RNA–Protein interactions for RNA: ENST00000503137.1

CCDC11P1-201, Transcript of coiled-coil domain containing 11 pseudogene 1, humanhuman

BASIC

Gene CCDC11P1, Length 1,162 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC11P1-201ENST00000503137 MRC2Q9UBG0 1479 aa9.65□□□□□ -0.87
CCDC11P1-201ENST00000503137 ZNF316A6NFI3 1004 aaPredicted RBP9.64□□□□□ -0.87
CCDC11P1-201ENST00000503137 PCDH10Q9P2E7 1040 aa9.64□□□□□ -0.87
CCDC11P1-201ENST00000503137 UPF1Q92900 1129 aaKnown RBP eCLIP9.63□□□□□ -0.87
CCDC11P1-201ENST00000503137 CUX2O14529 1486 aa9.63□□□□□ -0.87
CCDC11P1-201ENST00000503137 POLA1P09884 1462 aaPredicted RBP9.63□□□□□ -0.87
CCDC11P1-201ENST00000503137 TBC1D12O60347 775 aa9.62□□□□□ -0.87
CCDC11P1-201ENST00000503137 OXER1Q8TDS5 423 aa9.62□□□□□ -0.87
CCDC11P1-201ENST00000503137 KIF21AQ7Z4S6 1674 aa9.61□□□□□ -0.87
CCDC11P1-201ENST00000503137 IGF1RP08069 1367 aa9.61□□□□□ -0.87
CCDC11P1-201ENST00000503137 GOLGA3Q08378 1498 aa9.6□□□□□ -0.87
CCDC11P1-201ENST00000503137 RAD54L2Q9Y4B4 1467 aa9.6□□□□□ -0.87
CCDC11P1-201ENST00000503137 SLC34A2O95436 690 aa9.6□□□□□ -0.87
CCDC11P1-201ENST00000503137 ABCA10Q8WWZ4 1543 aa9.6□□□□□ -0.87
CCDC11P1-201ENST00000503137 TNIKQ9UKE5 1360 aa9.6□□□□□ -0.87
CCDC11P1-201ENST00000503137 PTCD2Q8WV60 388 aaKnown RBP9.59□□□□□ -0.87
CCDC11P1-201ENST00000503137 MLLT3P42568 568 aaPredicted RBP9.58□□□□□ -0.88
CCDC11P1-201ENST00000503137 CARMIL1Q5VZK9 1371 aa9.57□□□□□ -0.88
CCDC11P1-201ENST00000503137 PRXQ9BXM0 1461 aa9.56□□□□□ -0.88
CCDC11P1-201ENST00000503137 TDRD9Q8NDG6 1382 aaKnown RBP9.56□□□□□ -0.88
CCDC11P1-201ENST00000503137 KIF21BO75037 1637 aa9.56□□□□□ -0.88
CCDC11P1-201ENST00000503137 WDR62O43379 1518 aa9.55□□□□□ -0.88
CCDC11P1-201ENST00000503137 IFT140Q96RY7 1462 aa9.54□□□□□ -0.88
CCDC11P1-201ENST00000503137 RAPGEF2Q9Y4G8 1499 aa9.54□□□□□ -0.88
CCDC11P1-201ENST00000503137 EVI5O60447 810 aa9.54□□□□□ -0.88
CCDC11P1-201ENST00000503137 FAM163AQ96GL9 167 aaPredicted RBP9.54□□□□□ -0.88
CCDC11P1-201ENST00000503137 RIMBP2O15034 1052 aa9.53□□□□□ -0.88
CCDC11P1-201ENST00000503137 PTGER2P43116 358 aa9.53□□□□□ -0.88
CCDC11P1-201ENST00000503137 DOK7Q18PE1 504 aa9.53□□□□□ -0.88
CCDC11P1-201ENST00000503137 GPIHBP1Q8IV16 184 aa9.53□□□□□ -0.88
CCDC11P1-201ENST00000503137 ZC3H15Q8WU90 426 aaKnown RBP9.53□□□□□ -0.88
CCDC11P1-201ENST00000503137 GAPVD1Q14C86 1478 aa9.53□□□□□ -0.88
CCDC11P1-201ENST00000503137 ERICH3Q5RHP9 1530 aa9.52□□□□□ -0.88
CCDC11P1-201ENST00000503137 GRXCR2A6NFK2 248 aa9.52□□□□□ -0.89
CCDC11P1-201ENST00000503137 CEP162Q5TB80 1403 aa9.51□□□□□ -0.89
CCDC11P1-201ENST00000503137 RBM26Q5T8P6 1007 aaKnown RBP9.51□□□□□ -0.89
CCDC11P1-201ENST00000503137 PCDHGA4Q9Y5G9 962 aa9.5□□□□□ -0.89
CCDC11P1-201ENST00000503137 TARBP1Q13395 1621 aaKnown RBP9.49□□□□□ -0.89
CCDC11P1-201ENST00000503137 AQRO60306 1485 aaKnown RBP eCLIP9.49□□□□□ -0.89
CCDC11P1-201ENST00000503137 RANGAP1P46060 587 aaPredicted RBP9.48□□□□□ -0.89
CCDC11P1-201ENST00000503137 DDX12PQ92771 950 aa9.48□□□□□ -0.89
CCDC11P1-201ENST00000503137 ZSWIM6Q9HCJ5 1215 aa9.48□□□□□ -0.89
CCDC11P1-201ENST00000503137 THOC2Q8NI27 1593 aaKnown RBP9.47□□□□□ -0.89
CCDC11P1-201ENST00000503137 LCE2DQ5TA82 110 aaPredicted RBP9.47□□□□□ -0.89
CCDC11P1-201ENST00000503137 ANO8Q9HCE9 1232 aaPredicted RBP9.47□□□□□ -0.89
CCDC11P1-201ENST00000503137 CLIP1P30622 1438 aa9.47□□□□□ -0.89
CCDC11P1-201ENST00000503137 GRIN2BQ13224 1484 aa9.47□□□□□ -0.89
CCDC11P1-201ENST00000503137 ABCA5Q8WWZ7 1642 aa9.45□□□□□ -0.9
CCDC11P1-201ENST00000503137 SNPHO15079 494 aa9.45□□□□□ -0.9
CCDC11P1-201ENST00000503137 ZMYND10O75800 440 aa9.45□□□□□ -0.9
CCDC11P1-201ENST00000503137 PHF14O94880 888 aa9.45□□□□□ -0.9
CCDC11P1-201ENST00000503137 OSBPP22059 807 aa9.45□□□□□ -0.9
CCDC11P1-201ENST00000503137 ZNF710Q8N1W2 664 aa9.45□□□□□ -0.9
CCDC11P1-201ENST00000503137 EPAS1Q99814 870 aa9.45□□□□□ -0.9
CCDC11P1-201ENST00000503137 WDR97A6NE52 1622 aa9.45□□□□□ -0.9
CCDC11P1-201ENST00000503137 FHAD1B1AJZ9 1412 aa9.44□□□□□ -0.9
CCDC11P1-201ENST00000503137 ZNF608Q9ULD9 1512 aaPredicted RBP9.44□□□□□ -0.9
CCDC11P1-201ENST00000503137 CUL7Q14999 1698 aa9.44□□□□□ -0.9
CCDC11P1-201ENST00000503137 HOXB3P14651 431 aaPredicted RBP9.43□□□□□ -0.9
CCDC11P1-201ENST00000503137 NUTM2FA1L443 756 aa9.42□□□□□ -0.9
CCDC11P1-201ENST00000503137 CHMP7Q8WUX9 453 aaPredicted RBP9.42□□□□□ -0.9
CCDC11P1-201ENST00000503137 JPH4Q96JJ6 628 aa9.42□□□□□ -0.9
CCDC11P1-201ENST00000503137 ST18O60284 1047 aa9.41□□□□□ -0.9
CCDC11P1-201ENST00000503137 BARGINQ6ZT62 677 aa9.41□□□□□ -0.9
CCDC11P1-201ENST00000503137 EN1Q05925 392 aaPredicted RBP9.4□□□□□ -0.9
CCDC11P1-201ENST00000503137 TYW1BQ6NUM6 668 aa9.4□□□□□ -0.9
CCDC11P1-201ENST00000503137 FBXW7Q969H0 707 aa9.4□□□□□ -0.9
CCDC11P1-201ENST00000503137 FCHSD2O94868 740 aa9.39□□□□□ -0.91
CCDC11P1-201ENST00000503137 NUDT7P0C024 238 aa9.39□□□□□ -0.91
CCDC11P1-201ENST00000503137 ARSIQ5FYB1 569 aa9.39□□□□□ -0.91
CCDC11P1-201ENST00000503137 SLC24A3Q9HC58 644 aa9.39□□□□□ -0.91
CCDC11P1-201ENST00000503137 KDM4FA0A1W2PPD8 638 aa9.38□□□□□ -0.91
CCDC11P1-201ENST00000503137 GPR37O15354 613 aa9.38□□□□□ -0.91
CCDC11P1-201ENST00000503137 HIC1Q14526 733 aa9.38□□□□□ -0.91
CCDC11P1-201ENST00000503137 GPR153Q6NV75 609 aa9.38□□□□□ -0.91
CCDC11P1-201ENST00000503137 KRI1Q8N9T8 703 aaKnown RBP9.38□□□□□ -0.91
CCDC11P1-201ENST00000503137 MAGI1Q96QZ7 1491 aaPredicted RBP9.38□□□□□ -0.91
CCDC11P1-201ENST00000503137 SNAPC4Q5SXM2 1469 aa9.37□□□□□ -0.91
CCDC11P1-201ENST00000503137 MAP3K7O43318 606 aa9.37□□□□□ -0.91
CCDC11P1-201ENST00000503137 TRIM26Q12899 539 aaPredicted RBP9.37□□□□□ -0.91
CCDC11P1-201ENST00000503137 PCDHGA10Q9Y5H3 936 aa9.37□□□□□ -0.91
CCDC11P1-201ENST00000503137 PSDA5PKW4 1024 aaPredicted RBP9.36□□□□□ -0.91
CCDC11P1-201ENST00000503137 VPS8Q8N3P4 1428 aa9.36□□□□□ -0.91
CCDC11P1-201ENST00000503137 EIF4G3O43432 1585 aaKnown RBP9.36□□□□□ -0.91
CCDC11P1-201ENST00000503137 PBRM1Q86U86 1689 aa9.36□□□□□ -0.91
CCDC11P1-201ENST00000503137 GNPATO15228 680 aa9.35□□□□□ -0.91
CCDC11P1-201ENST00000503137 FOSBP53539 338 aa9.35□□□□□ -0.91
CCDC11P1-201ENST00000503137 ZNF454Q8N9F8 522 aa9.35□□□□□ -0.91
CCDC11P1-201ENST00000503137 MARVELD3Q96A59 401 aa9.35□□□□□ -0.91
CCDC11P1-201ENST00000503137 ADAMTS12P58397 1594 aa9.34□□□□□ -0.91
CCDC11P1-201ENST00000503137 KHSRPQ92945 711 aaKnown RBP eCLIP9.34□□□□□ -0.91
CCDC11P1-201ENST00000503137 ZDHHC16Q969W1 377 aa9.34□□□□□ -0.91
CCDC11P1-201ENST00000503137 AK7Q96M32 723 aa9.34□□□□□ -0.91
CCDC11P1-201ENST00000503137 SYNJ2O15056 1496 aa9.34□□□□□ -0.91
CCDC11P1-201ENST00000503137 ARHGAP35Q9NRY4 1499 aa9.34□□□□□ -0.91
CCDC11P1-201ENST00000503137 PRIM1P49642 420 aaKnown RBP9.33□□□□□ -0.92
CCDC11P1-201ENST00000503137 MAP2K5Q13163 448 aa9.33□□□□□ -0.92
CCDC11P1-201ENST00000503137 PTGDRQ13258 359 aa9.33□□□□□ -0.92
CCDC11P1-201ENST00000503137 PPARGC1BQ86YN6 1023 aaKnown RBP9.33□□□□□ -0.92
CCDC11P1-201ENST00000503137 RBM33Q96EV2 1170 aaKnown RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms