RNA–Protein interactions for RNA: ENST00000498517.5

ARHGEF3-215, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene ARHGEF3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-215ENST00000498517 EVI5O60447 810 aa9.27□□□□□ -0.93
ARHGEF3-215ENST00000498517 KCTD12Q96CX2 325 aaKnown RBP9.27□□□□□ -0.93
ARHGEF3-215ENST00000498517 PLA2G2EQ9NZK7 142 aa9.27□□□□□ -0.93
ARHGEF3-215ENST00000498517 HCSTQ9UBK5 93 aa9.27□□□□□ -0.93
ARHGEF3-215ENST00000498517 ADAM33Q9BZ11 813 aa9.26□□□□□ -0.93
ARHGEF3-215ENST00000498517 JPH4Q96JJ6 628 aa9.24□□□□□ -0.93
ARHGEF3-215ENST00000498517 BHMG1C9JSJ3 638 aaPredicted RBP9.23□□□□□ -0.93
ARHGEF3-215ENST00000498517 ZBED2Q9BTP6 218 aa9.23□□□□□ -0.93
ARHGEF3-215ENST00000498517 SLC4A5Q9BY07 1137 aa9.21□□□□□ -0.94
ARHGEF3-215ENST00000498517 PTPREP23469 700 aa9.2□□□□□ -0.94
ARHGEF3-215ENST00000498517 ZDHHC16Q969W1 377 aa9.2□□□□□ -0.94
ARHGEF3-215ENST00000498517 PCDHGA10Q9Y5H3 936 aa9.2□□□□□ -0.94
ARHGEF3-215ENST00000498517 MAP3K9P80192 1104 aa9.19□□□□□ -0.94
ARHGEF3-215ENST00000498517 KCNH8Q96L42 1107 aa9.18□□□□□ -0.94
ARHGEF3-215ENST00000498517 COL9A1P20849 921 aa9.17□□□□□ -0.94
ARHGEF3-215ENST00000498517 PTPN5P54829 565 aa9.17□□□□□ -0.94
ARHGEF3-215ENST00000498517 CADPSQ9ULU8 1353 aa9.16□□□□□ -0.94
ARHGEF3-215ENST00000498517 PROX2Q3B8N5 592 aa9.16□□□□□ -0.94
ARHGEF3-215ENST00000498517 CAMK2BQ13554 666 aa9.15□□□□□ -0.94
ARHGEF3-215ENST00000498517 THSD4Q6ZMP0 1018 aa9.15□□□□□ -0.94
ARHGEF3-215ENST00000498517 STAC3Q96MF2 364 aa9.14□□□□□ -0.95
ARHGEF3-215ENST00000498517 DPYSL4O14531 572 aa9.13□□□□□ -0.95
ARHGEF3-215ENST00000498517 CFTRP13569 1480 aa9.13□□□□□ -0.95
ARHGEF3-215ENST00000498517 PPP1R3GB7ZBB8 358 aa9.11□□□□□ -0.95
ARHGEF3-215ENST00000498517 WNT2BQ93097 391 aa9.11□□□□□ -0.95
ARHGEF3-215ENST00000498517 MRPL50Q8N5N7 158 aaKnown RBP9.1□□□□□ -0.95
ARHGEF3-215ENST00000498517 LAMC3Q9Y6N6 1575 aa9.1□□□□□ -0.95
ARHGEF3-215ENST00000498517 PDS5BQ9NTI5 1447 aa9.09□□□□□ -0.95
ARHGEF3-215ENST00000498517 PHF14O94880 888 aa9.09□□□□□ -0.95
ARHGEF3-215ENST00000498517 TYW1BQ6NUM6 668 aa9.09□□□□□ -0.95
ARHGEF3-215ENST00000498517 PRDM2Q13029 1718 aa9.08□□□□□ -0.96
ARHGEF3-215ENST00000498517 NESP48681 1621 aa9.07□□□□□ -0.96
ARHGEF3-215ENST00000498517 BBXQ8WY36 941 aaPredicted RBP9.06□□□□□ -0.96
ARHGEF3-215ENST00000498517 RABGEF1Q9UJ41 708 aa9.06□□□□□ -0.96
ARHGEF3-215ENST00000498517 C6orf132Q5T0Z8 1188 aa9.05□□□□□ -0.96
ARHGEF3-215ENST00000498517 DDX12PQ92771 950 aa9.05□□□□□ -0.96
ARHGEF3-215ENST00000498517 FBXW7Q969H0 707 aa9.05□□□□□ -0.96
ARHGEF3-215ENST00000498517 NBPF3Q9H094 633 aa9.05□□□□□ -0.96
ARHGEF3-215ENST00000498517 FANCD2Q9BXW9 1451 aa9.04□□□□□ -0.96
ARHGEF3-215ENST00000498517 GOLGA8CPA6NN73 597 aa9.04□□□□□ -0.96
ARHGEF3-215ENST00000498517 BCAMP50895 628 aa9.04□□□□□ -0.96
ARHGEF3-215ENST00000498517 RBM33Q96EV2 1170 aaKnown RBP9.04□□□□□ -0.96
ARHGEF3-215ENST00000498517 CUX2O14529 1486 aa9.03□□□□□ -0.96
ARHGEF3-215ENST00000498517 PRIM1P49642 420 aaKnown RBP9.03□□□□□ -0.96
ARHGEF3-215ENST00000498517 KIAA1468Q9P260 1216 aa9.03□□□□□ -0.96
ARHGEF3-215ENST00000498517 WRNQ14191 1432 aaPredicted RBP eCLIP9.03□□□□□ -0.96
ARHGEF3-215ENST00000498517 TSR1Q2NL82 804 aaKnown RBP9.02□□□□□ -0.97
ARHGEF3-215ENST00000498517 SEPT9Q9UHD8 586 aaPredicted RBP9.02□□□□□ -0.97
ARHGEF3-215ENST00000498517 ABCC8Q09428 1581 aa9.02□□□□□ -0.97
ARHGEF3-215ENST00000498517 ERCC6Q03468 1493 aa9.01□□□□□ -0.97
ARHGEF3-215ENST00000498517 CEP164Q9UPV0 1460 aa9.01□□□□□ -0.97
ARHGEF3-215ENST00000498517 IFFO2Q5TF58 517 aa9□□□□□ -0.97
ARHGEF3-215ENST00000498517 EPAS1Q99814 870 aa9□□□□□ -0.97
ARHGEF3-215ENST00000498517 PDIA6Q15084 440 aa8.99□□□□□ -0.97
ARHGEF3-215ENST00000498517 A0A0G2JS52 829 aa8.98□□□□□ -0.97
ARHGEF3-215ENST00000498517 TRIM6-TRIM34B2RNG4 842 aa8.98□□□□□ -0.97
ARHGEF3-215ENST00000498517 ZFRQ96KR1 1074 aaKnown RBP8.98□□□□□ -0.97
ARHGEF3-215ENST00000498517 SOWAHBA6NEL2 793 aa8.97□□□□□ -0.97
ARHGEF3-215ENST00000498517 NBR1Q14596 966 aa8.97□□□□□ -0.97
ARHGEF3-215ENST00000498517 ANKK1Q8NFD2 765 aa8.97□□□□□ -0.97
ARHGEF3-215ENST00000498517 RTN4Q9NQC3 1192 aaKnown RBP8.97□□□□□ -0.97
ARHGEF3-215ENST00000498517 KIF21AQ7Z4S6 1674 aa8.97□□□□□ -0.97
ARHGEF3-215ENST00000498517 C3orf80F5H4A9 247 aa8.96□□□□□ -0.98
ARHGEF3-215ENST00000498517 EN1Q05925 392 aaPredicted RBP8.96□□□□□ -0.98
ARHGEF3-215ENST00000498517 LAPTM4BQ86VI4 370 aa8.96□□□□□ -0.98
ARHGEF3-215ENST00000498517 WBP1LQ9NX94 342 aa8.96□□□□□ -0.98
ARHGEF3-215ENST00000498517 TSKSQ9UJT2 592 aa8.96□□□□□ -0.98
ARHGEF3-215ENST00000498517 SPRYD3Q8NCJ5 442 aa8.95□□□□□ -0.98
ARHGEF3-215ENST00000498517 FAM198AQ9UFP1 575 aa8.95□□□□□ -0.98
ARHGEF3-215ENST00000498517 ONECUT3O60422 494 aaPredicted RBP8.94□□□□□ -0.98
ARHGEF3-215ENST00000498517 FAM9AQ8IZU1 332 aaPredicted RBP8.94□□□□□ -0.98
ARHGEF3-215ENST00000498517 TOP2BQ02880 1626 aa8.94□□□□□ -0.98
ARHGEF3-215ENST00000498517 ITGBL1O95965 494 aaPredicted RBP8.93□□□□□ -0.98
ARHGEF3-215ENST00000498517 SYNJ1O43426 1573 aa8.93□□□□□ -0.98
ARHGEF3-215ENST00000498517 BIVM-ERCC5R4GMW8 1640 aa8.92□□□□□ -0.98
ARHGEF3-215ENST00000498517 CUX1P39880 1505 aa8.92□□□□□ -0.98
ARHGEF3-215ENST00000498517 MRC2Q9UBG0 1479 aa8.92□□□□□ -0.98
ARHGEF3-215ENST00000498517 MAP3K7O43318 606 aa8.92□□□□□ -0.98
ARHGEF3-215ENST00000498517 DNMBPQ6XZF7 1577 aa8.91□□□□□ -0.98
ARHGEF3-215ENST00000498517 SMAPO00193 183 aa8.91□□□□□ -0.98
ARHGEF3-215ENST00000498517 FAM98CQ17RN3 349 aaKnown RBP8.91□□□□□ -0.98
ARHGEF3-215ENST00000498517 PAXIP1Q6ZW49 1069 aaPredicted RBP8.91□□□□□ -0.98
ARHGEF3-215ENST00000498517 TOPBP1Q92547 1522 aa8.9□□□□□ -0.98
ARHGEF3-215ENST00000498517 E2F4Q16254 413 aa8.9□□□□□ -0.98
ARHGEF3-215ENST00000498517 CFAP44Q96MT7 982 aa8.9□□□□□ -0.98
ARHGEF3-215ENST00000498517 CDHR5Q9HBB8 845 aa8.9□□□□□ -0.98
ARHGEF3-215ENST00000498517 URB2Q14146 1524 aaKnown RBP8.89□□□□□ -0.99
ARHGEF3-215ENST00000498517 SOGA1O94964 1423 aa8.88□□□□□ -0.99
ARHGEF3-215ENST00000498517 GRXCR2A6NFK2 248 aa8.88□□□□□ -0.99
ARHGEF3-215ENST00000498517 ARIH1Q9Y4X5 557 aaPredicted RBP8.88□□□□□ -0.99
ARHGEF3-215ENST00000498517 FGD5Q6ZNL6 1462 aa8.88□□□□□ -0.99
ARHGEF3-215ENST00000498517 SPDYE16A6NNV3 312 aaPredicted RBP8.87□□□□□ -0.99
ARHGEF3-215ENST00000498517 RGS20O76081 388 aa8.87□□□□□ -0.99
ARHGEF3-215ENST00000498517 OSBPP22059 807 aa8.87□□□□□ -0.99
ARHGEF3-215ENST00000498517 AMER1Q5JTC6 1135 aaPredicted RBP8.87□□□□□ -0.99
ARHGEF3-215ENST00000498517 CDCA7LQ96GN5 454 aa8.87□□□□□ -0.99
ARHGEF3-215ENST00000498517 HPS5Q9UPZ3 1129 aa8.87□□□□□ -0.99
ARHGEF3-215ENST00000498517 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.86□□□□□ -0.99
ARHGEF3-215ENST00000498517 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.86□□□□□ -0.99
ARHGEF3-215ENST00000498517 EEA1Q15075 1411 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms