RNA–Protein interactions for RNA: ENST00000504875.5

CSF1R-203, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 1 (best)

Gene CSF1R, Length 3,697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-203ENST00000504875 ZBED9Q6R2W3 1325 aa13.07□□□□□ -0.32
CSF1R-203ENST00000504875 SHANK2Q9UPX8 1470 aa13.07□□□□□ -0.32
CSF1R-203ENST00000504875 ADCY10Q96PN6 1610 aa13.07□□□□□ -0.32
CSF1R-203ENST00000504875 TMF1P82094 1093 aa13.07□□□□□ -0.32
CSF1R-203ENST00000504875 CCDC136Q96JN2 1154 aa13.07□□□□□ -0.32
CSF1R-203ENST00000504875 MBD5Q9P267 1494 aa13.05□□□□□ -0.32
CSF1R-203ENST00000504875 ERCC6L2Q5T890 1561 aa13.05□□□□□ -0.32
CSF1R-203ENST00000504875 DEKP35659 375 aaKnown RBP13.05□□□□□ -0.32
CSF1R-203ENST00000504875 PPP4R2Q9NY27 417 aa13.05□□□□□ -0.32
CSF1R-203ENST00000504875 SPATA31E1Q6ZUB1 1445 aa13.05□□□□□ -0.32
CSF1R-203ENST00000504875 FAM135AQ9P2D6 1515 aa13.04□□□□□ -0.32
CSF1R-203ENST00000504875 KTN1Q86UP2 1357 aaKnown RBP13.03□□□□□ -0.32
CSF1R-203ENST00000504875 SAMD9LQ8IVG5 1584 aa13.03□□□□□ -0.32
CSF1R-203ENST00000504875 KANK1Q14678 1352 aa13.03□□□□□ -0.32
CSF1R-203ENST00000504875 RALBP1Q15311 655 aa13.03□□□□□ -0.32
CSF1R-203ENST00000504875 ARID4BQ4LE39 1312 aaPredicted RBP13.03□□□□□ -0.32
CSF1R-203ENST00000504875 NBR1Q14596 966 aa13.02□□□□□ -0.32
CSF1R-203ENST00000504875 GGT6Q6P531 493 aa13.02□□□□□ -0.32
CSF1R-203ENST00000504875 PANK3Q9H999 370 aa13.02□□□□□ -0.32
CSF1R-203ENST00000504875 CROCC2H7BZ55 1655 aa13.02□□□□□ -0.33
CSF1R-203ENST00000504875 MYBBP1AQ9BQG0 1328 aaKnown RBP13.02□□□□□ -0.33
CSF1R-203ENST00000504875 KNSTRNQ9Y448 316 aa13.01□□□□□ -0.33
CSF1R-203ENST00000504875 ABCC2Q92887 1545 aa13.01□□□□□ -0.33
CSF1R-203ENST00000504875 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.01□□□□□ -0.33
CSF1R-203ENST00000504875 TTC37Q6PGP7 1564 aa13.01□□□□□ -0.33
CSF1R-203ENST00000504875 RALGAPBQ86X10 1494 aa13□□□□□ -0.33
CSF1R-203ENST00000504875 RTN4Q9NQC3 1192 aaKnown RBP13□□□□□ -0.33
CSF1R-203ENST00000504875 NUDCQ9Y266 331 aa13□□□□□ -0.33
CSF1R-203ENST00000504875 TRAPPC8Q9Y2L5 1435 aa12.99□□□□□ -0.33
CSF1R-203ENST00000504875 NLRP13Q86W25 1043 aa12.99□□□□□ -0.33
CSF1R-203ENST00000504875 PLCH2O75038 1416 aa12.99□□□□□ -0.33
CSF1R-203ENST00000504875 SCAPERQ9BY12 1400 aa12.98□□□□□ -0.33
CSF1R-203ENST00000504875 ARHGEF5Q12774 1597 aa12.98□□□□□ -0.33
CSF1R-203ENST00000504875 PNISRQ8TF01 805 aaKnown RBP12.98□□□□□ -0.33
CSF1R-203ENST00000504875 DHX29Q7Z478 1369 aaKnown RBP12.98□□□□□ -0.33
CSF1R-203ENST00000504875 MSH5O43196 834 aa12.98□□□□□ -0.33
CSF1R-203ENST00000504875 WDR43Q15061 677 aaKnown RBP eCLIP12.98□□□□□ -0.33
CSF1R-203ENST00000504875 PREX2Q70Z35 1606 aa12.97□□□□□ -0.33
CSF1R-203ENST00000504875 CDC42BPBQ9Y5S2 1711 aa12.97□□□□□ -0.33
CSF1R-203ENST00000504875 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.97□□□□□ -0.33
CSF1R-203ENST00000504875 UHRF1BP1Q6BDS2 1440 aa12.96□□□□□ -0.34
CSF1R-203ENST00000504875 CDCA8Q53HL2 280 aa12.95□□□□□ -0.34
CSF1R-203ENST00000504875 OSCARQ8IYS5 282 aa12.95□□□□□ -0.34
CSF1R-203ENST00000504875 PRAG1Q86YV5 1406 aa12.95□□□□□ -0.34
CSF1R-203ENST00000504875 ARHGEF12Q9NZN5 1544 aa12.95□□□□□ -0.34
CSF1R-203ENST00000504875 NUTM2DQ5VT03 806 aaPredicted RBP12.93□□□□□ -0.34
CSF1R-203ENST00000504875 BCORL1Q5H9F3 1711 aa12.93□□□□□ -0.34
CSF1R-203ENST00000504875 MYO5CQ9NQX4 1742 aa12.93□□□□□ -0.34
CSF1R-203ENST00000504875 DUOX2Q9NRD8 1548 aa12.93□□□□□ -0.34
CSF1R-203ENST00000504875 ERICH6BQ5W0A0 696 aa12.93□□□□□ -0.34
CSF1R-203ENST00000504875 KDM5CP41229 1560 aa12.93□□□□□ -0.34
CSF1R-203ENST00000504875 DISP3Q9P2K9 1392 aa12.92□□□□□ -0.34
CSF1R-203ENST00000504875 BRD4O60885 1362 aaPredicted RBP12.92□□□□□ -0.34
CSF1R-203ENST00000504875 A2MP01023 1474 aa12.91□□□□□ -0.34
CSF1R-203ENST00000504875 CFAP70Q5T0N1 1121 aa12.91□□□□□ -0.34
CSF1R-203ENST00000504875 FANCAO15360 1455 aa12.91□□□□□ -0.34
CSF1R-203ENST00000504875 ERBINQ96RT1 1412 aa12.91□□□□□ -0.34
CSF1R-203ENST00000504875 EIF5BO60841 1220 aaKnown RBP12.91□□□□□ -0.34
CSF1R-203ENST00000504875 TNNT2P45379 298 aaPredicted RBP12.91□□□□□ -0.34
CSF1R-203ENST00000504875 KDM5DQ9BY66 1539 aa12.89□□□□□ -0.35
CSF1R-203ENST00000504875 ADGRL1O94910 1474 aa12.89□□□□□ -0.35
CSF1R-203ENST00000504875 RCAN3Q9UKA8 241 aa12.89□□□□□ -0.35
CSF1R-203ENST00000504875 WASHC2CQ9Y4E1 1318 aa12.89□□□□□ -0.35
CSF1R-203ENST00000504875 PLA2R1Q13018 1463 aa12.89□□□□□ -0.35
CSF1R-203ENST00000504875 ZCCHC11Q5TAX3 1644 aaKnown RBP12.89□□□□□ -0.35
CSF1R-203ENST00000504875 TRAK1Q9UPV9 953 aa12.89□□□□□ -0.35
CSF1R-203ENST00000504875 RTL5Q5HYW3 569 aaPredicted RBP12.88□□□□□ -0.35
CSF1R-203ENST00000504875 TESK2Q96S53 571 aa12.88□□□□□ -0.35
CSF1R-203ENST00000504875 SAFB2Q14151 953 aaKnown RBP eCLIP12.88□□□□□ -0.35
CSF1R-203ENST00000504875 CDCA7LQ96GN5 454 aa12.87□□□□□ -0.35
CSF1R-203ENST00000504875 WDR7Q9Y4E6 1490 aa12.87□□□□□ -0.35
CSF1R-203ENST00000504875 STAG3Q9UJ98 1225 aa12.86□□□□□ -0.35
CSF1R-203ENST00000504875 SMG6Q86US8 1419 aaKnown RBP12.86□□□□□ -0.35
CSF1R-203ENST00000504875 EIF3AQ14152 1382 aaKnown RBP12.86□□□□□ -0.35
CSF1R-203ENST00000504875 ASXL2Q76L83 1435 aa12.85□□□□□ -0.35
CSF1R-203ENST00000504875 CCDC146Q8IYE0 955 aa12.85□□□□□ -0.35
CSF1R-203ENST00000504875 RAPGEF3O95398 923 aa12.85□□□□□ -0.35
CSF1R-203ENST00000504875 NPM2Q86SE8 214 aaKnown RBP12.85□□□□□ -0.35
CSF1R-203ENST00000504875 PLIN1O60240 522 aa12.84□□□□□ -0.35
CSF1R-203ENST00000504875 SHROOM2Q13796 1616 aa12.84□□□□□ -0.35
CSF1R-203ENST00000504875 CYB5RLQ6IPT4 315 aa12.84□□□□□ -0.35
CSF1R-203ENST00000504875 TMEM132EQ6IEE7 984 aa12.84□□□□□ -0.35
CSF1R-203ENST00000504875 MAST1Q9Y2H9 1570 aa12.84□□□□□ -0.35
CSF1R-203ENST00000504875 NEUROD2Q15784 382 aa12.83□□□□□ -0.36
CSF1R-203ENST00000504875 ADAMTS8Q9UP79 889 aa12.83□□□□□ -0.36
CSF1R-203ENST00000504875 PER1O15534 1290 aaPredicted RBP12.83□□□□□ -0.36
CSF1R-203ENST00000504875 EXOC6Q8TAG9 804 aa12.83□□□□□ -0.36
CSF1R-203ENST00000504875 ADGRF5Q8IZF2 1346 aa12.83□□□□□ -0.36
CSF1R-203ENST00000504875 ABCC1P33527 1531 aa12.83□□□□□ -0.36
CSF1R-203ENST00000504875 STK26Q9P289 416 aa12.83□□□□□ -0.36
CSF1R-203ENST00000504875 RRP1P56182 461 aaKnown RBP12.82□□□□□ -0.36
CSF1R-203ENST00000504875 UHRF1BP1LA0JNW5 1464 aa12.81□□□□□ -0.36
CSF1R-203ENST00000504875 PPP2R1AP30153 589 aa12.81□□□□□ -0.36
CSF1R-203ENST00000504875 PDE3BQ13370 1112 aa12.81□□□□□ -0.36
CSF1R-203ENST00000504875 CD109Q6YHK3 1445 aa12.8□□□□□ -0.36
CSF1R-203ENST00000504875 CANXP27824 592 aaKnown RBP12.8□□□□□ -0.36
CSF1R-203ENST00000504875 GPRASP1Q5JY77 1395 aa12.8□□□□□ -0.36
CSF1R-203ENST00000504875 PLXNC1O60486 1568 aa12.8□□□□□ -0.36
CSF1R-203ENST00000504875 ANP32AP39687 249 aaKnown RBP12.8□□□□□ -0.36
CSF1R-203ENST00000504875 STAC3Q96MF2 364 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms