RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 YEATS2Q9ULM3 1422 aa9.82□□□□□ -0.84
SPTA1-209ENST00000498708 SIGLEC1Q9BZZ2 1709 aa9.81□□□□□ -0.84
SPTA1-209ENST00000498708 UGGT2Q9NYU1 1516 aa9.81□□□□□ -0.84
SPTA1-209ENST00000498708 LTBP4Q8N2S1 1624 aa9.79□□□□□ -0.84
SPTA1-209ENST00000498708 MLECQ14165 292 aa9.79□□□□□ -0.84
SPTA1-209ENST00000498708 PHLDB1Q86UU1 1377 aa9.78□□□□□ -0.84
SPTA1-209ENST00000498708 IRX5P78411 483 aaPredicted RBP9.78□□□□□ -0.84
SPTA1-209ENST00000498708 OCEL1Q9H607 264 aa9.78□□□□□ -0.84
SPTA1-209ENST00000498708 ABCA8O94911 1581 aa9.78□□□□□ -0.84
SPTA1-209ENST00000498708 PREX1Q8TCU6 1659 aa9.77□□□□□ -0.84
SPTA1-209ENST00000498708 ARID3CA6NKF2 412 aa9.77□□□□□ -0.85
SPTA1-209ENST00000498708 CEBPAP49715 358 aaPredicted RBP9.77□□□□□ -0.85
SPTA1-209ENST00000498708 GOLGA2Q08379 1002 aa9.77□□□□□ -0.85
SPTA1-209ENST00000498708 FER1L4A9Z1Z3 1794 aa9.76□□□□□ -0.85
SPTA1-209ENST00000498708 ARHGEF40Q8TER5 1519 aa9.76□□□□□ -0.85
SPTA1-209ENST00000498708 ABCA9Q8IUA7 1624 aa9.75□□□□□ -0.85
SPTA1-209ENST00000498708 NEO1Q92859 1461 aa9.75□□□□□ -0.85
SPTA1-209ENST00000498708 PSEN1P49768 467 aa9.75□□□□□ -0.85
SPTA1-209ENST00000498708 PDAP1Q13442 181 aaKnown RBP9.75□□□□□ -0.85
SPTA1-209ENST00000498708 TTC37Q6PGP7 1564 aa9.75□□□□□ -0.85
SPTA1-209ENST00000498708 PTPRTO14522 1441 aa9.73□□□□□ -0.85
SPTA1-209ENST00000498708 RICTORQ6R327 1708 aa9.73□□□□□ -0.85
SPTA1-209ENST00000498708 FANCAO15360 1455 aa9.73□□□□□ -0.85
SPTA1-209ENST00000498708 MKRN3Q13064 507 aaKnown RBP9.73□□□□□ -0.85
SPTA1-209ENST00000498708 POGZQ7Z3K3 1410 aa9.73□□□□□ -0.85
SPTA1-209ENST00000498708 IQSEC2Q5JU85 1478 aa9.72□□□□□ -0.85
SPTA1-209ENST00000498708 MED1Q15648 1581 aaPredicted RBP9.72□□□□□ -0.85
SPTA1-209ENST00000498708 UBAP1LF5GYI3 381 aa9.72□□□□□ -0.85
SPTA1-209ENST00000498708 ATP10BO94823 1461 aa9.72□□□□□ -0.85
SPTA1-209ENST00000498708 AKNAQ7Z591 1439 aa9.7□□□□□ -0.86
SPTA1-209ENST00000498708 DENND4BO75064 1496 aaPredicted RBP9.7□□□□□ -0.86
SPTA1-209ENST00000498708 SETD1BQ9UPS6 1966 aaKnown RBP9.68□□□□□ -0.86
SPTA1-209ENST00000498708 ARHGEF12Q9NZN5 1544 aa9.68□□□□□ -0.86
SPTA1-209ENST00000498708 FHOD3Q2V2M9 1422 aa9.68□□□□□ -0.86
SPTA1-209ENST00000498708 UHRF1BP1Q6BDS2 1440 aa9.68□□□□□ -0.86
SPTA1-209ENST00000498708 HSPA1LP34931 641 aa9.68□□□□□ -0.86
SPTA1-209ENST00000498708 POTEMA6NI47 508 aa9.67□□□□□ -0.86
SPTA1-209ENST00000498708 SLAIN1Q8ND83 568 aa9.67□□□□□ -0.86
SPTA1-209ENST00000498708 FAM163AQ96GL9 167 aaPredicted RBP9.67□□□□□ -0.86
SPTA1-209ENST00000498708 ZFYVE16Q7Z3T8 1539 aa9.66□□□□□ -0.86
SPTA1-209ENST00000498708 POTEGQ6S5H5 508 aa9.66□□□□□ -0.86
SPTA1-209ENST00000498708 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.66□□□□□ -0.86
SPTA1-209ENST00000498708 RAPGEF2Q9Y4G8 1499 aa9.66□□□□□ -0.86
SPTA1-209ENST00000498708 L3MBTL3Q96JM7 780 aaPredicted RBP9.65□□□□□ -0.86
SPTA1-209ENST00000498708 ZMYM4Q5VZL5 1548 aa9.65□□□□□ -0.86
SPTA1-209ENST00000498708 ZNF335Q9H4Z2 1342 aaPredicted RBP9.64□□□□□ -0.87
SPTA1-209ENST00000498708 PDCD7Q8N8D1 485 aaKnown RBP9.64□□□□□ -0.87
SPTA1-209ENST00000498708 EFCAB5A4FU69 1503 aa9.64□□□□□ -0.87
SPTA1-209ENST00000498708 HECW1Q76N89 1606 aa9.64□□□□□ -0.87
SPTA1-209ENST00000498708 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.63□□□□□ -0.87
SPTA1-209ENST00000498708 GOLGA3Q08378 1498 aa9.63□□□□□ -0.87
SPTA1-209ENST00000498708 CTTNBP2Q8WZ74 1663 aa9.62□□□□□ -0.87
SPTA1-209ENST00000498708 PIP4K2BP78356 416 aa9.62□□□□□ -0.87
SPTA1-209ENST00000498708 P3H3Q8IVL6 736 aa9.62□□□□□ -0.87
SPTA1-209ENST00000498708 CABP2Q9NPB3 220 aa9.62□□□□□ -0.87
SPTA1-209ENST00000498708 NCOA1Q15788 1441 aa9.62□□□□□ -0.87
SPTA1-209ENST00000498708 MAGI2Q86UL8 1455 aa9.61□□□□□ -0.87
SPTA1-209ENST00000498708 PCDH10Q9P2E7 1040 aa9.61□□□□□ -0.87
SPTA1-209ENST00000498708 C3P01024 1663 aa9.61□□□□□ -0.87
SPTA1-209ENST00000498708 NCKAP5LQ9HCH0 1330 aa9.6□□□□□ -0.87
SPTA1-209ENST00000498708 C3orf67Q6ZVT6 689 aa9.6□□□□□ -0.87
SPTA1-209ENST00000498708 ATP10AO60312 1499 aa9.59□□□□□ -0.87
SPTA1-209ENST00000498708 RIOK3O14730 519 aaKnown RBP9.59□□□□□ -0.87
SPTA1-209ENST00000498708 SNPHO15079 494 aa9.58□□□□□ -0.88
SPTA1-209ENST00000498708 RGS17Q9UGC6 210 aaPredicted RBP9.58□□□□□ -0.88
SPTA1-209ENST00000498708 C9orf84Q5VXU9 1444 aa9.57□□□□□ -0.88
SPTA1-209ENST00000498708 CAMSAP1Q5T5Y3 1602 aa9.57□□□□□ -0.88
SPTA1-209ENST00000498708 LCE2DQ5TA82 110 aaPredicted RBP9.57□□□□□ -0.88
SPTA1-209ENST00000498708 CFAP74Q9C0B2 1584 aa9.57□□□□□ -0.88
SPTA1-209ENST00000498708 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.56□□□□□ -0.88
SPTA1-209ENST00000498708 SCAPERQ9BY12 1400 aa9.56□□□□□ -0.88
SPTA1-209ENST00000498708 TRAPPC8Q9Y2L5 1435 aa9.56□□□□□ -0.88
SPTA1-209ENST00000498708 G3V3G9 751 aa9.55□□□□□ -0.88
SPTA1-209ENST00000498708 TAOK2Q9UL54 1235 aa9.55□□□□□ -0.88
SPTA1-209ENST00000498708 RAPGEF6Q8TEU7 1601 aa9.54□□□□□ -0.88
SPTA1-209ENST00000498708 VGFO15240 615 aaPredicted RBP9.54□□□□□ -0.88
SPTA1-209ENST00000498708 FAM9AQ8IZU1 332 aaPredicted RBP9.53□□□□□ -0.88
SPTA1-209ENST00000498708 PLEKHD1A6NEE1 506 aa9.52□□□□□ -0.89
SPTA1-209ENST00000498708 TOM1O60784 492 aa9.52□□□□□ -0.89
SPTA1-209ENST00000498708 PLSCR2Q9NRY7 297 aa9.52□□□□□ -0.89
SPTA1-209ENST00000498708 NUP153P49790 1475 aaKnown RBP9.52□□□□□ -0.89
SPTA1-209ENST00000498708 RNF25Q96BH1 459 aaPredicted RBP9.51□□□□□ -0.89
SPTA1-209ENST00000498708 ST18O60284 1047 aa9.5□□□□□ -0.89
SPTA1-209ENST00000498708 EFCAB3Q8N7B9 438 aa9.5□□□□□ -0.89
SPTA1-209ENST00000498708 TMEM121BQ9BXQ6 578 aaPredicted RBP9.5□□□□□ -0.89
SPTA1-209ENST00000498708 BOLA1Q9Y3E2 137 aa9.5□□□□□ -0.89
SPTA1-209ENST00000498708 ALKQ9UM73 1620 aa9.49□□□□□ -0.89
SPTA1-209ENST00000498708 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.49□□□□□ -0.89
SPTA1-209ENST00000498708 DPY19L2Q6NUT2 758 aa9.49□□□□□ -0.89
SPTA1-209ENST00000498708 AFAP1Q8N556 730 aa9.49□□□□□ -0.89
SPTA1-209ENST00000498708 ZFP91Q96JP5 570 aaPredicted RBP9.49□□□□□ -0.89
SPTA1-209ENST00000498708 SRCAPQ6ZRS2 3230 aa9.48□□□□□ -0.89
SPTA1-209ENST00000498708 SOX12O15370 315 aa9.48□□□□□ -0.89
SPTA1-209ENST00000498708 PKD2Q13563 968 aa9.48□□□□□ -0.89
SPTA1-209ENST00000498708 POTEAQ6S8J7 498 aa9.48□□□□□ -0.89
SPTA1-209ENST00000498708 ESF1Q9H501 851 aaKnown RBP9.48□□□□□ -0.89
SPTA1-209ENST00000498708 DIP2CQ9Y2E4 1556 aa9.47□□□□□ -0.89
SPTA1-209ENST00000498708 PLCH2O75038 1416 aa9.47□□□□□ -0.89
SPTA1-209ENST00000498708 TCOF1Q13428 1488 aaKnown RBP9.47□□□□□ -0.89
SPTA1-209ENST00000498708 SUPT6HQ7KZ85 1726 aaKnown RBP9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms