RNA–Protein interactions for RNA: ENST00000497947.6

LMO7-213, Transcript of LIM domain 7, humanhuman

TSL 5

Gene LMO7, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-213ENST00000497947 FMN1Q68DA7 1419 aa12.62□□□□□ -0.39
LMO7-213ENST00000497947 CDK11AQ9UQ88 783 aaPredicted RBP12.61□□□□□ -0.39
LMO7-213ENST00000497947 ANP32CO43423 234 aa12.6□□□□□ -0.39
LMO7-213ENST00000497947 PPP1R15AO75807 674 aaPredicted RBP12.6□□□□□ -0.39
LMO7-213ENST00000497947 ITGAEP38570 1179 aa12.6□□□□□ -0.39
LMO7-213ENST00000497947 ESF1Q9H501 851 aaKnown RBP12.6□□□□□ -0.39
LMO7-213ENST00000497947 AFAP1Q8N556 730 aa12.59□□□□□ -0.39
LMO7-213ENST00000497947 LTBP4Q8N2S1 1624 aa12.59□□□□□ -0.39
LMO7-213ENST00000497947 FAM50AQ14320 339 aaKnown RBP12.58□□□□□ -0.4
LMO7-213ENST00000497947 ANP32EQ9BTT0 268 aa12.58□□□□□ -0.4
LMO7-213ENST00000497947 TRAPPC8Q9Y2L5 1435 aa12.58□□□□□ -0.4
LMO7-213ENST00000497947 ZNF518AQ6AHZ1 1483 aa12.58□□□□□ -0.4
LMO7-213ENST00000497947 MYT1LQ9UL68 1186 aa12.57□□□□□ -0.4
LMO7-213ENST00000497947 TONSLQ96HA7 1378 aa12.56□□□□□ -0.4
LMO7-213ENST00000497947 HFM1A2PYH4 1435 aa12.55□□□□□ -0.4
LMO7-213ENST00000497947 NCOA1Q15788 1441 aa12.54□□□□□ -0.4
LMO7-213ENST00000497947 FGD6Q6ZV73 1430 aa12.54□□□□□ -0.4
LMO7-213ENST00000497947 UBAP1LF5GYI3 381 aa12.54□□□□□ -0.4
LMO7-213ENST00000497947 DDX10Q13206 875 aaKnown RBP12.54□□□□□ -0.4
LMO7-213ENST00000497947 CDK13Q14004 1512 aaKnown RBP12.52□□□□□ -0.4
LMO7-213ENST00000497947 ERICH6BQ5W0A0 696 aa12.52□□□□□ -0.41
LMO7-213ENST00000497947 CNTLNQ9NXG0 1405 aa12.52□□□□□ -0.41
LMO7-213ENST00000497947 CCDC18Q5T9S5 1454 aa12.52□□□□□ -0.41
LMO7-213ENST00000497947 MLH3Q9UHC1 1453 aa12.52□□□□□ -0.41
LMO7-213ENST00000497947 KDM5CP41229 1560 aa12.52□□□□□ -0.41
LMO7-213ENST00000497947 REREQ9P2R6 1566 aa12.52□□□□□ -0.41
LMO7-213ENST00000497947 ATP1B4Q9UN42 357 aaPredicted RBP12.51□□□□□ -0.41
LMO7-213ENST00000497947 AGLP35573 1532 aa12.51□□□□□ -0.41
LMO7-213ENST00000497947 FKBP8Q14318 412 aa12.5□□□□□ -0.41
LMO7-213ENST00000497947 MYO5CQ9NQX4 1742 aa12.49□□□□□ -0.41
LMO7-213ENST00000497947 EHBP1L1Q8N3D4 1523 aa12.49□□□□□ -0.41
LMO7-213ENST00000497947 NPATQ14207 1427 aa12.49□□□□□ -0.41
LMO7-213ENST00000497947 ZNF335Q9H4Z2 1342 aaPredicted RBP12.49□□□□□ -0.41
LMO7-213ENST00000497947 PKD2Q13563 968 aa12.49□□□□□ -0.41
LMO7-213ENST00000497947 SIN3AQ96ST3 1273 aa12.49□□□□□ -0.41
LMO7-213ENST00000497947 PTPN23Q9H3S7 1636 aa12.48□□□□□ -0.41
LMO7-213ENST00000497947 DIP2CQ9Y2E4 1556 aa12.48□□□□□ -0.41
LMO7-213ENST00000497947 ARHGAP5Q13017 1502 aa12.48□□□□□ -0.41
LMO7-213ENST00000497947 MTUS2Q5JR59 1369 aa12.48□□□□□ -0.41
LMO7-213ENST00000497947 C3P01024 1663 aa12.48□□□□□ -0.41
LMO7-213ENST00000497947 MYOM3Q5VTT5 1437 aa12.47□□□□□ -0.41
LMO7-213ENST00000497947 NCKAP5LQ9HCH0 1330 aa12.47□□□□□ -0.41
LMO7-213ENST00000497947 TROQ12816 1431 aaPredicted RBP12.46□□□□□ -0.41
LMO7-213ENST00000497947 KIF14Q15058 1648 aa12.46□□□□□ -0.41
LMO7-213ENST00000497947 ZMYM3Q14202 1370 aa12.45□□□□□ -0.42
LMO7-213ENST00000497947 CAMSAP1Q5T5Y3 1602 aa12.45□□□□□ -0.42
LMO7-213ENST00000497947 SUPT6HQ7KZ85 1726 aaKnown RBP12.45□□□□□ -0.42
LMO7-213ENST00000497947 NAIPQ13075 1403 aa12.44□□□□□ -0.42
LMO7-213ENST00000497947 PLA2R1Q13018 1463 aa12.43□□□□□ -0.42
LMO7-213ENST00000497947 TCOF1Q13428 1488 aaKnown RBP12.43□□□□□ -0.42
LMO7-213ENST00000497947 SPDYE2BA6NHP3 402 aa12.43□□□□□ -0.42
LMO7-213ENST00000497947 SPDYE6P0CI01 402 aa12.43□□□□□ -0.42
LMO7-213ENST00000497947 SPDYE2Q495Y8 402 aa12.43□□□□□ -0.42
LMO7-213ENST00000497947 ABCA6Q8N139 1617 aa12.43□□□□□ -0.42
LMO7-213ENST00000497947 NCOA2Q15596 1464 aa12.42□□□□□ -0.42
LMO7-213ENST00000497947 TOM1O60784 492 aa12.42□□□□□ -0.42
LMO7-213ENST00000497947 HSPA1LP34931 641 aa12.42□□□□□ -0.42
LMO7-213ENST00000497947 RBM42Q9BTD8 480 aaKnown RBP12.42□□□□□ -0.42
LMO7-213ENST00000497947 GCC2Q8IWJ2 1684 aa12.39□□□□□ -0.43
LMO7-213ENST00000497947 MIA2Q96PC5 1412 aa12.39□□□□□ -0.43
LMO7-213ENST00000497947 PIP4K2BP78356 416 aa12.38□□□□□ -0.43
LMO7-213ENST00000497947 SSUH2Q9Y2M2 353 aa12.38□□□□□ -0.43
LMO7-213ENST00000497947 RBM19Q9Y4C8 960 aaKnown RBP12.38□□□□□ -0.43
LMO7-213ENST00000497947 SPAG9O60271 1321 aaKnown RBP12.37□□□□□ -0.43
LMO7-213ENST00000497947 ABCC1P33527 1531 aa12.37□□□□□ -0.43
LMO7-213ENST00000497947 SPDYE4A6NLX3 237 aa12.37□□□□□ -0.43
LMO7-213ENST00000497947 MROH2AA6NES4 1674 aa12.37□□□□□ -0.43
LMO7-213ENST00000497947 FANCIQ9NVI1 1328 aa12.37□□□□□ -0.43
LMO7-213ENST00000497947 KIDINS220Q9ULH0 1771 aa12.36□□□□□ -0.43
LMO7-213ENST00000497947 BCANQ96GW7 911 aa12.36□□□□□ -0.43
LMO7-213ENST00000497947 PTPRKQ15262 1439 aa12.36□□□□□ -0.43
LMO7-213ENST00000497947 MED1Q15648 1581 aaPredicted RBP12.35□□□□□ -0.43
LMO7-213ENST00000497947 CDC42BPBQ9Y5S2 1711 aa12.35□□□□□ -0.43
LMO7-213ENST00000497947 EIF4G2P78344 907 aaKnown RBP eCLIP12.34□□□□□ -0.43
LMO7-213ENST00000497947 GGT6Q6P531 493 aa12.34□□□□□ -0.43
LMO7-213ENST00000497947 ZNF692Q9BU19 519 aaPredicted RBP12.34□□□□□ -0.43
LMO7-213ENST00000497947 ZNF777Q9ULD5 760 aaPredicted RBP12.34□□□□□ -0.43
LMO7-213ENST00000497947 CEP170BQ9Y4F5 1589 aaPredicted RBP12.34□□□□□ -0.43
LMO7-213ENST00000497947 TRIM52Q96A61 297 aa12.33□□□□□ -0.44
LMO7-213ENST00000497947 PREX2Q70Z35 1606 aa12.33□□□□□ -0.44
LMO7-213ENST00000497947 ITSN2Q9NZM3 1697 aa12.32□□□□□ -0.44
LMO7-213ENST00000497947 CPS1P31327 1500 aa12.32□□□□□ -0.44
LMO7-213ENST00000497947 ROCK1Q13464 1354 aa12.32□□□□□ -0.44
LMO7-213ENST00000497947 HNRNPMP52272 730 aaKnown RBP eCLIP12.32□□□□□ -0.447e-6■□□□□ 9.7
LMO7-213ENST00000497947 ZNF142P52746 1687 aaPredicted RBP12.32□□□□□ -0.44
LMO7-213ENST00000497947 SAMD9LQ8IVG5 1584 aa12.31□□□□□ -0.44
LMO7-213ENST00000497947 MYO3AQ8NEV4 1616 aa12.3□□□□□ -0.44
LMO7-213ENST00000497947 KIAA1107Q9UPP5 1409 aa12.3□□□□□ -0.44
LMO7-213ENST00000497947 A2ML1A8K2U0 1454 aa12.3□□□□□ -0.44
LMO7-213ENST00000497947 A2MP01023 1474 aa12.3□□□□□ -0.44
LMO7-213ENST00000497947 PLEKHH2Q8IVE3 1493 aa12.3□□□□□ -0.44
LMO7-213ENST00000497947 SHANK2Q9UPX8 1470 aa12.3□□□□□ -0.44
LMO7-213ENST00000497947 HNRNPUQ00839 825 aaKnown RBP eCLIP12.3□□□□□ -0.44
LMO7-213ENST00000497947 PPP4R2Q9NY27 417 aa12.3□□□□□ -0.44
LMO7-213ENST00000497947 ANKLE2Q86XL3 938 aa12.29□□□□□ -0.44
LMO7-213ENST00000497947 PROM2Q8N271 834 aa12.29□□□□□ -0.44
LMO7-213ENST00000497947 AKT1S1Q96B36 256 aa12.29□□□□□ -0.44
LMO7-213ENST00000497947 HSPA5P11021 654 aaKnown RBP12.28□□□□□ -0.44
LMO7-213ENST00000497947 CLTCQ00610 1675 aaKnown RBP12.27□□□□□ -0.45
LMO7-213ENST00000497947 THEMISQ8N1K5 641 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms