RNA–Protein interactions for RNA: ENST00000505081.5

DDX41-205, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,949 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-205ENST00000505081 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.63■■□□□ 1.053e-8■■■□□ 16.5
DDX41-205ENST00000505081 NBPF1Q3BBV0 1214 aa21.62■■□□□ 1.05
DDX41-205ENST00000505081 RNF123Q5XPI4 1314 aa21.62■■□□□ 1.05
DDX41-205ENST00000505081 SAMD9LQ8IVG5 1584 aa21.61■■□□□ 1.05
DDX41-205ENST00000505081 CCDC136Q96JN2 1154 aa21.61■■□□□ 1.05
DDX41-205ENST00000505081 FAM135AQ9P2D6 1515 aa21.6■■□□□ 1.05
DDX41-205ENST00000505081 MYBBP1AQ9BQG0 1328 aaKnown RBP21.6■■□□□ 1.05
DDX41-205ENST00000505081 CCDC141Q6ZP82 1450 aa21.59■■□□□ 1.05
DDX41-205ENST00000505081 CDC42BPBQ9Y5S2 1711 aa21.59■■□□□ 1.05
DDX41-205ENST00000505081 ARHGEF5Q12774 1597 aa21.59■■□□□ 1.05
DDX41-205ENST00000505081 LRPPRCP42704 1394 aaKnown RBP21.58■■□□□ 1.04
DDX41-205ENST00000505081 CCDC144AA2RUR9 1427 aa21.56■■□□□ 1.04
DDX41-205ENST00000505081 RALBP1Q15311 655 aa21.56■■□□□ 1.04
DDX41-205ENST00000505081 BRD4O60885 1362 aaPredicted RBP21.55■■□□□ 1.04
DDX41-205ENST00000505081 PRAG1Q86YV5 1406 aa21.54■■□□□ 1.04
DDX41-205ENST00000505081 SYCP2Q9BX26 1530 aa21.54■■□□□ 1.04
DDX41-205ENST00000505081 PLA2R1Q13018 1463 aa21.53■■□□□ 1.04
DDX41-205ENST00000505081 E9PCH4 1651 aa21.53■■□□□ 1.04
DDX41-205ENST00000505081 PREX2Q70Z35 1606 aa21.52■■□□□ 1.04
DDX41-205ENST00000505081 TRPM1Q7Z4N2 1603 aa21.51■■□□□ 1.03
DDX41-205ENST00000505081 CC2D1BQ5T0F9 858 aaKnown RBP21.5■■□□□ 1.03
DDX41-205ENST00000505081 A2MP01023 1474 aa21.49■■□□□ 1.03
DDX41-205ENST00000505081 ARHGAP5Q13017 1502 aa21.49■■□□□ 1.03
DDX41-205ENST00000505081 TTC37Q6PGP7 1564 aa21.49■■□□□ 1.03
DDX41-205ENST00000505081 PER1O15534 1290 aaPredicted RBP21.48■■□□□ 1.03
DDX41-205ENST00000505081 KTN1Q86UP2 1357 aaKnown RBP21.48■■□□□ 1.03
DDX41-205ENST00000505081 DISP3Q9P2K9 1392 aa21.48■■□□□ 1.03
DDX41-205ENST00000505081 NLRP13Q86W25 1043 aa21.48■■□□□ 1.03
DDX41-205ENST00000505081 BCL11AQ9H165 835 aa21.48■■□□□ 1.03
DDX41-205ENST00000505081 PLEKHH2Q8IVE3 1493 aa21.47■■□□□ 1.03
DDX41-205ENST00000505081 PAK3O75914 559 aaPredicted RBP21.47■■□□□ 1.03
DDX41-205ENST00000505081 EXOC6Q8TAG9 804 aa21.47■■□□□ 1.03
DDX41-205ENST00000505081 PARD3Q8TEW0 1356 aa21.47■■□□□ 1.03
DDX41-205ENST00000505081 RRP1P56182 461 aaKnown RBP21.46■■□□□ 1.03
DDX41-205ENST00000505081 RSPH4AQ5TD94 716 aa21.46■■□□□ 1.03
DDX41-205ENST00000505081 CDCA7LQ96GN5 454 aa21.46■■□□□ 1.03
DDX41-205ENST00000505081 TESK2Q96S53 571 aa21.45■■□□□ 1.02
DDX41-205ENST00000505081 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.44■■□□□ 1.02
DDX41-205ENST00000505081 RCAN3Q9UKA8 241 aa21.43■■□□□ 1.02
DDX41-205ENST00000505081 PANK3Q9H999 370 aa21.43■■□□□ 1.02
DDX41-205ENST00000505081 NOP58Q9Y2X3 529 aaKnown RBP21.41■■□□□ 1.02
DDX41-205ENST00000505081 UNC13BO14795 1591 aa21.41■■□□□ 1.02
DDX41-205ENST00000505081 GPRASP1Q5JY77 1395 aa21.41■■□□□ 1.02
DDX41-205ENST00000505081 COL17A1Q9UMD9 1497 aaPredicted RBP21.4■■□□□ 1.02
DDX41-205ENST00000505081 ERCC6L2Q5T890 1561 aa21.4■■□□□ 1.02
DDX41-205ENST00000505081 MYO5CQ9NQX4 1742 aa21.37■■□□□ 1.01
DDX41-205ENST00000505081 ERBINQ96RT1 1412 aa21.37■■□□□ 1.01
DDX41-205ENST00000505081 CHD1O14646 1710 aa21.37■■□□□ 1.01
DDX41-205ENST00000505081 PLIN1O60240 522 aa21.37■■□□□ 1.01
DDX41-205ENST00000505081 PRDM15P57071 1507 aaPredicted RBP21.36■■□□□ 1.01
DDX41-205ENST00000505081 MAST1Q9Y2H9 1570 aa21.36■■□□□ 1.01
DDX41-205ENST00000505081 NBR1Q14596 966 aa21.36■■□□□ 1.01
DDX41-205ENST00000505081 IQGAP3Q86VI3 1631 aa21.35■■□□□ 1.01
DDX41-205ENST00000505081 TMF1P82094 1093 aa21.33■■□□□ 1.01
DDX41-205ENST00000505081 ANP32AP39687 249 aaKnown RBP21.32■■□□□ 1
DDX41-205ENST00000505081 PLXNC1O60486 1568 aa21.31■■□□□ 1
DDX41-205ENST00000505081 PDE3BQ13370 1112 aa21.31■■□□□ 1
DDX41-205ENST00000505081 IPO9Q96P70 1041 aaKnown RBP21.3■■□□□ 1
DDX41-205ENST00000505081 SKAP1Q86WV1 359 aa21.29■■□□□ 1
DDX41-205ENST00000505081 DUOX2Q9NRD8 1548 aa21.29■■□□□ 1
DDX41-205ENST00000505081 NPM2Q86SE8 214 aaKnown RBP21.29■■□□□ 1
DDX41-205ENST00000505081 LAMC1P11047 1609 aa21.28■■□□□ 1
DDX41-205ENST00000505081 ABCC2Q92887 1545 aa21.28■■□□□ 1
DDX41-205ENST00000505081 ADAMTS8Q9UP79 889 aa21.27■■□□□ 1
DDX41-205ENST00000505081 TRAPPC8Q9Y2L5 1435 aa21.27■■□□□ 1
DDX41-205ENST00000505081 WASHC2CQ9Y4E1 1318 aa21.26■□□□□ 0.99
DDX41-205ENST00000505081 BLMP54132 1417 aaPredicted RBP21.26■□□□□ 0.99
DDX41-205ENST00000505081 EIF2AK4Q9P2K8 1649 aaKnown RBP21.26■□□□□ 0.99
DDX41-205ENST00000505081 SHROOM2Q13796 1616 aa21.25■□□□□ 0.99
DDX41-205ENST00000505081 ATP10AO60312 1499 aa21.24■□□□□ 0.99
DDX41-205ENST00000505081 MAGI2Q86UL8 1455 aa21.24■□□□□ 0.99
DDX41-205ENST00000505081 EFCAB2Q5VUJ9 269 aa21.24■□□□□ 0.99
DDX41-205ENST00000505081 AFAP1Q8N556 730 aa21.24■□□□□ 0.99
DDX41-205ENST00000505081 CRBNQ96SW2 442 aa21.24■□□□□ 0.99
DDX41-205ENST00000505081 DEKP35659 375 aaKnown RBP21.24■□□□□ 0.99
DDX41-205ENST00000505081 ZBTB47Q9UFB7 747 aaPredicted RBP21.23■□□□□ 0.99
DDX41-205ENST00000505081 PLCH2O75038 1416 aa21.23■□□□□ 0.99
DDX41-205ENST00000505081 C20orf194Q5TEA3 1177 aa21.22■□□□□ 0.99
DDX41-205ENST00000505081 WDR7Q9Y4E6 1490 aa21.21■□□□□ 0.99
DDX41-205ENST00000505081 PDE4AP27815 886 aa21.21■□□□□ 0.99
DDX41-205ENST00000505081 PPP2R1AP30153 589 aa21.2■□□□□ 0.98
DDX41-205ENST00000505081 KNSTRNQ9Y448 316 aa21.2■□□□□ 0.98
DDX41-205ENST00000505081 RNF17Q9BXT8 1623 aaKnown RBP21.2■□□□□ 0.98
DDX41-205ENST00000505081 TCERG1O14776 1098 aaKnown RBP21.2■□□□□ 0.98
DDX41-205ENST00000505081 SPAG9O60271 1321 aaKnown RBP21.18■□□□□ 0.98
DDX41-205ENST00000505081 ZCCHC11Q5TAX3 1644 aaKnown RBP21.17■□□□□ 0.98
DDX41-205ENST00000505081 ABCC1P33527 1531 aa21.17■□□□□ 0.98
DDX41-205ENST00000505081 PLEKHH1Q9ULM0 1364 aa21.17■□□□□ 0.98
DDX41-205ENST00000505081 AMER1Q5JTC6 1135 aaPredicted RBP21.17■□□□□ 0.98
DDX41-205ENST00000505081 MADDQ8WXG6 1647 aa21.17■□□□□ 0.98
DDX41-205ENST00000505081 ZMYM4Q5VZL5 1548 aa21.16■□□□□ 0.98
DDX41-205ENST00000505081 BACH2Q9BYV9 841 aa21.15■□□□□ 0.98
DDX41-205ENST00000505081 WDR43Q15061 677 aaKnown RBP eCLIP21.15■□□□□ 0.98
DDX41-205ENST00000505081 INSRP06213 1382 aa21.12■□□□□ 0.97
DDX41-205ENST00000505081 IQGAP1P46940 1657 aa21.12■□□□□ 0.97
DDX41-205ENST00000505081 CCDC146Q8IYE0 955 aa21.12■□□□□ 0.97
DDX41-205ENST00000505081 MYT1LQ9UL68 1186 aa21.11■□□□□ 0.97
DDX41-205ENST00000505081 CLTCL1P53675 1640 aa21.11■□□□□ 0.97
DDX41-205ENST00000505081 DUSP27Q5VZP5 1158 aa21.1■□□□□ 0.97
DDX41-205ENST00000505081 SCAF11Q99590 1463 aaKnown RBP21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms