□ -0.97
AP3S1-203ENST00000505423 SLF2Q8IX21 1173 aa8.97□□□□□ -0.97
AP3S1-203ENST00000505423 ZNF516Q92618 1163 aa8.97□□□□□ -0.97
AP3S1-203ENST00000505423 SWT1Q5T5J6 900 aaKnown RBP8.96□□□□□ -0.98
AP3S1-203ENST00000505423 COPS2P61201 443 aa8.95□□□□□ -0.98
AP3S1-203ENST00000505423 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.95□□□□□ -0.98
AP3S1-203ENST00000505423 GGCXP38435 758 aa8.94□□□□□ -0.98
AP3S1-203ENST00000505423 TRAF7Q6Q0C0 670 aa8.93□□□□□ -0.98
AP3S1-203ENST00000505423 V9GY48 417 aaPredicted RBP8.93□□□□□ -0.98
AP3S1-203ENST00000505423 NKX2-3Q8TAU0 364 aa8.92□□□□□ -0.98
AP3S1-203ENST00000505423 NPDC1Q9NQX5 325 aaPredicted RBP8.92□□□□□ -0.98
AP3S1-203ENST00000505423 NRG2O14511 850 aaPredicted RBP8.91□□□□□ -0.98
AP3S1-203ENST00000505423 TTC13Q8NBP0 860 aa8.91□□□□□ -0.98
AP3S1-203ENST00000505423 PRR14Q9BWN1 585 aa8.89□□□□□ -0.99
AP3S1-203ENST00000505423 TSHZ2Q9NRE2 1034 aa8.89□□□□□ -0.99
AP3S1-203ENST00000505423 EYA1Q99502 592 aa8.88□□□□□ -0.99
AP3S1-203ENST00000505423 PDZRN3Q9UPQ7 1066 aa8.88□□□□□ -0.99
AP3S1-203ENST00000505423 ZPR1O75312 459 aa8.87□□□□□ -0.99
AP3S1-203ENST00000505423 PCDHB3Q9Y5E6 796 aa8.87□□□□□ -0.99
AP3S1-203ENST00000505423 MLLT3P42568 568 aaPredicted RBP8.86□□□□□ -0.99
AP3S1-203ENST00000505423 ARHGEF1Q92888 912 aaKnown RBP8.86□□□□□ -0.99
AP3S1-203ENST00000505423 LCE2BO14633 110 aa8.85□□□□□ -0.99
AP3S1-203ENST00000505423 TMUB1Q9BVT8 246 aa8.85□□□□□ -0.99
AP3S1-203ENST00000505423 DNAJB2P25686 324 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms