RNA–Protein interactions for RNA: ENST00000501177.7

CRNDE-201, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 1 (best) BASIC

Gene CRNDE, Length 614 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-201ENST00000501177 PAXIP1Q6ZW49 1069 aaPredicted RBP12.49□□□□□ -0.41
CRNDE-201ENST00000501177 ZBED2Q9BTP6 218 aa12.49□□□□□ -0.41
CRNDE-201ENST00000501177 SCRIBQ14160 1630 aa12.48□□□□□ -0.41
CRNDE-201ENST00000501177 CFAP44Q96MT7 982 aa12.48□□□□□ -0.41
CRNDE-201ENST00000501177 SLC4A5Q9BY07 1137 aa12.47□□□□□ -0.41
CRNDE-201ENST00000501177 KCTD12Q96CX2 325 aaKnown RBP12.45□□□□□ -0.42
CRNDE-201ENST00000501177 BHMG1C9JSJ3 638 aaPredicted RBP12.44□□□□□ -0.42
CRNDE-201ENST00000501177 COL9A1P20849 921 aa12.44□□□□□ -0.42
CRNDE-201ENST00000501177 HCSTQ9UBK5 93 aa12.44□□□□□ -0.42
CRNDE-201ENST00000501177 PHF14O94880 888 aa12.43□□□□□ -0.42
CRNDE-201ENST00000501177 TYW1BQ6NUM6 668 aa12.42□□□□□ -0.42
CRNDE-201ENST00000501177 STAC3Q96MF2 364 aa12.4□□□□□ -0.42
CRNDE-201ENST00000501177 PROX2Q3B8N5 592 aa12.39□□□□□ -0.43
CRNDE-201ENST00000501177 FBXW7Q969H0 707 aa12.39□□□□□ -0.43
CRNDE-201ENST00000501177 PPP1R3GB7ZBB8 358 aa12.38□□□□□ -0.43
CRNDE-201ENST00000501177 DDX12PQ92771 950 aa12.38□□□□□ -0.43
CRNDE-201ENST00000501177 PDIA6Q15084 440 aa12.35□□□□□ -0.43
CRNDE-201ENST00000501177 RBM33Q96EV2 1170 aaKnown RBP12.34□□□□□ -0.43
CRNDE-201ENST00000501177 EPAS1Q99814 870 aa12.34□□□□□ -0.43
CRNDE-201ENST00000501177 PLA2G2EQ9NZK7 142 aa12.34□□□□□ -0.43
CRNDE-201ENST00000501177 E2F4Q16254 413 aa12.33□□□□□ -0.44
CRNDE-201ENST00000501177 C6orf132Q5T0Z8 1188 aa12.33□□□□□ -0.44
CRNDE-201ENST00000501177 MRPL50Q8N5N7 158 aaKnown RBP12.33□□□□□ -0.44
CRNDE-201ENST00000501177 PTPN5P54829 565 aa12.32□□□□□ -0.44
CRNDE-201ENST00000501177 THSD4Q6ZMP0 1018 aa12.31□□□□□ -0.44
CRNDE-201ENST00000501177 CUX2O14529 1486 aa12.31□□□□□ -0.44
CRNDE-201ENST00000501177 RABGEF1Q9UJ41 708 aa12.3□□□□□ -0.44
CRNDE-201ENST00000501177 PRIM1P49642 420 aaKnown RBP12.29□□□□□ -0.44
CRNDE-201ENST00000501177 WNT2BQ93097 391 aa12.29□□□□□ -0.44
CRNDE-201ENST00000501177 NBPF3Q9H094 633 aa12.29□□□□□ -0.44
CRNDE-201ENST00000501177 NBR1Q14596 966 aa12.28□□□□□ -0.44
CRNDE-201ENST00000501177 TSR1Q2NL82 804 aaKnown RBP12.28□□□□□ -0.44
CRNDE-201ENST00000501177 ARIH1Q9Y4X5 557 aaPredicted RBP12.28□□□□□ -0.44
CRNDE-201ENST00000501177 GOLGA8CPA6NN73 597 aa12.27□□□□□ -0.45
CRNDE-201ENST00000501177 WDR70Q9NW82 654 aa12.27□□□□□ -0.45
CRNDE-201ENST00000501177 KIAA1468Q9P260 1216 aa12.27□□□□□ -0.45
CRNDE-201ENST00000501177 SPDYE16A6NNV3 312 aaPredicted RBP12.26□□□□□ -0.45
CRNDE-201ENST00000501177 EN1Q05925 392 aaPredicted RBP12.26□□□□□ -0.45
CRNDE-201ENST00000501177 TSHZ2Q9NRE2 1034 aa12.26□□□□□ -0.45
CRNDE-201ENST00000501177 TRIM6-TRIM34B2RNG4 842 aa12.22□□□□□ -0.45
CRNDE-201ENST00000501177 MAP3K7O43318 606 aa12.22□□□□□ -0.45
CRNDE-201ENST00000501177 SEPT9Q9UHD8 586 aaPredicted RBP12.22□□□□□ -0.45
CRNDE-201ENST00000501177 GRXCR2A6NFK2 248 aa12.2□□□□□ -0.46
CRNDE-201ENST00000501177 ONECUT3O60422 494 aaPredicted RBP12.19□□□□□ -0.46
CRNDE-201ENST00000501177 BCAMP50895 628 aa12.19□□□□□ -0.46
CRNDE-201ENST00000501177 TSKSQ9UJT2 592 aa12.19□□□□□ -0.46
CRNDE-201ENST00000501177 LAPTM4BQ86VI4 370 aa12.18□□□□□ -0.46
CRNDE-201ENST00000501177 ERCC6Q03468 1493 aa12.17□□□□□ -0.46
CRNDE-201ENST00000501177 OSBPP22059 807 aa12.17□□□□□ -0.46
CRNDE-201ENST00000501177 ZFRQ96KR1 1074 aaKnown RBP12.17□□□□□ -0.46
CRNDE-201ENST00000501177 ANKK1Q8NFD2 765 aa12.16□□□□□ -0.46
CRNDE-201ENST00000501177 FAM198AQ9UFP1 575 aa12.16□□□□□ -0.46
CRNDE-201ENST00000501177 CDHR5Q9HBB8 845 aa12.15□□□□□ -0.46
CRNDE-201ENST00000501177 SOWAHBA6NEL2 793 aa12.13□□□□□ -0.47
CRNDE-201ENST00000501177 C3orf80F5H4A9 247 aa12.13□□□□□ -0.47
CRNDE-201ENST00000501177 FAM98CQ17RN3 349 aaKnown RBP12.11□□□□□ -0.47
CRNDE-201ENST00000501177 CDCA7LQ96GN5 454 aa12.11□□□□□ -0.47
CRNDE-201ENST00000501177 PRSS12P56730 875 aa12.1□□□□□ -0.47
CRNDE-201ENST00000501177 KCNV2Q8TDN2 545 aa12.1□□□□□ -0.47
CRNDE-201ENST00000501177 SMAPO00193 183 aa12.09□□□□□ -0.47
CRNDE-201ENST00000501177 WBP1LQ9NX94 342 aa12.09□□□□□ -0.47
CRNDE-201ENST00000501177 PACS2Q86VP3 889 aa12.08□□□□□ -0.48
CRNDE-201ENST00000501177 NCAPD3P42695 1498 aa12.08□□□□□ -0.48
CRNDE-201ENST00000501177 MLLT3P42568 568 aaPredicted RBP12.06□□□□□ -0.48
CRNDE-201ENST00000501177 IFFO2Q5TF58 517 aa12.06□□□□□ -0.48
CRNDE-201ENST00000501177 NPDC1Q9NQX5 325 aaPredicted RBP12.05□□□□□ -0.48
CRNDE-201ENST00000501177 CERKQ8TCT0 537 aa12.04□□□□□ -0.48
CRNDE-201ENST00000501177 ARHGEF1Q92888 912 aaKnown RBP12.04□□□□□ -0.48
CRNDE-201ENST00000501177 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.03□□□□□ -0.48
CRNDE-201ENST00000501177 HMGXB3Q12766 1538 aa12.02□□□□□ -0.48
CRNDE-201ENST00000501177 LRCH3Q96II8 777 aa12.02□□□□□ -0.49
CRNDE-201ENST00000501177 HPS5Q9UPZ3 1129 aa12.02□□□□□ -0.49
CRNDE-201ENST00000501177 TATDN2Q93075 761 aa12.01□□□□□ -0.49
CRNDE-201ENST00000501177 A0A0G2JS52 829 aa12□□□□□ -0.49
CRNDE-201ENST00000501177 ITGBL1O95965 494 aaPredicted RBP12□□□□□ -0.49
CRNDE-201ENST00000501177 SAMD7Q7Z3H4 446 aa12□□□□□ -0.49
CRNDE-201ENST00000501177 TSR3Q9UJK0 312 aaKnown RBP12□□□□□ -0.49
CRNDE-201ENST00000501177 PNMA3Q9UL41 463 aa12□□□□□ -0.49
CRNDE-201ENST00000501177 SMARCA2P51531 1590 aa12□□□□□ -0.49
CRNDE-201ENST00000501177 TTC13Q8NBP0 860 aa11.99□□□□□ -0.49
CRNDE-201ENST00000501177 PADI6Q6TGC4 694 aa11.98□□□□□ -0.49
CRNDE-201ENST00000501177 NUDT18Q6ZVK8 323 aa11.98□□□□□ -0.49
CRNDE-201ENST00000501177 THOC2Q8NI27 1593 aaKnown RBP11.97□□□□□ -0.49
CRNDE-201ENST00000501177 ATAD2BQ9ULI0 1458 aa11.97□□□□□ -0.49
CRNDE-201ENST00000501177 NBPF26B4DH59 902 aa11.97□□□□□ -0.49
CRNDE-201ENST00000501177 NYAP1Q6ZVC0 841 aa11.97□□□□□ -0.49
CRNDE-201ENST00000501177 RBM27Q9P2N5 1060 aaKnown RBP11.97□□□□□ -0.49
CRNDE-201ENST00000501177 PLCB2Q00722 1185 aa11.94□□□□□ -0.5
CRNDE-201ENST00000501177 PPP4CP60510 307 aa11.92□□□□□ -0.5
CRNDE-201ENST00000501177 SMARCA4P51532 1647 aa11.92□□□□□ -0.5
CRNDE-201ENST00000501177 LAMC3Q9Y6N6 1575 aa11.92□□□□□ -0.5
CRNDE-201ENST00000501177 NESP48681 1621 aa11.91□□□□□ -0.5
CRNDE-201ENST00000501177 SEMA3EO15041 775 aa11.9□□□□□ -0.5
CRNDE-201ENST00000501177 KCNC4Q03721 635 aa11.88□□□□□ -0.51
CRNDE-201ENST00000501177 PTGDRQ13258 359 aa11.88□□□□□ -0.51
CRNDE-201ENST00000501177 RGS20O76081 388 aa11.87□□□□□ -0.51
CRNDE-201ENST00000501177 EYA1Q99502 592 aa11.87□□□□□ -0.51
CRNDE-201ENST00000501177 BAZ1BQ9UIG0 1483 aaKnown RBP11.87□□□□□ -0.51
CRNDE-201ENST00000501177 SWT1Q5T5J6 900 aaKnown RBP11.86□□□□□ -0.51
CRNDE-201ENST00000501177 P3H3Q8IVL6 736 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms