RNA–Protein interactions for RNA: ENST00000498822.5

PCBP4-218, Transcript of poly(rC) binding protein 4, humanhuman

TSL 2

Gene PCBP4, Length 2,547 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-218ENST00000498822 TMC1Q8TDI8 760 aa21.68■■□□□ 1.06
PCBP4-218ENST00000498822 ARHGEF12Q9NZN5 1544 aa21.68■■□□□ 1.06
PCBP4-218ENST00000498822 SALL2Q9Y467 1007 aaPredicted RBP21.68■■□□□ 1.06
PCBP4-218ENST00000498822 ARHGEF5Q12774 1597 aa21.68■■□□□ 1.06
PCBP4-218ENST00000498822 ERCC6L2Q5T890 1561 aa21.68■■□□□ 1.06
PCBP4-218ENST00000498822 PNISRQ8TF01 805 aaKnown RBP21.67■■□□□ 1.06
PCBP4-218ENST00000498822 ARHGAP5Q13017 1502 aa21.65■■□□□ 1.06
PCBP4-218ENST00000498822 SMG6Q86US8 1419 aaKnown RBP21.64■■□□□ 1.05
PCBP4-218ENST00000498822 NUDCQ9Y266 331 aa21.63■■□□□ 1.05
PCBP4-218ENST00000498822 CCDC144AA2RUR9 1427 aa21.61■■□□□ 1.05
PCBP4-218ENST00000498822 PLA2R1Q13018 1463 aa21.61■■□□□ 1.05
PCBP4-218ENST00000498822 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.61■■□□□ 1.05
PCBP4-218ENST00000498822 ERICH6BQ5W0A0 696 aa21.6■■□□□ 1.05
PCBP4-218ENST00000498822 TRPM1Q7Z4N2 1603 aa21.6■■□□□ 1.05
PCBP4-218ENST00000498822 E9PCH4 1651 aa21.6■■□□□ 1.05
PCBP4-218ENST00000498822 PRAG1Q86YV5 1406 aa21.59■■□□□ 1.05
PCBP4-218ENST00000498822 PLEKHH2Q8IVE3 1493 aa21.59■■□□□ 1.05
PCBP4-218ENST00000498822 ARID4BQ4LE39 1312 aaPredicted RBP21.59■■□□□ 1.05
PCBP4-218ENST00000498822 A2MP01023 1474 aa21.57■■□□□ 1.04
PCBP4-218ENST00000498822 MYO5CQ9NQX4 1742 aa21.56■■□□□ 1.04
PCBP4-218ENST00000498822 MYBBP1AQ9BQG0 1328 aaKnown RBP21.55■■□□□ 1.04
PCBP4-218ENST00000498822 FANCIQ9NVI1 1328 aa21.54■■□□□ 1.04
PCBP4-218ENST00000498822 DISP3Q9P2K9 1392 aa21.54■■□□□ 1.04
PCBP4-218ENST00000498822 CC2D1BQ5T0F9 858 aaKnown RBP21.54■■□□□ 1.04
PCBP4-218ENST00000498822 UNC13BO14795 1591 aa21.52■■□□□ 1.04
PCBP4-218ENST00000498822 LRPPRCP42704 1394 aaKnown RBP21.52■■□□□ 1.03
PCBP4-218ENST00000498822 CCDC136Q96JN2 1154 aa21.5■■□□□ 1.03
PCBP4-218ENST00000498822 BRD4O60885 1362 aaPredicted RBP21.48■■□□□ 1.03
PCBP4-218ENST00000498822 RNF123Q5XPI4 1314 aa21.48■■□□□ 1.03
PCBP4-218ENST00000498822 RALBP1Q15311 655 aa21.47■■□□□ 1.03
PCBP4-218ENST00000498822 TESK2Q96S53 571 aa21.47■■□□□ 1.03
PCBP4-218ENST00000498822 PER1O15534 1290 aaPredicted RBP21.46■■□□□ 1.03
PCBP4-218ENST00000498822 SHROOM2Q13796 1616 aa21.46■■□□□ 1.03
PCBP4-218ENST00000498822 IQGAP3Q86VI3 1631 aa21.46■■□□□ 1.03
PCBP4-218ENST00000498822 KTN1Q86UP2 1357 aaKnown RBP21.45■■□□□ 1.03
PCBP4-218ENST00000498822 ABCC2Q92887 1545 aa21.45■■□□□ 1.02
PCBP4-218ENST00000498822 CDCA7LQ96GN5 454 aa21.45■■□□□ 1.02
PCBP4-218ENST00000498822 RSPH4AQ5TD94 716 aa21.45■■□□□ 1.02
PCBP4-218ENST00000498822 PARD3Q8TEW0 1356 aa21.44■■□□□ 1.02
PCBP4-218ENST00000498822 MAST1Q9Y2H9 1570 aa21.44■■□□□ 1.02
PCBP4-218ENST00000498822 ERICH6Q7L0X2 663 aa21.44■■□□□ 1.02
PCBP4-218ENST00000498822 PANK3Q9H999 370 aa21.44■■□□□ 1.02
PCBP4-218ENST00000498822 COL17A1Q9UMD9 1497 aaPredicted RBP21.43■■□□□ 1.02
PCBP4-218ENST00000498822 PLXNC1O60486 1568 aa21.43■■□□□ 1.02
PCBP4-218ENST00000498822 PRDM15P57071 1507 aaPredicted RBP21.42■■□□□ 1.02
PCBP4-218ENST00000498822 NLRP13Q86W25 1043 aa21.42■■□□□ 1.02
PCBP4-218ENST00000498822 TRAPPC8Q9Y2L5 1435 aa21.42■■□□□ 1.02
PCBP4-218ENST00000498822 EXOC6Q8TAG9 804 aa21.4■■□□□ 1.02
PCBP4-218ENST00000498822 ZCCHC11Q5TAX3 1644 aaKnown RBP21.4■■□□□ 1.02
PCBP4-218ENST00000498822 GPRASP1Q5JY77 1395 aa21.4■■□□□ 1.02
PCBP4-218ENST00000498822 ERBINQ96RT1 1412 aa21.39■■□□□ 1.02
PCBP4-218ENST00000498822 AFAP1Q8N556 730 aa21.39■■□□□ 1.01
PCBP4-218ENST00000498822 DUOX2Q9NRD8 1548 aa21.38■■□□□ 1.01
PCBP4-218ENST00000498822 RRP1P56182 461 aaKnown RBP21.37■■□□□ 1.01
PCBP4-218ENST00000498822 PLIN1O60240 522 aa21.36■■□□□ 1.01
PCBP4-218ENST00000498822 RCAN3Q9UKA8 241 aa21.35■■□□□ 1.01
PCBP4-218ENST00000498822 PAK3O75914 559 aaPredicted RBP21.34■■□□□ 1.01
PCBP4-218ENST00000498822 PLCH2O75038 1416 aa21.34■■□□□ 1.01
PCBP4-218ENST00000498822 MAGI2Q86UL8 1455 aa21.34■■□□□ 1.01
PCBP4-218ENST00000498822 ABCC1P33527 1531 aa21.33■■□□□ 1
PCBP4-218ENST00000498822 SKAP1Q86WV1 359 aa21.32■■□□□ 1
PCBP4-218ENST00000498822 TMF1P82094 1093 aa21.31■■□□□ 1
PCBP4-218ENST00000498822 EFCAB2Q5VUJ9 269 aa21.31■■□□□ 1
PCBP4-218ENST00000498822 EIF2AK4Q9P2K8 1649 aaKnown RBP21.31■■□□□ 1
PCBP4-218ENST00000498822 LAMC1P11047 1609 aa21.3■■□□□ 1
PCBP4-218ENST00000498822 RNF17Q9BXT8 1623 aaKnown RBP21.3■■□□□ 1
PCBP4-218ENST00000498822 SPAG9O60271 1321 aaKnown RBP21.28■■□□□ 1
PCBP4-218ENST00000498822 MADDQ8WXG6 1647 aa21.28■■□□□ 1
PCBP4-218ENST00000498822 ATP10AO60312 1499 aa21.27■□□□□ 0.99
PCBP4-218ENST00000498822 MYT1LQ9UL68 1186 aa21.26■□□□□ 0.99
PCBP4-218ENST00000498822 ADAMTS8Q9UP79 889 aa21.25■□□□□ 0.99
PCBP4-218ENST00000498822 WDR7Q9Y4E6 1490 aa21.25■□□□□ 0.99
PCBP4-218ENST00000498822 CLTCL1P53675 1640 aa21.25■□□□□ 0.99
PCBP4-218ENST00000498822 NBR1Q14596 966 aa21.24■□□□□ 0.99
PCBP4-218ENST00000498822 ZFYVE16Q7Z3T8 1539 aa21.24■□□□□ 0.99
PCBP4-218ENST00000498822 UGGT1Q9NYU2 1555 aa21.23■□□□□ 0.99
PCBP4-218ENST00000498822 BLMP54132 1417 aaPredicted RBP21.23■□□□□ 0.99
PCBP4-218ENST00000498822 NOP58Q9Y2X3 529 aaKnown RBP21.23■□□□□ 0.99
PCBP4-218ENST00000498822 IQGAP1P46940 1657 aa21.22■□□□□ 0.99
PCBP4-218ENST00000498822 NPM2Q86SE8 214 aaKnown RBP21.22■□□□□ 0.99
PCBP4-218ENST00000498822 SPHKAPQ2M3C7 1700 aa21.22■□□□□ 0.99
PCBP4-218ENST00000498822 C20orf194Q5TEA3 1177 aa21.21■□□□□ 0.99
PCBP4-218ENST00000498822 CLASP1Q7Z460 1538 aa21.2■□□□□ 0.98
PCBP4-218ENST00000498822 CEP152O94986 1710 aa21.2■□□□□ 0.98
PCBP4-218ENST00000498822 BCL11AQ9H165 835 aa21.19■□□□□ 0.98
PCBP4-218ENST00000498822 KNSTRNQ9Y448 316 aa21.19■□□□□ 0.98
PCBP4-218ENST00000498822 TRPM2O94759 1503 aa21.18■□□□□ 0.98
PCBP4-218ENST00000498822 KIF3BO15066 747 aa21.18■□□□□ 0.98
PCBP4-218ENST00000498822 PPP2R1AP30153 589 aa21.18■□□□□ 0.98
PCBP4-218ENST00000498822 CRBNQ96SW2 442 aa21.18■□□□□ 0.98
PCBP4-218ENST00000498822 PLEKHH1Q9ULM0 1364 aa21.17■□□□□ 0.98
PCBP4-218ENST00000498822 PDE3BQ13370 1112 aa21.16■□□□□ 0.98
PCBP4-218ENST00000498822 AMER1Q5JTC6 1135 aaPredicted RBP21.16■□□□□ 0.98
PCBP4-218ENST00000498822 CCDC146Q8IYE0 955 aa21.16■□□□□ 0.98
PCBP4-218ENST00000498822 WASHC2CQ9Y4E1 1318 aa21.16■□□□□ 0.98
PCBP4-218ENST00000498822 MYOM1P52179 1685 aa21.15■□□□□ 0.98
PCBP4-218ENST00000498822 SCAPERQ9BY12 1400 aa21.14■□□□□ 0.98
PCBP4-218ENST00000498822 ZMYM4Q5VZL5 1548 aa21.14■□□□□ 0.98
PCBP4-218ENST00000498822 ANP32AP39687 249 aaKnown RBP21.14■□□□□ 0.98
PCBP4-218ENST00000498822 CFAP70Q5T0N1 1121 aa21.14■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms